RNA–Protein interactions for RNA: ENST00000539770.5

ARL6IP4-216, Transcript of ADP ribosylation factor like GTPase 6 interacting protein 4, humanhuman

TSL 1 (best)

Gene ARL6IP4, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARL6IP4-216ENST00000539770 KIF15Q9NS87 1388 aa34.41■■■■□ 3.1
ARL6IP4-216ENST00000539770 RNF17Q9BXT8 1623 aaKnown RBP34.41■■■■□ 3.1
ARL6IP4-216ENST00000539770 KDM5DQ9BY66 1539 aa34.4■■■■□ 3.1
ARL6IP4-216ENST00000539770 FAM50AQ14320 339 aaKnown RBP34.39■■■■□ 3.1
ARL6IP4-216ENST00000539770 NPATQ14207 1427 aa34.38■■■■□ 3.09
ARL6IP4-216ENST00000539770 UHRF1BP1Q6BDS2 1440 aa34.38■■■■□ 3.09
ARL6IP4-216ENST00000539770 ERBINQ96RT1 1412 aa34.35■■■■□ 3.09
ARL6IP4-216ENST00000539770 CERKQ8TCT0 537 aa34.34■■■■□ 3.09
ARL6IP4-216ENST00000539770 PPARGC1BQ86YN6 1023 aaKnown RBP34.33■■■■□ 3.09
ARL6IP4-216ENST00000539770 ANKRD30AQ9BXX3 1397 aa34.33■■■■□ 3.09
ARL6IP4-216ENST00000539770 ADGRL2O95490 1459 aa34.32■■■■□ 3.08
ARL6IP4-216ENST00000539770 SETD1BQ9UPS6 1966 aaKnown RBP34.31■■■■□ 3.08
ARL6IP4-216ENST00000539770 RRP7BPQ9NSQ0 103 aa34.3■■■■□ 3.08
ARL6IP4-216ENST00000539770 MROH1Q8NDA8 1641 aa34.3■■■■□ 3.08
ARL6IP4-216ENST00000539770 PTPRKQ15262 1439 aa34.3■■■■□ 3.08
ARL6IP4-216ENST00000539770 CHIC2Q9UKJ5 165 aa34.28■■■■□ 3.08
ARL6IP4-216ENST00000539770 ZC3H13Q5T200 1668 aaKnown RBP34.27■■■■□ 3.08
ARL6IP4-216ENST00000539770 NCOA1Q15788 1441 aa34.27■■■■□ 3.08
ARL6IP4-216ENST00000539770 WASHC2CQ9Y4E1 1318 aa34.27■■■■□ 3.08
ARL6IP4-216ENST00000539770 ABCC3O15438 1527 aa34.25■■■■□ 3.07
ARL6IP4-216ENST00000539770 PRDM15P57071 1507 aaPredicted RBP34.24■■■■□ 3.07
ARL6IP4-216ENST00000539770 PZPP20742 1482 aa34.23■■■■□ 3.07
ARL6IP4-216ENST00000539770 MYO3AQ8NEV4 1616 aa34.22■■■■□ 3.07
ARL6IP4-216ENST00000539770 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.2■■■■□ 3.07
ARL6IP4-216ENST00000539770 DEPDC5O75140 1603 aa34.19■■■■□ 3.06
ARL6IP4-216ENST00000539770 STRCQ7RTU9 1775 aa34.16■■■■□ 3.06
ARL6IP4-216ENST00000539770 ZNF142P52746 1687 aaPredicted RBP34.16■■■■□ 3.06
ARL6IP4-216ENST00000539770 DMRT2Q9Y5R5 561 aa34.14■■■■□ 3.06
ARL6IP4-216ENST00000539770 CEP152O94986 1710 aa34.13■■■■□ 3.05
ARL6IP4-216ENST00000539770 RRBP1Q9P2E9 1410 aaKnown RBP34.13■■■■□ 3.05
ARL6IP4-216ENST00000539770 CEP170BQ9Y4F5 1589 aaPredicted RBP34.12■■■■□ 3.05
ARL6IP4-216ENST00000539770 CAMSAP1Q5T5Y3 1602 aa34.12■■■■□ 3.05
ARL6IP4-216ENST00000539770 ROCK1Q13464 1354 aa34.11■■■■□ 3.05
ARL6IP4-216ENST00000539770 TNRQ92752 1358 aa34.11■■■■□ 3.05
ARL6IP4-216ENST00000539770 ANKRD50Q9ULJ7 1429 aa34.09■■■■□ 3.05
ARL6IP4-216ENST00000539770 FBXO31Q5XUX0 539 aaPredicted RBP34.08■■■■□ 3.05
ARL6IP4-216ENST00000539770 KANK1Q14678 1352 aa34.06■■■■□ 3.04
ARL6IP4-216ENST00000539770 A2ML1A8K2U0 1454 aa34.05■■■■□ 3.04
ARL6IP4-216ENST00000539770 VWDEQ8N2E2 1590 aa34.05■■■■□ 3.04
ARL6IP4-216ENST00000539770 SPATA31D1Q6ZQQ2 1576 aa34.03■■■■□ 3.04
ARL6IP4-216ENST00000539770 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.03■■■■□ 3.042e-7■■■□□ 14.9
ARL6IP4-216ENST00000539770 ERVK-7P63135 1459 aa34.02■■■■□ 3.04
ARL6IP4-216ENST00000539770 LMTK2Q8IWU2 1503 aa34.02■■■■□ 3.04
ARL6IP4-216ENST00000539770 PTPRTO14522 1441 aa34.02■■■■□ 3.04
ARL6IP4-216ENST00000539770 ITGAEP38570 1179 aa34.01■■■■□ 3.03
ARL6IP4-216ENST00000539770 ARHGAP31Q2M1Z3 1444 aa34.01■■■■□ 3.03
ARL6IP4-216ENST00000539770 NLRP1Q9C000 1473 aa34■■■■□ 3.03
ARL6IP4-216ENST00000539770 PLA2R1Q13018 1463 aa33.97■■■■□ 3.03
ARL6IP4-216ENST00000539770 UNC13BO14795 1591 aa33.94■■■■□ 3.02
ARL6IP4-216ENST00000539770 EFCAB6Q5THR3 1501 aa33.93■■■■□ 3.02
ARL6IP4-216ENST00000539770 IQSEC2Q5JU85 1478 aa33.91■■■■□ 3.02
ARL6IP4-216ENST00000539770 DISP3Q9P2K9 1392 aa33.91■■■■□ 3.02
ARL6IP4-216ENST00000539770 LTBP4Q8N2S1 1624 aa33.87■■■■□ 3.01
ARL6IP4-216ENST00000539770 UGGT1Q9NYU2 1555 aa33.87■■■■□ 3.01
ARL6IP4-216ENST00000539770 TET3O43151 1660 aa33.83■■■■□ 3.01
ARL6IP4-216ENST00000539770 SOCS7O14512 581 aa33.82■■■■□ 3
ARL6IP4-216ENST00000539770 ILDR2Q71H61 639 aa33.82■■■■□ 3
ARL6IP4-216ENST00000539770 NCKAP5LQ9HCH0 1330 aa33.81■■■■□ 3
ARL6IP4-216ENST00000539770 PKD2Q13563 968 aa33.81■■■■□ 3
ARL6IP4-216ENST00000539770 CFAP65Q6ZU64 1925 aaKnown RBP33.8■■■■□ 3
ARL6IP4-216ENST00000539770 RPRD2Q5VT52 1461 aaKnown RBP33.8■■■■□ 3
ARL6IP4-216ENST00000539770 IQGAP3Q86VI3 1631 aa33.79■■■■□ 3
ARL6IP4-216ENST00000539770 GCC2Q8IWJ2 1684 aa33.78■■■■□ 3
ARL6IP4-216ENST00000539770 THEMISQ8N1K5 641 aaPredicted RBP33.77■■■■□ 3
ARL6IP4-216ENST00000539770 POLR1AO95602 1720 aaPredicted RBP33.76■■■■□ 3
ARL6IP4-216ENST00000539770 NOS1P29475 1434 aa33.75■■■□□ 2.99
ARL6IP4-216ENST00000539770 NAIPQ13075 1403 aa33.75■■■□□ 2.99
ARL6IP4-216ENST00000539770 SYNMO15061 1565 aa33.75■■■□□ 2.99
ARL6IP4-216ENST00000539770 UBR1Q8IWV7 1749 aa33.74■■■□□ 2.99
ARL6IP4-216ENST00000539770 NEURL4Q96JN8 1562 aa33.72■■■□□ 2.99
ARL6IP4-216ENST00000539770 HFM1A2PYH4 1435 aa33.71■■■□□ 2.99
ARL6IP4-216ENST00000539770 NUP155O75694 1391 aa33.71■■■□□ 2.99
ARL6IP4-216ENST00000539770 PIK3C2BO00750 1634 aa33.7■■■□□ 2.99
ARL6IP4-216ENST00000539770 E9PCH4 1651 aa33.66■■■□□ 2.98
ARL6IP4-216ENST00000539770 ANKLE2Q86XL3 938 aa33.66■■■□□ 2.98
ARL6IP4-216ENST00000539770 KDM5AP29375 1690 aaKnown RBP33.65■■■□□ 2.98
ARL6IP4-216ENST00000539770 ADGRB3O60242 1522 aa33.62■■■□□ 2.97
ARL6IP4-216ENST00000539770 SLIT1O75093 1534 aa33.62■■■□□ 2.97
ARL6IP4-216ENST00000539770 MED14O60244 1454 aa33.62■■■□□ 2.97
ARL6IP4-216ENST00000539770 ARHGAP23Q9P227 1491 aa33.62■■■□□ 2.97
ARL6IP4-216ENST00000539770 IDI1Q13907 227 aa33.6■■■□□ 2.97
ARL6IP4-216ENST00000539770 SLC52A1Q9NWF4 448 aa33.59■■■□□ 2.97
ARL6IP4-216ENST00000539770 NPHP4O75161 1426 aaPredicted RBP33.59■■■□□ 2.97
ARL6IP4-216ENST00000539770 SCAF11Q99590 1463 aaKnown RBP33.57■■■□□ 2.97
ARL6IP4-216ENST00000539770 IQGAP1P46940 1657 aa33.56■■■□□ 2.96
ARL6IP4-216ENST00000539770 STAG3Q9UJ98 1225 aa33.56■■■□□ 2.96
ARL6IP4-216ENST00000539770 TMEM2Q9UHN6 1383 aa33.54■■■□□ 2.96
ARL6IP4-216ENST00000539770 ZNF335Q9H4Z2 1342 aaPredicted RBP33.53■■■□□ 2.96
ARL6IP4-216ENST00000539770 LTKP29376 864 aa33.46■■■□□ 2.95
ARL6IP4-216ENST00000539770 EID1Q9Y6B2 187 aa33.46■■■□□ 2.95
ARL6IP4-216ENST00000539770 SPHKAPQ2M3C7 1700 aa33.45■■■□□ 2.95
ARL6IP4-216ENST00000539770 TXNDC2Q86VQ3 553 aa33.45■■■□□ 2.95
ARL6IP4-216ENST00000539770 TMEM131LA2VDJ0 1609 aa33.45■■■□□ 2.95
ARL6IP4-216ENST00000539770 TRIM52Q96A61 297 aa33.42■■■□□ 2.94
ARL6IP4-216ENST00000539770 MYO5BQ9ULV0 1848 aa33.39■■■□□ 2.94
ARL6IP4-216ENST00000539770 CPS1P31327 1500 aa33.38■■■□□ 2.93
ARL6IP4-216ENST00000539770 UBAP1LF5GYI3 381 aa33.38■■■□□ 2.93
ARL6IP4-216ENST00000539770 TRPM2O94759 1503 aa33.38■■■□□ 2.93
ARL6IP4-216ENST00000539770 ZFYVE9O95405 1425 aa33.37■■■□□ 2.93
ARL6IP4-216ENST00000539770 RIMS2Q9UQ26 1411 aa33.34■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms