RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 ERBINQ96RT1 1412 aa17.33■□□□□ 0.36
TNFRSF1A-208ENST00000536194 GGT6Q6P531 493 aa17.32■□□□□ 0.36
TNFRSF1A-208ENST00000536194 DEPDC5O75140 1603 aa17.31■□□□□ 0.36
TNFRSF1A-208ENST00000536194 ROCK1Q13464 1354 aa17.3■□□□□ 0.36
TNFRSF1A-208ENST00000536194 ITGAEP38570 1179 aa17.3■□□□□ 0.36
TNFRSF1A-208ENST00000536194 CNTLNQ9NXG0 1405 aa17.3■□□□□ 0.36
TNFRSF1A-208ENST00000536194 PRDM15P57071 1507 aaPredicted RBP17.28■□□□□ 0.36
TNFRSF1A-208ENST00000536194 KDM5DQ9BY66 1539 aa17.28■□□□□ 0.36
TNFRSF1A-208ENST00000536194 FAM135AQ9P2D6 1515 aa17.28■□□□□ 0.36
TNFRSF1A-208ENST00000536194 CEP152O94986 1710 aa17.28■□□□□ 0.36
TNFRSF1A-208ENST00000536194 CEBPAP49715 358 aaPredicted RBP17.28■□□□□ 0.36
TNFRSF1A-208ENST00000536194 ZC3H13Q5T200 1668 aaKnown RBP17.26■□□□□ 0.35
TNFRSF1A-208ENST00000536194 PLPPR3Q6T4P5 718 aa17.26■□□□□ 0.35
TNFRSF1A-208ENST00000536194 PPP6R1Q9UPN7 881 aa17.26■□□□□ 0.35
TNFRSF1A-208ENST00000536194 ANKRD50Q9ULJ7 1429 aa17.26■□□□□ 0.35
TNFRSF1A-208ENST00000536194 ABCC3O15438 1527 aa17.25■□□□□ 0.35
TNFRSF1A-208ENST00000536194 ZMYM3Q14202 1370 aa17.25■□□□□ 0.35
TNFRSF1A-208ENST00000536194 GCC2Q8IWJ2 1684 aa17.24■□□□□ 0.35
TNFRSF1A-208ENST00000536194 ESF1Q9H501 851 aaKnown RBP17.24■□□□□ 0.35
TNFRSF1A-208ENST00000536194 VWDEQ8N2E2 1590 aa17.23■□□□□ 0.35
TNFRSF1A-208ENST00000536194 CAMSAP1Q5T5Y3 1602 aa17.22■□□□□ 0.35
TNFRSF1A-208ENST00000536194 UNC13BO14795 1591 aa17.22■□□□□ 0.35
TNFRSF1A-208ENST00000536194 PREX1Q8TCU6 1659 aa17.22■□□□□ 0.35
TNFRSF1A-208ENST00000536194 WASHC2CQ9Y4E1 1318 aa17.21■□□□□ 0.34
TNFRSF1A-208ENST00000536194 LMTK3Q96Q04 1460 aa17.2■□□□□ 0.34
TNFRSF1A-208ENST00000536194 SETD1BQ9UPS6 1966 aaKnown RBP17.19■□□□□ 0.34
TNFRSF1A-208ENST00000536194 NAIPQ13075 1403 aa17.19■□□□□ 0.34
TNFRSF1A-208ENST00000536194 PZPP20742 1482 aa17.18■□□□□ 0.34
TNFRSF1A-208ENST00000536194 NPATQ14207 1427 aa17.18■□□□□ 0.34
TNFRSF1A-208ENST00000536194 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.17■□□□□ 0.34
TNFRSF1A-208ENST00000536194 LMTK2Q8IWU2 1503 aa17.16■□□□□ 0.34
TNFRSF1A-208ENST00000536194 CFAP65Q6ZU64 1925 aaKnown RBP17.16■□□□□ 0.34
TNFRSF1A-208ENST00000536194 HFM1A2PYH4 1435 aa17.16■□□□□ 0.34
TNFRSF1A-208ENST00000536194 MYO3AQ8NEV4 1616 aa17.16■□□□□ 0.34
TNFRSF1A-208ENST00000536194 IQGAP3Q86VI3 1631 aa17.14■□□□□ 0.33
TNFRSF1A-208ENST00000536194 FBXO31Q5XUX0 539 aaPredicted RBP17.14■□□□□ 0.33
TNFRSF1A-208ENST00000536194 EFCAB6Q5THR3 1501 aa17.13■□□□□ 0.33
TNFRSF1A-208ENST00000536194 TET3O43151 1660 aa17.13■□□□□ 0.33
TNFRSF1A-208ENST00000536194 ZNF142P52746 1687 aaPredicted RBP17.13■□□□□ 0.33
TNFRSF1A-208ENST00000536194 KANK1Q14678 1352 aa17.13■□□□□ 0.33
TNFRSF1A-208ENST00000536194 SPATA31D1Q6ZQQ2 1576 aa17.12■□□□□ 0.33
TNFRSF1A-208ENST00000536194 ARHGAP31Q2M1Z3 1444 aa17.12■□□□□ 0.33
TNFRSF1A-208ENST00000536194 UHRF1BP1Q6BDS2 1440 aa17.12■□□□□ 0.33
TNFRSF1A-208ENST00000536194 ERVK-7P63135 1459 aa17.11■□□□□ 0.33
TNFRSF1A-208ENST00000536194 E9PCH4 1651 aa17.1■□□□□ 0.33
TNFRSF1A-208ENST00000536194 CEP170BQ9Y4F5 1589 aaPredicted RBP17.09■□□□□ 0.33
TNFRSF1A-208ENST00000536194 TNRQ92752 1358 aa17.08■□□□□ 0.32
TNFRSF1A-208ENST00000536194 HSPA2P54652 639 aa17.07■□□□□ 0.32
TNFRSF1A-208ENST00000536194 NUP155O75694 1391 aa17.06■□□□□ 0.32
TNFRSF1A-208ENST00000536194 SYNMO15061 1565 aa17.06■□□□□ 0.32
TNFRSF1A-208ENST00000536194 STRCQ7RTU9 1775 aa17.04■□□□□ 0.32
TNFRSF1A-208ENST00000536194 A2ML1A8K2U0 1454 aa17.04■□□□□ 0.32
TNFRSF1A-208ENST00000536194 RPRD2Q5VT52 1461 aaKnown RBP17.04■□□□□ 0.32
TNFRSF1A-208ENST00000536194 NLRP1Q9C000 1473 aa17.03■□□□□ 0.32
TNFRSF1A-208ENST00000536194 NOS1P29475 1434 aa17.03■□□□□ 0.32
TNFRSF1A-208ENST00000536194 SETD5Q9C0A6 1442 aa17.01■□□□□ 0.31
TNFRSF1A-208ENST00000536194 UBR1Q8IWV7 1749 aa17■□□□□ 0.31
TNFRSF1A-208ENST00000536194 PIK3C2BO00750 1634 aa16.99■□□□□ 0.31
TNFRSF1A-208ENST00000536194 SPHKAPQ2M3C7 1700 aa16.99■□□□□ 0.31
TNFRSF1A-208ENST00000536194 UGGT1Q9NYU2 1555 aa16.98■□□□□ 0.31
TNFRSF1A-208ENST00000536194 RAB3GAP2Q9H2M9 1393 aa16.98■□□□□ 0.31
TNFRSF1A-208ENST00000536194 TRIM52Q96A61 297 aa16.96■□□□□ 0.31
TNFRSF1A-208ENST00000536194 MYO5BQ9ULV0 1848 aa16.96■□□□□ 0.3
TNFRSF1A-208ENST00000536194 KDM5AP29375 1690 aaKnown RBP16.95■□□□□ 0.3
TNFRSF1A-208ENST00000536194 PLA2R1Q13018 1463 aa16.95■□□□□ 0.3
TNFRSF1A-208ENST00000536194 POLR1AO95602 1720 aaPredicted RBP16.94■□□□□ 0.3
TNFRSF1A-208ENST00000536194 IDI1Q13907 227 aa16.93■□□□□ 0.3
TNFRSF1A-208ENST00000536194 ADGRB3O60242 1522 aa16.92■□□□□ 0.3
TNFRSF1A-208ENST00000536194 PTPRTO14522 1441 aa16.92■□□□□ 0.3
TNFRSF1A-208ENST00000536194 NEURL4Q96JN8 1562 aa16.91■□□□□ 0.3
TNFRSF1A-208ENST00000536194 TMEM131LA2VDJ0 1609 aa16.91■□□□□ 0.3
TNFRSF1A-208ENST00000536194 PKD2Q13563 968 aa16.9■□□□□ 0.3
TNFRSF1A-208ENST00000536194 SLC4A1APQ9BWU0 796 aaKnown RBP16.9■□□□□ 0.3
TNFRSF1A-208ENST00000536194 TRPM2O94759 1503 aa16.9■□□□□ 0.3
TNFRSF1A-208ENST00000536194 CLTCL1P53675 1640 aa16.89■□□□□ 0.29
TNFRSF1A-208ENST00000536194 SLC52A1Q9NWF4 448 aa16.89■□□□□ 0.29
TNFRSF1A-208ENST00000536194 NCKAP5LQ9HCH0 1330 aa16.89■□□□□ 0.29
TNFRSF1A-208ENST00000536194 ARHGAP23Q9P227 1491 aa16.88■□□□□ 0.29
TNFRSF1A-208ENST00000536194 SLIT1O75093 1534 aa16.88■□□□□ 0.29
TNFRSF1A-208ENST00000536194 THEMISQ8N1K5 641 aaPredicted RBP16.88■□□□□ 0.29
TNFRSF1A-208ENST00000536194 MPHOSPH9Q99550 1183 aa16.87■□□□□ 0.29
TNFRSF1A-208ENST00000536194 FOXD1Q16676 465 aa16.86■□□□□ 0.29
TNFRSF1A-208ENST00000536194 HRCP23327 699 aa16.84■□□□□ 0.29
TNFRSF1A-208ENST00000536194 TMEM2Q9UHN6 1383 aa16.84■□□□□ 0.29
TNFRSF1A-208ENST00000536194 MED14O60244 1454 aa16.83■□□□□ 0.28
TNFRSF1A-208ENST00000536194 KIF1BO60333 1816 aa16.83■□□□□ 0.28
TNFRSF1A-208ENST00000536194 IQGAP1P46940 1657 aa16.83■□□□□ 0.28
TNFRSF1A-208ENST00000536194 TRIM26Q12899 539 aaPredicted RBP16.83■□□□□ 0.28
TNFRSF1A-208ENST00000536194 ACIN1Q9UKV3 1341 aaKnown RBP16.83■□□□□ 0.28
TNFRSF1A-208ENST00000536194 STAG3Q9UJ98 1225 aa16.82■□□□□ 0.28
TNFRSF1A-208ENST00000536194 SCAF11Q99590 1463 aaKnown RBP16.81■□□□□ 0.28
TNFRSF1A-208ENST00000536194 ZFYVE9O95405 1425 aa16.81■□□□□ 0.28
TNFRSF1A-208ENST00000536194 LTKP29376 864 aa16.81■□□□□ 0.28
TNFRSF1A-208ENST00000536194 ANKLE2Q86XL3 938 aa16.81■□□□□ 0.28
TNFRSF1A-208ENST00000536194 DMRT2Q9Y5R5 561 aa16.79■□□□□ 0.28
TNFRSF1A-208ENST00000536194 NPHP4O75161 1426 aaPredicted RBP16.79■□□□□ 0.28
TNFRSF1A-208ENST00000536194 CHGAP10645 457 aaKnown RBP16.78■□□□□ 0.28
TNFRSF1A-208ENST00000536194 TXNDC2Q86VQ3 553 aa16.77■□□□□ 0.28
TNFRSF1A-208ENST00000536194 RIMS2Q9UQ26 1411 aa16.77■□□□□ 0.27
TNFRSF1A-208ENST00000536194 NEXMIFQ5QGS0 1516 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms