RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 PLCD3Q8N3E9 789 aa7.94□□□□□ -1.14
DMD-228ENST00000541735 ELL2O00472 640 aaPredicted RBP7.93□□□□□ -1.14
DMD-228ENST00000541735 C1orf141Q5JVX7 400 aa7.93□□□□□ -1.14
DMD-228ENST00000541735 SIN3AQ96ST3 1273 aa7.93□□□□□ -1.14
DMD-228ENST00000541735 TPD52L1Q16890 204 aaPredicted RBP7.93□□□□□ -1.14
DMD-228ENST00000541735 GZF1Q9H116 711 aaPredicted RBP7.93□□□□□ -1.14
DMD-228ENST00000541735 KIF3BO15066 747 aa7.92□□□□□ -1.14
DMD-228ENST00000541735 AMOTL1Q8IY63 956 aa7.92□□□□□ -1.14
DMD-228ENST00000541735 GPATCH3Q96I76 525 aa7.92□□□□□ -1.14
DMD-228ENST00000541735 FOSBP53539 338 aa7.92□□□□□ -1.14
DMD-228ENST00000541735 PSME1Q06323 249 aa7.92□□□□□ -1.14
DMD-228ENST00000541735 CCDC27Q2M243 656 aa7.92□□□□□ -1.14
DMD-228ENST00000541735 STRN4Q9NRL3 753 aa7.92□□□□□ -1.14
DMD-228ENST00000541735 AKAP17AQ02040 695 aaKnown RBP7.91□□□□□ -1.14
DMD-228ENST00000541735 CCDC146Q8IYE0 955 aa7.91□□□□□ -1.14
DMD-228ENST00000541735 TTC5Q8N0Z6 440 aa7.91□□□□□ -1.14
DMD-228ENST00000541735 CHMP4BQ9H444 224 aaKnown RBP7.91□□□□□ -1.14
DMD-228ENST00000541735 SPDYE4A6NLX3 237 aa7.91□□□□□ -1.14
DMD-228ENST00000541735 MIER1Q8N108 512 aa7.91□□□□□ -1.14
DMD-228ENST00000541735 PCMTD1Q96MG8 357 aaPredicted RBP7.91□□□□□ -1.14
DMD-228ENST00000541735 WASHC2CQ9Y4E1 1318 aa7.91□□□□□ -1.14
DMD-228ENST00000541735 CLUAP1Q96AJ1 413 aa7.9□□□□□ -1.14
DMD-228ENST00000541735 ECM2O94769 699 aaPredicted RBP7.9□□□□□ -1.14
DMD-228ENST00000541735 R3HCC1Q9Y3T6 440 aaKnown RBP7.9□□□□□ -1.14
DMD-228ENST00000541735 ATF3P18847 181 aa7.9□□□□□ -1.15
DMD-228ENST00000541735 SF3A1Q15459 793 aaKnown RBP7.9□□□□□ -1.15
DMD-228ENST00000541735 ZFYVE27Q5T4F4 411 aa7.9□□□□□ -1.15
DMD-228ENST00000541735 CHMP4CQ96CF2 233 aa7.89□□□□□ -1.15
DMD-228ENST00000541735 ATP2B2Q01814 1243 aa7.89□□□□□ -1.15
DMD-228ENST00000541735 RILPL2Q969X0 211 aa7.89□□□□□ -1.15
DMD-228ENST00000541735 STK11IPQ8N1F8 1099 aa7.89□□□□□ -1.15
DMD-228ENST00000541735 TRAK1Q9UPV9 953 aa7.89□□□□□ -1.15
DMD-228ENST00000541735 CCNB3Q8WWL7 1395 aa7.88□□□□□ -1.15
DMD-228ENST00000541735 CCAR2Q8N163 923 aaKnown RBP7.88□□□□□ -1.15
DMD-228ENST00000541735 RBM5P52756 815 aaKnown RBP eCLIP7.88□□□□□ -1.15
DMD-228ENST00000541735 MCTP1Q6DN14 999 aa7.88□□□□□ -1.15
DMD-228ENST00000541735 MS4A1P11836 297 aa7.88□□□□□ -1.15
DMD-228ENST00000541735 RRP7AQ9Y3A4 280 aaKnown RBP7.88□□□□□ -1.15
DMD-228ENST00000541735 RSF1Q96T23 1441 aaPredicted RBP7.88□□□□□ -1.15
DMD-228ENST00000541735 MSNP26038 577 aaKnown RBP7.87□□□□□ -1.15
DMD-228ENST00000541735 AIMP1Q12904 312 aaKnown RBP7.87□□□□□ -1.15
DMD-228ENST00000541735 CCDC97Q96F63 343 aaPredicted RBP7.87□□□□□ -1.15
DMD-228ENST00000541735 TPM4P67936 248 aa7.87□□□□□ -1.15
DMD-228ENST00000541735 MFAP1P55081 439 aaKnown RBP7.86□□□□□ -1.15
DMD-228ENST00000541735 AK7Q96M32 723 aa7.86□□□□□ -1.15
DMD-228ENST00000541735 RBM42Q9BTD8 480 aaKnown RBP7.86□□□□□ -1.15
DMD-228ENST00000541735 TEFQ10587 303 aa7.86□□□□□ -1.15
DMD-228ENST00000541735 SMC4Q9NTJ3 1288 aa7.86□□□□□ -1.15
DMD-228ENST00000541735 WWC3Q9ULE0 1092 aa7.86□□□□□ -1.15
DMD-228ENST00000541735 BCL11BQ9C0K0 894 aaPredicted RBP7.86□□□□□ -1.15
DMD-228ENST00000541735 H3BQV1 296 aa7.85□□□□□ -1.15
DMD-228ENST00000541735 IFFO2Q5TF58 517 aa7.85□□□□□ -1.15
DMD-228ENST00000541735 WWC2Q6AWC2 1192 aa7.85□□□□□ -1.15
DMD-228ENST00000541735 ZNF219Q9P2Y4 722 aaPredicted RBP7.85□□□□□ -1.15
DMD-228ENST00000541735 HNRNPMP52272 730 aaKnown RBP eCLIP7.85□□□□□ -1.15
DMD-228ENST00000541735 SLKQ9H2G2 1235 aaPredicted RBP7.85□□□□□ -1.15
DMD-228ENST00000541735 TPM3P06753 285 aa7.85□□□□□ -1.15
DMD-228ENST00000541735 SYNE3Q6ZMZ3 975 aa7.85□□□□□ -1.15
DMD-228ENST00000541735 ODF2Q5BJF6 829 aa7.84□□□□□ -1.15
DMD-228ENST00000541735 CT47A1Q5JQC4 288 aaPredicted RBP7.84□□□□□ -1.15
DMD-228ENST00000541735 NFXL1Q6ZNB6 911 aa7.84□□□□□ -1.15
DMD-228ENST00000541735 CA8P35219 290 aa7.84□□□□□ -1.15
DMD-228ENST00000541735 TTLL12Q14166 644 aaPredicted RBP7.84□□□□□ -1.15
DMD-228ENST00000541735 NLRP2Q9NX02 1062 aa7.84□□□□□ -1.15
DMD-228ENST00000541735 IPO8O15397 1037 aaKnown RBP7.84□□□□□ -1.16
DMD-228ENST00000541735 CCDC34Q96HJ3 373 aa7.84□□□□□ -1.16
DMD-228ENST00000541735 C9orf78Q9NZ63 289 aaPredicted RBP7.83□□□□□ -1.16
DMD-228ENST00000541735 MINK1Q8N4C8 1332 aaPredicted RBP7.83□□□□□ -1.16
DMD-228ENST00000541735 TMEM87AQ8NBN3 555 aa7.83□□□□□ -1.16
DMD-228ENST00000541735 PKD2Q13563 968 aa7.83□□□□□ -1.16
DMD-228ENST00000541735 FAM184AQ8NB25 1140 aa7.83□□□□□ -1.16
DMD-228ENST00000541735 FAM69CQ0P6D2 419 aa7.82□□□□□ -1.16
DMD-228ENST00000541735 HTATSF1O43719 755 aaKnown RBP7.82□□□□□ -1.16
DMD-228ENST00000541735 BICDL1Q6ZP65 573 aa7.82□□□□□ -1.16
DMD-228ENST00000541735 BCL2L13Q9BXK5 485 aa7.82□□□□□ -1.16
DMD-228ENST00000541735 GOLGA6L1Q8N7Z2 621 aa7.82□□□□□ -1.16
DMD-228ENST00000541735 TSR1Q2NL82 804 aaKnown RBP7.81□□□□□ -1.16
DMD-228ENST00000541735 TTC16Q8NEE8 873 aa7.81□□□□□ -1.16
DMD-228ENST00000541735 CLIP1P30622 1438 aa7.81□□□□□ -1.16
DMD-228ENST00000541735 NAP1L1P55209 391 aaKnown RBP7.81□□□□□ -1.16
DMD-228ENST00000541735 NEUROD6Q96NK8 337 aa7.81□□□□□ -1.16
DMD-228ENST00000541735 SKIDA1Q1XH10 827 aa7.81□□□□□ -1.16
DMD-228ENST00000541735 TERF2IPQ9NYB0 399 aa7.81□□□□□ -1.16
DMD-228ENST00000541735 KIF16BQ96L93 1317 aa7.8□□□□□ -1.16
DMD-228ENST00000541735 WDR78Q5VTH9 848 aa7.8□□□□□ -1.16
DMD-228ENST00000541735 DDX54Q8TDD1 881 aaKnown RBP7.8□□□□□ -1.16
DMD-228ENST00000541735 PODXL2Q9NZ53 605 aa7.8□□□□□ -1.16
DMD-228ENST00000541735 TPM2P07951 284 aa7.8□□□□□ -1.16
DMD-228ENST00000541735 NEXNQ0ZGT2 675 aa7.8□□□□□ -1.16
DMD-228ENST00000541735 CALD1Q05682 793 aaKnown RBP7.8□□□□□ -1.16
DMD-228ENST00000541735 PPP4R2Q9NY27 417 aa7.8□□□□□ -1.16
DMD-228ENST00000541735 ROCK2O75116 1388 aaKnown RBP7.79□□□□□ -1.16
DMD-228ENST00000541735 COG3Q96JB2 828 aa7.79□□□□□ -1.16
DMD-228ENST00000541735 TRIM29Q14134 588 aa7.79□□□□□ -1.16
DMD-228ENST00000541735 ZSCAN29Q8IWY8 852 aaPredicted RBP7.79□□□□□ -1.16
DMD-228ENST00000541735 MPHOSPH10O00566 681 aaKnown RBP7.78□□□□□ -1.16
DMD-228ENST00000541735 HMMRO75330 724 aa7.78□□□□□ -1.16
DMD-228ENST00000541735 ERICH2A1L162 156 aa7.78□□□□□ -1.16
DMD-228ENST00000541735 WASHC4Q2M389 1173 aa7.78□□□□□ -1.16
DMD-228ENST00000541735 RAPGEF4Q8WZA2 1011 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms