RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 ERCC6Q03468 1493 aa7.46□□□□□ -1.22
SNHG1-208ENST00000538266 PHF14O94880 888 aa7.45□□□□□ -1.22
SNHG1-208ENST00000538266 MARVELD3Q96A59 401 aa7.45□□□□□ -1.22
SNHG1-208ENST00000538266 PDS5BQ9NTI5 1447 aa7.44□□□□□ -1.22
SNHG1-208ENST00000538266 PRDM2Q13029 1718 aa7.44□□□□□ -1.22
SNHG1-208ENST00000538266 OSBPP22059 807 aa7.44□□□□□ -1.22
SNHG1-208ENST00000538266 ZNF454Q8N9F8 522 aa7.44□□□□□ -1.22
SNHG1-208ENST00000538266 EPAS1Q99814 870 aa7.44□□□□□ -1.22
SNHG1-208ENST00000538266 PCDHGA10Q9Y5H3 936 aa7.44□□□□□ -1.22
SNHG1-208ENST00000538266 ERBB3P21860 1342 aa7.44□□□□□ -1.22
SNHG1-208ENST00000538266 FOSBP53539 338 aa7.43□□□□□ -1.22
SNHG1-208ENST00000538266 RBM26Q5T8P6 1007 aaKnown RBP7.43□□□□□ -1.22
SNHG1-208ENST00000538266 PSDA5PKW4 1024 aaPredicted RBP7.42□□□□□ -1.22
SNHG1-208ENST00000538266 EMP3P54852 163 aa7.42□□□□□ -1.22
SNHG1-208ENST00000538266 TYW1BQ6NUM6 668 aa7.42□□□□□ -1.22
SNHG1-208ENST00000538266 LMOD2Q6P5Q4 547 aa7.42□□□□□ -1.22
SNHG1-208ENST00000538266 JPH4Q96JJ6 628 aa7.42□□□□□ -1.22
SNHG1-208ENST00000538266 FAM205CA6NFA0 338 aa7.41□□□□□ -1.22
SNHG1-208ENST00000538266 FBXW7Q969H0 707 aa7.41□□□□□ -1.22
SNHG1-208ENST00000538266 ZDHHC16Q969W1 377 aa7.41□□□□□ -1.22
SNHG1-208ENST00000538266 RBM33Q96EV2 1170 aaKnown RBP7.41□□□□□ -1.22
SNHG1-208ENST00000538266 FANCD2Q9BXW9 1451 aa7.41□□□□□ -1.22
SNHG1-208ENST00000538266 CEP164Q9UPV0 1460 aa7.41□□□□□ -1.22
SNHG1-208ENST00000538266 KIF21AQ7Z4S6 1674 aa7.41□□□□□ -1.22
SNHG1-208ENST00000538266 PPP4R3BQ5MIZ7 849 aa7.4□□□□□ -1.22
SNHG1-208ENST00000538266 LCE2DQ5TA82 110 aaPredicted RBP7.4□□□□□ -1.22
SNHG1-208ENST00000538266 NUTM2FA1L443 756 aa7.39□□□□□ -1.23
SNHG1-208ENST00000538266 MAP3K7O43318 606 aa7.39□□□□□ -1.23
SNHG1-208ENST00000538266 PRIM1P49642 420 aaKnown RBP7.39□□□□□ -1.23
SNHG1-208ENST00000538266 VARS2Q5ST30 1063 aaKnown RBP7.39□□□□□ -1.23
SNHG1-208ENST00000538266 EN1Q05925 392 aaPredicted RBP7.38□□□□□ -1.23
SNHG1-208ENST00000538266 ADAM33Q9BZ11 813 aa7.38□□□□□ -1.23
SNHG1-208ENST00000538266 C6orf132Q5T0Z8 1188 aa7.37□□□□□ -1.23
SNHG1-208ENST00000538266 MRC2Q9UBG0 1479 aa7.36□□□□□ -1.23
SNHG1-208ENST00000538266 TSR1Q2NL82 804 aaKnown RBP7.36□□□□□ -1.23
SNHG1-208ENST00000538266 TPRNQ4KMQ1 711 aa7.35□□□□□ -1.23
SNHG1-208ENST00000538266 GPIHBP1Q8IV16 184 aa7.35□□□□□ -1.23
SNHG1-208ENST00000538266 HS3ST6Q96QI5 342 aa7.35□□□□□ -1.23
SNHG1-208ENST00000538266 BCL2L12Q9HB09 334 aa7.35□□□□□ -1.23
SNHG1-208ENST00000538266 THOC2Q8NI27 1593 aaKnown RBP7.34□□□□□ -1.23
SNHG1-208ENST00000538266 POTEB3A0JP26 581 aa7.34□□□□□ -1.23
SNHG1-208ENST00000538266 PTPREP23469 700 aa7.34□□□□□ -1.23
SNHG1-208ENST00000538266 POTEBQ6S5H4 581 aa7.34□□□□□ -1.23
SNHG1-208ENST00000538266 ZNF687Q8N1G0 1237 aa7.34□□□□□ -1.23
SNHG1-208ENST00000538266 ZC3H15Q8WU90 426 aaKnown RBP7.34□□□□□ -1.23
SNHG1-208ENST00000538266 WDR62O43379 1518 aa7.32□□□□□ -1.24
SNHG1-208ENST00000538266 FCHSD2O94868 740 aa7.32□□□□□ -1.24
SNHG1-208ENST00000538266 KCNH8Q96L42 1107 aa7.32□□□□□ -1.24
SNHG1-208ENST00000538266 CDHR5Q9HBB8 845 aa7.32□□□□□ -1.24
SNHG1-208ENST00000538266 NPDC1Q9NQX5 325 aaPredicted RBP7.32□□□□□ -1.24
SNHG1-208ENST00000538266 ABCC8Q09428 1581 aa7.32□□□□□ -1.24
SNHG1-208ENST00000538266 ARHGAP33O14559 1287 aa7.31□□□□□ -1.24
SNHG1-208ENST00000538266 PRKCSHP14314 528 aaPredicted RBP7.31□□□□□ -1.24
SNHG1-208ENST00000538266 PTGDRQ13258 359 aa7.31□□□□□ -1.24
SNHG1-208ENST00000538266 DNMBPQ6XZF7 1577 aa7.31□□□□□ -1.24
SNHG1-208ENST00000538266 CERKQ8TCT0 537 aa7.31□□□□□ -1.24
SNHG1-208ENST00000538266 KCNK17Q96T54 332 aa7.31□□□□□ -1.24
SNHG1-208ENST00000538266 AXIN2Q9Y2T1 843 aa7.31□□□□□ -1.24
SNHG1-208ENST00000538266 URB2Q14146 1524 aaKnown RBP7.31□□□□□ -1.24
SNHG1-208ENST00000538266 CUX2O14529 1486 aa7.3□□□□□ -1.24
SNHG1-208ENST00000538266 PSEN2P49810 448 aa7.3□□□□□ -1.24
SNHG1-208ENST00000538266 POTEEQ6S8J3 1075 aa7.3□□□□□ -1.24
SNHG1-208ENST00000538266 WRNQ14191 1432 aaPredicted RBP eCLIP7.29□□□□□ -1.24
SNHG1-208ENST00000538266 TOPBP1Q92547 1522 aa7.29□□□□□ -1.24
SNHG1-208ENST00000538266 GNPATO15228 680 aa7.29□□□□□ -1.24
SNHG1-208ENST00000538266 ZMYND10O75800 440 aa7.29□□□□□ -1.24
SNHG1-208ENST00000538266 COL9A1P20849 921 aa7.29□□□□□ -1.24
SNHG1-208ENST00000538266 HIC1Q14526 733 aa7.29□□□□□ -1.24
SNHG1-208ENST00000538266 KRI1Q8N9T8 703 aaKnown RBP7.29□□□□□ -1.24
SNHG1-208ENST00000538266 PBX2P40425 430 aa7.28□□□□□ -1.24
SNHG1-208ENST00000538266 POTEGQ6S5H5 508 aa7.28□□□□□ -1.24
SNHG1-208ENST00000538266 CUX1P39880 1505 aa7.27□□□□□ -1.25
SNHG1-208ENST00000538266 POTEMA6NI47 508 aa7.27□□□□□ -1.25
SNHG1-208ENST00000538266 PPP1R3GB7ZBB8 358 aa7.27□□□□□ -1.25
SNHG1-208ENST00000538266 GPR37O15354 613 aa7.27□□□□□ -1.25
SNHG1-208ENST00000538266 PRSS12P56730 875 aa7.27□□□□□ -1.25
SNHG1-208ENST00000538266 BARGINQ6ZT62 677 aa7.27□□□□□ -1.25
SNHG1-208ENST00000538266 FECHP22830 423 aa7.26□□□□□ -1.25
SNHG1-208ENST00000538266 CDCA7LQ96GN5 454 aa7.26□□□□□ -1.25
SNHG1-208ENST00000538266 DMRTA1Q5VZB9 504 aa7.25□□□□□ -1.25
SNHG1-208ENST00000538266 TOP2BQ02880 1626 aa7.25□□□□□ -1.25
SNHG1-208ENST00000538266 BIVM-ERCC5R4GMW8 1640 aa7.25□□□□□ -1.25
SNHG1-208ENST00000538266 SYNJ1O43426 1573 aa7.25□□□□□ -1.25
SNHG1-208ENST00000538266 FGD5Q6ZNL6 1462 aa7.24□□□□□ -1.25
SNHG1-208ENST00000538266 PADI6Q6TGC4 694 aa7.24□□□□□ -1.25
SNHG1-208ENST00000538266 ZBED2Q9BTP6 218 aa7.24□□□□□ -1.25
SNHG1-208ENST00000538266 POLA1P09884 1462 aaPredicted RBP7.24□□□□□ -1.25
SNHG1-208ENST00000538266 PROX2Q3B8N5 592 aa7.23□□□□□ -1.25
SNHG1-208ENST00000538266 ANKRD13DQ6ZTN6 518 aa7.23□□□□□ -1.25
SNHG1-208ENST00000538266 PACS2Q86VP3 889 aa7.23□□□□□ -1.25
SNHG1-208ENST00000538266 CDAN1Q8IWY9 1227 aa7.23□□□□□ -1.25
SNHG1-208ENST00000538266 SLC24A3Q9HC58 644 aa7.23□□□□□ -1.25
SNHG1-208ENST00000538266 MINK1Q8N4C8 1332 aaPredicted RBP7.23□□□□□ -1.25
SNHG1-208ENST00000538266 IFT140Q96RY7 1462 aa7.23□□□□□ -1.25
SNHG1-208ENST00000538266 TRIM6-TRIM34B2RNG4 842 aa7.22□□□□□ -1.25
SNHG1-208ENST00000538266 IRF6O14896 467 aa7.22□□□□□ -1.25
SNHG1-208ENST00000538266 ONECUT3O60422 494 aaPredicted RBP7.22□□□□□ -1.25
SNHG1-208ENST00000538266 SLC4A5Q9BY07 1137 aa7.22□□□□□ -1.25
SNHG1-208ENST00000538266 KIAA1468Q9P260 1216 aa7.22□□□□□ -1.25
SNHG1-208ENST00000538266 RBM27Q9P2N5 1060 aaKnown RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms