RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 SHANK2Q9UPX8 1470 aa19.88■□□□□ 0.77
AC005840.4-201ENST00000541242 EXOC6Q8TAG9 804 aa19.87■□□□□ 0.77
AC005840.4-201ENST00000541242 CDC42BPBQ9Y5S2 1711 aa19.87■□□□□ 0.77
AC005840.4-201ENST00000541242 KIAA1107Q9UPP5 1409 aa19.87■□□□□ 0.77
AC005840.4-201ENST00000541242 MBD5Q9P267 1494 aa19.87■□□□□ 0.77
AC005840.4-201ENST00000541242 TSPY4P0CV99 314 aa19.86■□□□□ 0.77
AC005840.4-201ENST00000541242 TSPY10P0CW01 314 aa19.86■□□□□ 0.77
AC005840.4-201ENST00000541242 PDE4AP27815 886 aa19.86■□□□□ 0.77
AC005840.4-201ENST00000541242 SAMD9LQ8IVG5 1584 aa19.85■□□□□ 0.77
AC005840.4-201ENST00000541242 PREX2Q70Z35 1606 aa19.83■□□□□ 0.77
AC005840.4-201ENST00000541242 CLASP1Q7Z460 1538 aa19.83■□□□□ 0.77
AC005840.4-201ENST00000541242 ARHGEF5Q12774 1597 aa19.83■□□□□ 0.76
AC005840.4-201ENST00000541242 BCORL1Q5H9F3 1711 aa19.83■□□□□ 0.76
AC005840.4-201ENST00000541242 NUP155O75694 1391 aa19.82■□□□□ 0.76
AC005840.4-201ENST00000541242 KIF15Q9NS87 1388 aa19.82■□□□□ 0.76
AC005840.4-201ENST00000541242 PNISRQ8TF01 805 aaKnown RBP19.82■□□□□ 0.76
AC005840.4-201ENST00000541242 BRPF3Q9ULD4 1205 aa19.82■□□□□ 0.76
AC005840.4-201ENST00000541242 TTC37Q6PGP7 1564 aa19.81■□□□□ 0.76
AC005840.4-201ENST00000541242 SKAP1Q86WV1 359 aa19.81■□□□□ 0.76
AC005840.4-201ENST00000541242 ABCC2Q92887 1545 aa19.8■□□□□ 0.76
AC005840.4-201ENST00000541242 ZNF326Q5BKZ1 582 aaKnown RBP19.8■□□□□ 0.76
AC005840.4-201ENST00000541242 BACH2Q9BYV9 841 aa19.8■□□□□ 0.76
AC005840.4-201ENST00000541242 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.8■□□□□ 0.76
AC005840.4-201ENST00000541242 WASHC2CQ9Y4E1 1318 aa19.79■□□□□ 0.76
AC005840.4-201ENST00000541242 RRP1P56182 461 aaKnown RBP19.79■□□□□ 0.76
AC005840.4-201ENST00000541242 TMC1Q8TDI8 760 aa19.79■□□□□ 0.76
AC005840.4-201ENST00000541242 TCERG1O14776 1098 aaKnown RBP19.79■□□□□ 0.76
AC005840.4-201ENST00000541242 USP35Q9P2H5 1018 aa19.78■□□□□ 0.76
AC005840.4-201ENST00000541242 CCDC141Q6ZP82 1450 aa19.78■□□□□ 0.76
AC005840.4-201ENST00000541242 SYCP2Q9BX26 1530 aa19.76■□□□□ 0.75
AC005840.4-201ENST00000541242 ARHGAP5Q13017 1502 aa19.75■□□□□ 0.75
AC005840.4-201ENST00000541242 KDM5DQ9BY66 1539 aa19.74■□□□□ 0.75
AC005840.4-201ENST00000541242 PPM1GO15355 546 aaPredicted RBP19.73■□□□□ 0.75
AC005840.4-201ENST00000541242 SLC4A3P48751 1232 aa19.72■□□□□ 0.75
AC005840.4-201ENST00000541242 USP47Q96K76 1375 aa19.72■□□□□ 0.75
AC005840.4-201ENST00000541242 RSPH4AQ5TD94 716 aa19.71■□□□□ 0.75
AC005840.4-201ENST00000541242 RCAN3Q9UKA8 241 aa19.71■□□□□ 0.75
AC005840.4-201ENST00000541242 MYO5CQ9NQX4 1742 aa19.69■□□□□ 0.74
AC005840.4-201ENST00000541242 ZCCHC11Q5TAX3 1644 aaKnown RBP19.69■□□□□ 0.74
AC005840.4-201ENST00000541242 GSE1Q14687 1217 aa19.68■□□□□ 0.74
AC005840.4-201ENST00000541242 PLIN1O60240 522 aa19.68■□□□□ 0.74
AC005840.4-201ENST00000541242 ARHGEF12Q9NZN5 1544 aa19.68■□□□□ 0.74
AC005840.4-201ENST00000541242 UBE2Q2Q8WVN8 375 aa19.67■□□□□ 0.74
AC005840.4-201ENST00000541242 EIF5BO60841 1220 aaKnown RBP19.66■□□□□ 0.74
AC005840.4-201ENST00000541242 NFKBIBQ15653 356 aa19.66■□□□□ 0.74
AC005840.4-201ENST00000541242 MS4A1P11836 297 aa19.66■□□□□ 0.74
AC005840.4-201ENST00000541242 FAM135AQ9P2D6 1515 aa19.66■□□□□ 0.74
AC005840.4-201ENST00000541242 MAST1Q9Y2H9 1570 aa19.65■□□□□ 0.74
AC005840.4-201ENST00000541242 LRPPRCP42704 1394 aaKnown RBP19.65■□□□□ 0.74
AC005840.4-201ENST00000541242 UHRF1BP1LA0JNW5 1464 aa19.65■□□□□ 0.74
AC005840.4-201ENST00000541242 FRAT1Q92837 279 aaPredicted RBP19.65■□□□□ 0.74
AC005840.4-201ENST00000541242 CDCA7LQ96GN5 454 aa19.64■□□□□ 0.74
AC005840.4-201ENST00000541242 KDM5CP41229 1560 aa19.63■□□□□ 0.73
AC005840.4-201ENST00000541242 KDM2AQ9Y2K7 1162 aa19.63■□□□□ 0.73
AC005840.4-201ENST00000541242 PLCH2O75038 1416 aa19.63■□□□□ 0.73
AC005840.4-201ENST00000541242 UHRF1BP1Q6BDS2 1440 aa19.63■□□□□ 0.73
AC005840.4-201ENST00000541242 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.62■□□□□ 0.73
AC005840.4-201ENST00000541242 PLEKHH2Q8IVE3 1493 aa19.62■□□□□ 0.73
AC005840.4-201ENST00000541242 DCAF11Q8TEB1 546 aa19.59■□□□□ 0.73
AC005840.4-201ENST00000541242 UNC13BO14795 1591 aa19.59■□□□□ 0.73
AC005840.4-201ENST00000541242 EFCAB2Q5VUJ9 269 aa19.59■□□□□ 0.73
AC005840.4-201ENST00000541242 DDRGK1Q96HY6 314 aa19.59■□□□□ 0.73
AC005840.4-201ENST00000541242 PLXNC1O60486 1568 aa19.58■□□□□ 0.73
AC005840.4-201ENST00000541242 CRBNQ96SW2 442 aa19.58■□□□□ 0.73
AC005840.4-201ENST00000541242 MYBBP1AQ9BQG0 1328 aaKnown RBP19.58■□□□□ 0.73
AC005840.4-201ENST00000541242 RALGAPBQ86X10 1494 aa19.58■□□□□ 0.72
AC005840.4-201ENST00000541242 PLA2R1Q13018 1463 aa19.57■□□□□ 0.72
AC005840.4-201ENST00000541242 TRAPPC8Q9Y2L5 1435 aa19.57■□□□□ 0.72
AC005840.4-201ENST00000541242 BRD4O60885 1362 aaPredicted RBP19.57■□□□□ 0.72
AC005840.4-201ENST00000541242 CARD11Q9BXL7 1154 aa19.55■□□□□ 0.72
AC005840.4-201ENST00000541242 ABCC1P33527 1531 aa19.55■□□□□ 0.72
AC005840.4-201ENST00000541242 DUOX2Q9NRD8 1548 aa19.54■□□□□ 0.72
AC005840.4-201ENST00000541242 CCDC144AA2RUR9 1427 aa19.52■□□□□ 0.72
AC005840.4-201ENST00000541242 ST20-MTHFSA0A0A6YYL1 179 aa19.52■□□□□ 0.72
AC005840.4-201ENST00000541242 ARID4BQ4LE39 1312 aaPredicted RBP19.52■□□□□ 0.72
AC005840.4-201ENST00000541242 RGL3Q3MIN7 710 aa19.52■□□□□ 0.72
AC005840.4-201ENST00000541242 C20orf194Q5TEA3 1177 aa19.52■□□□□ 0.72
AC005840.4-201ENST00000541242 IQGAP3Q86VI3 1631 aa19.52■□□□□ 0.72
AC005840.4-201ENST00000541242 ROCK2O75116 1388 aaKnown RBP19.52■□□□□ 0.72
AC005840.4-201ENST00000541242 FRAT2O75474 233 aaPredicted RBP19.51■□□□□ 0.71
AC005840.4-201ENST00000541242 DAXXQ9UER7 740 aaPredicted RBP19.51■□□□□ 0.71
AC005840.4-201ENST00000541242 AFAP1Q8N556 730 aa19.5■□□□□ 0.71
AC005840.4-201ENST00000541242 RALBP1Q15311 655 aa19.5■□□□□ 0.71
AC005840.4-201ENST00000541242 ERBINQ96RT1 1412 aa19.49■□□□□ 0.71
AC005840.4-201ENST00000541242 MAGI2Q86UL8 1455 aa19.48■□□□□ 0.71
AC005840.4-201ENST00000541242 PDE3BQ13370 1112 aa19.47■□□□□ 0.71
AC005840.4-201ENST00000541242 WDR7Q9Y4E6 1490 aa19.46■□□□□ 0.71
AC005840.4-201ENST00000541242 PRAG1Q86YV5 1406 aa19.46■□□□□ 0.71
AC005840.4-201ENST00000541242 E9PCH4 1651 aa19.46■□□□□ 0.71
AC005840.4-201ENST00000541242 CYB5RLQ6IPT4 315 aa19.46■□□□□ 0.71
AC005840.4-201ENST00000541242 SPAG9O60271 1321 aaKnown RBP19.46■□□□□ 0.71
AC005840.4-201ENST00000541242 A2MP01023 1474 aa19.46■□□□□ 0.71
AC005840.4-201ENST00000541242 NBPF1Q3BBV0 1214 aa19.45■□□□□ 0.7
AC005840.4-201ENST00000541242 NLRP13Q86W25 1043 aa19.45■□□□□ 0.7
AC005840.4-201ENST00000541242 TRPM1Q7Z4N2 1603 aa19.43■□□□□ 0.7
AC005840.4-201ENST00000541242 ARAP3Q8WWN8 1544 aa19.43■□□□□ 0.7
AC005840.4-201ENST00000541242 C8orf34Q49A92 452 aa19.43■□□□□ 0.7
AC005840.4-201ENST00000541242 KDM2BQ8NHM5 1336 aa19.42■□□□□ 0.7
AC005840.4-201ENST00000541242 ZFYVE16Q7Z3T8 1539 aa19.42■□□□□ 0.7
AC005840.4-201ENST00000541242 ATP10AO60312 1499 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms