RNA–Protein interactions for RNA: ENST00000540122.5

PUDP-206, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2 BASIC

Gene PUDP, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-206ENST00000540122 CASKIN1Q8WXD9 1431 aa25.67■■□□□ 1.7
PUDP-206ENST00000540122 ANKLE2Q86XL3 938 aa25.65■■□□□ 1.7
PUDP-206ENST00000540122 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.65■■□□□ 1.7
PUDP-206ENST00000540122 FBXO31Q5XUX0 539 aaPredicted RBP25.64■■□□□ 1.7
PUDP-206ENST00000540122 PLEKHH2Q8IVE3 1493 aa25.64■■□□□ 1.69
PUDP-206ENST00000540122 NPHP4O75161 1426 aaPredicted RBP25.63■■□□□ 1.69
PUDP-206ENST00000540122 MED14O60244 1454 aa25.62■■□□□ 1.69
PUDP-206ENST00000540122 ADGBQ8N7X0 1667 aa25.61■■□□□ 1.69
PUDP-206ENST00000540122 LRRC7Q96NW7 1537 aa25.6■■□□□ 1.69
PUDP-206ENST00000540122 RNF17Q9BXT8 1623 aaKnown RBP25.59■■□□□ 1.69
PUDP-206ENST00000540122 PZPP20742 1482 aa25.59■■□□□ 1.69
PUDP-206ENST00000540122 CFDP1Q9UEE9 299 aaPredicted RBP25.58■■□□□ 1.69
PUDP-206ENST00000540122 DEPDC5O75140 1603 aa25.58■■□□□ 1.69
PUDP-206ENST00000540122 THEMISQ8N1K5 641 aaPredicted RBP25.57■■□□□ 1.68
PUDP-206ENST00000540122 STRCP1A6NGW2 1772 aa25.54■■□□□ 1.68
PUDP-206ENST00000540122 SYNMO15061 1565 aa25.54■■□□□ 1.68
PUDP-206ENST00000540122 IQGAP1P46940 1657 aa25.54■■□□□ 1.68
PUDP-206ENST00000540122 NLRP1Q9C000 1473 aa25.53■■□□□ 1.68
PUDP-206ENST00000540122 UGGT1Q9NYU2 1555 aa25.53■■□□□ 1.68
PUDP-206ENST00000540122 KDM5DQ9BY66 1539 aa25.53■■□□□ 1.68
PUDP-206ENST00000540122 FAM135AQ9P2D6 1515 aa25.53■■□□□ 1.68
PUDP-206ENST00000540122 MIA2Q96PC5 1412 aa25.52■■□□□ 1.68
PUDP-206ENST00000540122 DHX29Q7Z478 1369 aaKnown RBP25.51■■□□□ 1.67
PUDP-206ENST00000540122 CCNB3Q8WWL7 1395 aa25.51■■□□□ 1.67
PUDP-206ENST00000540122 FYCO1Q9BQS8 1478 aa25.51■■□□□ 1.67
PUDP-206ENST00000540122 POTEAQ6S8J7 498 aa25.5■■□□□ 1.67
PUDP-206ENST00000540122 RTEL1-TNFRSF6BF6WH68 1400 aa25.47■■□□□ 1.67
PUDP-206ENST00000540122 KIF3BO15066 747 aa25.47■■□□□ 1.67
PUDP-206ENST00000540122 MBD5Q9P267 1494 aa25.46■■□□□ 1.67
PUDP-206ENST00000540122 ZNF644Q9H582 1327 aaPredicted RBP25.45■■□□□ 1.66
PUDP-206ENST00000540122 WASHC2CQ9Y4E1 1318 aa25.45■■□□□ 1.66
PUDP-206ENST00000540122 ZC3H13Q5T200 1668 aaKnown RBP25.37■■□□□ 1.65
PUDP-206ENST00000540122 FAM135BQ49AJ0 1406 aa25.35■■□□□ 1.65
PUDP-206ENST00000540122 TIAM1Q13009 1591 aa25.35■■□□□ 1.65
PUDP-206ENST00000540122 SETD1AO15047 1707 aaKnown RBP25.34■■□□□ 1.65
PUDP-206ENST00000540122 MTUS2Q5JR59 1369 aa25.33■■□□□ 1.65
PUDP-206ENST00000540122 XIRP1Q702N8 1843 aaKnown RBP25.3■■□□□ 1.64
PUDP-206ENST00000540122 CCDC141Q6ZP82 1450 aa25.29■■□□□ 1.64
PUDP-206ENST00000540122 SCAF11Q99590 1463 aaKnown RBP25.29■■□□□ 1.64
PUDP-206ENST00000540122 ERVK-7P63135 1459 aa25.27■■□□□ 1.64
PUDP-206ENST00000540122 ABCC3O15438 1527 aa25.25■■□□□ 1.63
PUDP-206ENST00000540122 UBR1Q8IWV7 1749 aa25.23■■□□□ 1.63
PUDP-206ENST00000540122 LTKP29376 864 aa25.23■■□□□ 1.63
PUDP-206ENST00000540122 NCOA2Q15596 1464 aa25.22■■□□□ 1.63
PUDP-206ENST00000540122 ARHGAP23Q9P227 1491 aa25.21■■□□□ 1.63
PUDP-206ENST00000540122 ROBO1Q9Y6N7 1651 aa25.21■■□□□ 1.63
PUDP-206ENST00000540122 TXNDC2Q86VQ3 553 aa25.2■■□□□ 1.62
PUDP-206ENST00000540122 SLIT1O75093 1534 aa25.2■■□□□ 1.62
PUDP-206ENST00000540122 EHBP1L1Q8N3D4 1523 aa25.19■■□□□ 1.62
PUDP-206ENST00000540122 CAMSAP2Q08AD1 1489 aa25.19■■□□□ 1.62
PUDP-206ENST00000540122 TMEM94Q12767 1356 aa25.18■■□□□ 1.62
PUDP-206ENST00000540122 CEP162Q5TB80 1403 aa25.18■■□□□ 1.62
PUDP-206ENST00000540122 RSPH4AQ5TD94 716 aa25.17■■□□□ 1.62
PUDP-206ENST00000540122 UPF1Q92900 1129 aaKnown RBP eCLIP25.17■■□□□ 1.62
PUDP-206ENST00000540122 MAP3K1Q13233 1512 aa25.14■■□□□ 1.62
PUDP-206ENST00000540122 LRRC9Q6ZRR7 1453 aa25.13■■□□□ 1.61
PUDP-206ENST00000540122 EID1Q9Y6B2 187 aa25.12■■□□□ 1.61
PUDP-206ENST00000540122 JCADQ9P266 1359 aa25.1■■□□□ 1.61
PUDP-206ENST00000540122 ARHGEF5Q12774 1597 aa25.1■■□□□ 1.61
PUDP-206ENST00000540122 MROH1Q8NDA8 1641 aa25.09■■□□□ 1.61
PUDP-206ENST00000540122 TSPY4P0CV99 314 aa25.09■■□□□ 1.61
PUDP-206ENST00000540122 TSPY10P0CW01 314 aa25.09■■□□□ 1.61
PUDP-206ENST00000540122 RBM33Q96EV2 1170 aaKnown RBP25.08■■□□□ 1.61
PUDP-206ENST00000540122 KCNA6P17658 529 aa25.07■■□□□ 1.6
PUDP-206ENST00000540122 EIF2AK4Q9P2K8 1649 aaKnown RBP25.06■■□□□ 1.6
PUDP-206ENST00000540122 PROSER2Q86WR7 435 aaPredicted RBP25.06■■□□□ 1.6
PUDP-206ENST00000540122 PHLPP1O60346 1717 aa25.06■■□□□ 1.6
PUDP-206ENST00000540122 CEP152O94986 1710 aa25.06■■□□□ 1.6
PUDP-206ENST00000540122 TMEM2Q9UHN6 1383 aa25.05■■□□□ 1.6
PUDP-206ENST00000540122 TRIM52Q96A61 297 aa25.05■■□□□ 1.6
PUDP-206ENST00000540122 PRDM15P57071 1507 aaPredicted RBP25.03■■□□□ 1.6
PUDP-206ENST00000540122 LRP6O75581 1613 aa25.02■■□□□ 1.6
PUDP-206ENST00000540122 CFAP65Q6ZU64 1925 aaKnown RBP25.02■■□□□ 1.6
PUDP-206ENST00000540122 ZNF772Q68DY9 489 aaPredicted RBP25■■□□□ 1.59
PUDP-206ENST00000540122 SLAIN2Q9P270 581 aa25■■□□□ 1.59
PUDP-206ENST00000540122 MSH6P52701 1360 aa25■■□□□ 1.59
PUDP-206ENST00000540122 NKTRP30414 1462 aaKnown RBP25■■□□□ 1.59
PUDP-206ENST00000540122 MAST1Q9Y2H9 1570 aa25■■□□□ 1.59
PUDP-206ENST00000540122 PIK3C2BO00750 1634 aa25■■□□□ 1.59
PUDP-206ENST00000540122 ARHGAP31Q2M1Z3 1444 aa24.99■■□□□ 1.59
PUDP-206ENST00000540122 SLC26A8Q96RN1 970 aa24.99■■□□□ 1.59
PUDP-206ENST00000540122 COL16A1Q07092 1604 aaPredicted RBP24.98■■□□□ 1.59
PUDP-206ENST00000540122 TET3O43151 1660 aa24.97■■□□□ 1.59
PUDP-206ENST00000540122 NWD1Q149M9 1564 aa24.97■■□□□ 1.59
PUDP-206ENST00000540122 MEX3CQ5U5Q3 659 aaKnown RBP24.97■■□□□ 1.59
PUDP-206ENST00000540122 SRCAPQ6ZRS2 3230 aa24.96■■□□□ 1.59
PUDP-206ENST00000540122 SPATA31A6Q5VVP1 1343 aa24.96■■□□□ 1.59
PUDP-206ENST00000540122 STAG3Q9UJ98 1225 aa24.95■■□□□ 1.58
PUDP-206ENST00000540122 EFCAB6Q5THR3 1501 aa24.94■■□□□ 1.58
PUDP-206ENST00000540122 FGD6Q6ZV73 1430 aa24.94■■□□□ 1.58
PUDP-206ENST00000540122 RXRBP28702 533 aa24.91■■□□□ 1.58
PUDP-206ENST00000540122 KDM5AP29375 1690 aaKnown RBP24.9■■□□□ 1.58
PUDP-206ENST00000540122 DUOX2Q9NRD8 1548 aa24.89■■□□□ 1.57
PUDP-206ENST00000540122 CDK12Q9NYV4 1490 aaPredicted RBP24.89■■□□□ 1.57
PUDP-206ENST00000540122 IDI1Q13907 227 aa24.86■■□□□ 1.57
PUDP-206ENST00000540122 SHPRHQ149N8 1683 aa24.84■■□□□ 1.57
PUDP-206ENST00000540122 AHDC1Q5TGY3 1603 aaPredicted RBP24.82■■□□□ 1.56
PUDP-206ENST00000540122 BCANQ96GW7 911 aa24.81■■□□□ 1.56
PUDP-206ENST00000540122 ERBINQ96RT1 1412 aa24.79■■□□□ 1.56
PUDP-206ENST00000540122 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms