RNA–Protein interactions for RNA: ENST00000537103.2

IFT88-207, Transcript of intraflagellar transport 88, humanhuman

TSL 5

Gene IFT88, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-207ENST00000537103 ZC3H13Q5T200 1668 aaKnown RBP10.07□□□□□ -0.8
IFT88-207ENST00000537103 GCC2Q8IWJ2 1684 aa10.07□□□□□ -0.8
IFT88-207ENST00000537103 DEPDC5O75140 1603 aa10.06□□□□□ -0.8
IFT88-207ENST00000537103 MROH2AA6NES4 1674 aa10.06□□□□□ -0.8
IFT88-207ENST00000537103 A2MP01023 1474 aa10.05□□□□□ -0.8
IFT88-207ENST00000537103 SPAG9O60271 1321 aaKnown RBP10.05□□□□□ -0.8
IFT88-207ENST00000537103 ANKRD30AQ9BXX3 1397 aa10.05□□□□□ -0.8
IFT88-207ENST00000537103 DHX29Q7Z478 1369 aaKnown RBP10.05□□□□□ -0.8
IFT88-207ENST00000537103 TSPY4P0CV99 314 aa10.04□□□□□ -0.8
IFT88-207ENST00000537103 TSPY10P0CW01 314 aa10.04□□□□□ -0.8
IFT88-207ENST00000537103 CNTLNQ9NXG0 1405 aa10.03□□□□□ -0.8
IFT88-207ENST00000537103 ADAMTSL3P82987 1691 aa10.03□□□□□ -0.8
IFT88-207ENST00000537103 UNC13BO14795 1591 aa10.03□□□□□ -0.8
IFT88-207ENST00000537103 LMTK2Q8IWU2 1503 aa10.03□□□□□ -0.8
IFT88-207ENST00000537103 VSIG10Q8N0Z9 540 aa10.03□□□□□ -0.8
IFT88-207ENST00000537103 NCOA1Q15788 1441 aa10.03□□□□□ -0.8
IFT88-207ENST00000537103 PRDM15P57071 1507 aaPredicted RBP10.02□□□□□ -0.81
IFT88-207ENST00000537103 GTF3C3Q9Y5Q9 886 aa10.02□□□□□ -0.81
IFT88-207ENST00000537103 VWDEQ8N2E2 1590 aa10.02□□□□□ -0.81
IFT88-207ENST00000537103 HRCP23327 699 aa10.01□□□□□ -0.81
IFT88-207ENST00000537103 HFM1A2PYH4 1435 aa10□□□□□ -0.81
IFT88-207ENST00000537103 YEATS2Q9ULM3 1422 aa10□□□□□ -0.81
IFT88-207ENST00000537103 HNRNPMP52272 730 aaKnown RBP eCLIP10□□□□□ -0.81
IFT88-207ENST00000537103 MAPK8IP2Q13387 824 aaPredicted RBP10□□□□□ -0.81
IFT88-207ENST00000537103 HOMEZQ8IX15 550 aa9.99□□□□□ -0.81
IFT88-207ENST00000537103 KDM2AQ9Y2K7 1162 aa9.99□□□□□ -0.81
IFT88-207ENST00000537103 SCAF1Q9H7N4 1312 aaKnown RBP9.99□□□□□ -0.81
IFT88-207ENST00000537103 ZNF644Q9H582 1327 aaPredicted RBP9.99□□□□□ -0.81
IFT88-207ENST00000537103 RAPGEF3O95398 923 aa9.98□□□□□ -0.81
IFT88-207ENST00000537103 AFAP1Q8N556 730 aa9.98□□□□□ -0.81
IFT88-207ENST00000537103 ZNF777Q9ULD5 760 aaPredicted RBP9.98□□□□□ -0.81
IFT88-207ENST00000537103 KIF15Q9NS87 1388 aa9.98□□□□□ -0.81
IFT88-207ENST00000537103 MROH1Q8NDA8 1641 aa9.97□□□□□ -0.81
IFT88-207ENST00000537103 ARHGAP31Q2M1Z3 1444 aa9.97□□□□□ -0.81
IFT88-207ENST00000537103 IQGAP3Q86VI3 1631 aa9.97□□□□□ -0.81
IFT88-207ENST00000537103 PTPRKQ15262 1439 aa9.95□□□□□ -0.82
IFT88-207ENST00000537103 SIGLEC1Q9BZZ2 1709 aa9.95□□□□□ -0.82
IFT88-207ENST00000537103 RPRD2Q5VT52 1461 aaKnown RBP9.95□□□□□ -0.82
IFT88-207ENST00000537103 FER1L4A9Z1Z3 1794 aa9.95□□□□□ -0.82
IFT88-207ENST00000537103 NPATQ14207 1427 aa9.95□□□□□ -0.82
IFT88-207ENST00000537103 ANKRD50Q9ULJ7 1429 aa9.95□□□□□ -0.82
IFT88-207ENST00000537103 NAIPQ13075 1403 aa9.94□□□□□ -0.82
IFT88-207ENST00000537103 TET3O43151 1660 aa9.94□□□□□ -0.82
IFT88-207ENST00000537103 KDM5AP29375 1690 aaKnown RBP9.93□□□□□ -0.82
IFT88-207ENST00000537103 ABCC3O15438 1527 aa9.92□□□□□ -0.82
IFT88-207ENST00000537103 FAM50AQ14320 339 aaKnown RBP9.92□□□□□ -0.82
IFT88-207ENST00000537103 KANK1Q14678 1352 aa9.92□□□□□ -0.82
IFT88-207ENST00000537103 CAMSAP1Q5T5Y3 1602 aa9.91□□□□□ -0.82
IFT88-207ENST00000537103 NEURL4Q96JN8 1562 aa9.91□□□□□ -0.82
IFT88-207ENST00000537103 PZPP20742 1482 aa9.9□□□□□ -0.82
IFT88-207ENST00000537103 MADDQ8WXG6 1647 aa9.9□□□□□ -0.82
IFT88-207ENST00000537103 EFCAB6Q5THR3 1501 aa9.9□□□□□ -0.82
IFT88-207ENST00000537103 SPATA31D1Q6ZQQ2 1576 aa9.9□□□□□ -0.83
IFT88-207ENST00000537103 SETD5Q9C0A6 1442 aa9.89□□□□□ -0.83
IFT88-207ENST00000537103 ZNF142P52746 1687 aaPredicted RBP9.88□□□□□ -0.83
IFT88-207ENST00000537103 CLTCQ00610 1675 aaKnown RBP9.87□□□□□ -0.83
IFT88-207ENST00000537103 C3P01024 1663 aa9.87□□□□□ -0.83
IFT88-207ENST00000537103 RIMS1Q86UR5 1692 aaKnown RBP9.87□□□□□ -0.83
IFT88-207ENST00000537103 TRIM26Q12899 539 aaPredicted RBP9.87□□□□□ -0.83
IFT88-207ENST00000537103 PTPRMP28827 1452 aa9.86□□□□□ -0.83
IFT88-207ENST00000537103 NLRP1Q9C000 1473 aa9.85□□□□□ -0.83
IFT88-207ENST00000537103 PREX1Q8TCU6 1659 aa9.85□□□□□ -0.83
IFT88-207ENST00000537103 CEP152O94986 1710 aa9.85□□□□□ -0.83
IFT88-207ENST00000537103 NOS1P29475 1434 aa9.84□□□□□ -0.83
IFT88-207ENST00000537103 MYT1LQ9UL68 1186 aa9.84□□□□□ -0.83
IFT88-207ENST00000537103 PIK3C2BO00750 1634 aa9.84□□□□□ -0.83
IFT88-207ENST00000537103 PTPRTO14522 1441 aa9.84□□□□□ -0.83
IFT88-207ENST00000537103 RRP7BPQ9NSQ0 103 aa9.83□□□□□ -0.84
IFT88-207ENST00000537103 ERVK-7P63135 1459 aa9.83□□□□□ -0.84
IFT88-207ENST00000537103 KIF3BO15066 747 aa9.82□□□□□ -0.84
IFT88-207ENST00000537103 TRPM2O94759 1503 aa9.82□□□□□ -0.84
IFT88-207ENST00000537103 E9PCH4 1651 aa9.81□□□□□ -0.84
IFT88-207ENST00000537103 ZMYM3Q14202 1370 aa9.81□□□□□ -0.84
IFT88-207ENST00000537103 MYO3AQ8NEV4 1616 aa9.81□□□□□ -0.84
IFT88-207ENST00000537103 SPHKAPQ2M3C7 1700 aa9.81□□□□□ -0.84
IFT88-207ENST00000537103 RNF216Q9NWF9 866 aaPredicted RBP9.8□□□□□ -0.84
IFT88-207ENST00000537103 ARID4BQ4LE39 1312 aaPredicted RBP9.8□□□□□ -0.84
IFT88-207ENST00000537103 ESF1Q9H501 851 aaKnown RBP9.8□□□□□ -0.84
IFT88-207ENST00000537103 MSH5O43196 834 aa9.79□□□□□ -0.84
IFT88-207ENST00000537103 A2ML1A8K2U0 1454 aa9.79□□□□□ -0.84
IFT88-207ENST00000537103 PLA2R1Q13018 1463 aa9.79□□□□□ -0.84
IFT88-207ENST00000537103 KDM4FA0A1W2PPD8 638 aa9.79□□□□□ -0.84
IFT88-207ENST00000537103 TMEM132AQ24JP5 1023 aa9.79□□□□□ -0.84
IFT88-207ENST00000537103 RAB3GAP2Q9H2M9 1393 aa9.79□□□□□ -0.84
IFT88-207ENST00000537103 CHIC2Q9UKJ5 165 aa9.78□□□□□ -0.84
IFT88-207ENST00000537103 WASHC2CQ9Y4E1 1318 aa9.78□□□□□ -0.84
IFT88-207ENST00000537103 PODXL2Q9NZ53 605 aa9.78□□□□□ -0.84
IFT88-207ENST00000537103 NUP155O75694 1391 aa9.77□□□□□ -0.84
IFT88-207ENST00000537103 SETD1BQ9UPS6 1966 aaKnown RBP9.77□□□□□ -0.84
IFT88-207ENST00000537103 PPARGC1BQ86YN6 1023 aaKnown RBP9.77□□□□□ -0.84
IFT88-207ENST00000537103 ADGRB3O60242 1522 aa9.77□□□□□ -0.84
IFT88-207ENST00000537103 SYNMO15061 1565 aa9.77□□□□□ -0.85
IFT88-207ENST00000537103 CEP170BQ9Y4F5 1589 aaPredicted RBP9.77□□□□□ -0.85
IFT88-207ENST00000537103 TNRQ92752 1358 aa9.77□□□□□ -0.85
IFT88-207ENST00000537103 SLC52A1Q9NWF4 448 aa9.76□□□□□ -0.85
IFT88-207ENST00000537103 CLSPNQ9HAW4 1339 aa9.76□□□□□ -0.85
IFT88-207ENST00000537103 SLIT1O75093 1534 aa9.76□□□□□ -0.85
IFT88-207ENST00000537103 UHRF1BP1Q6BDS2 1440 aa9.76□□□□□ -0.85
IFT88-207ENST00000537103 GGT6Q6P531 493 aa9.74□□□□□ -0.85
IFT88-207ENST00000537103 ARHGAP23Q9P227 1491 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms