RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 CCDC144AA2RUR9 1427 aa18.56■□□□□ 0.56
VPS33B-202ENST00000535906 BCORL1Q5H9F3 1711 aa18.56■□□□□ 0.56
VPS33B-202ENST00000535906 MAGI2Q86UL8 1455 aa18.55■□□□□ 0.56
VPS33B-202ENST00000535906 SPAG9O60271 1321 aaKnown RBP18.54■□□□□ 0.56
VPS33B-202ENST00000535906 CARD11Q9BXL7 1154 aa18.53■□□□□ 0.56
VPS33B-202ENST00000535906 PRKRIP1Q9H875 184 aaPredicted RBP18.53■□□□□ 0.56
VPS33B-202ENST00000535906 ABCA9Q8IUA7 1624 aa18.52■□□□□ 0.56
VPS33B-202ENST00000535906 OSCARQ8IYS5 282 aa18.52■□□□□ 0.55
VPS33B-202ENST00000535906 FANCAO15360 1455 aa18.52■□□□□ 0.55
VPS33B-202ENST00000535906 RTEL1-TNFRSF6BF6WH68 1400 aa18.51■□□□□ 0.55
VPS33B-202ENST00000535906 RGL3Q3MIN7 710 aa18.51■□□□□ 0.55
VPS33B-202ENST00000535906 ASXL2Q76L83 1435 aa18.51■□□□□ 0.55
VPS33B-202ENST00000535906 ZFYVE16Q7Z3T8 1539 aa18.51■□□□□ 0.55
VPS33B-202ENST00000535906 CCDC184Q52MB2 194 aa18.5■□□□□ 0.55
VPS33B-202ENST00000535906 ATP10AO60312 1499 aa18.47■□□□□ 0.55
VPS33B-202ENST00000535906 PRAG1Q86YV5 1406 aa18.47■□□□□ 0.55
VPS33B-202ENST00000535906 POLR3GLQ9BT43 218 aa18.47■□□□□ 0.55
VPS33B-202ENST00000535906 ROCK2O75116 1388 aaKnown RBP18.46■□□□□ 0.55
VPS33B-202ENST00000535906 ARID4BQ4LE39 1312 aaPredicted RBP18.46■□□□□ 0.55
VPS33B-202ENST00000535906 A2MP01023 1474 aa18.46■□□□□ 0.55
VPS33B-202ENST00000535906 ST20-MTHFSA0A0A6YYL1 179 aa18.46■□□□□ 0.55
VPS33B-202ENST00000535906 TRPM1Q7Z4N2 1603 aa18.44■□□□□ 0.54
VPS33B-202ENST00000535906 DHX29Q7Z478 1369 aaKnown RBP18.44■□□□□ 0.54
VPS33B-202ENST00000535906 ADGRL1O94910 1474 aa18.44■□□□□ 0.54
VPS33B-202ENST00000535906 SCAPERQ9BY12 1400 aa18.44■□□□□ 0.54
VPS33B-202ENST00000535906 ATP7AQ04656 1500 aa18.44■□□□□ 0.54
VPS33B-202ENST00000535906 INO80Q9ULG1 1556 aaPredicted RBP18.43■□□□□ 0.54
VPS33B-202ENST00000535906 HNRNPUQ00839 825 aaKnown RBP eCLIP18.43■□□□□ 0.54
VPS33B-202ENST00000535906 NBPF1Q3BBV0 1214 aa18.42■□□□□ 0.54
VPS33B-202ENST00000535906 E9PCH4 1651 aa18.41■□□□□ 0.54
VPS33B-202ENST00000535906 DEPDC5O75140 1603 aa18.4■□□□□ 0.54
VPS33B-202ENST00000535906 NPM1P06748 294 aaKnown RBP eCLIP18.4■□□□□ 0.54
VPS33B-202ENST00000535906 MRS2Q9HD23 443 aa18.4■□□□□ 0.54
VPS33B-202ENST00000535906 FKBP8Q14318 412 aa18.39■□□□□ 0.53
VPS33B-202ENST00000535906 MYT1LQ9UL68 1186 aa18.39■□□□□ 0.53
VPS33B-202ENST00000535906 GPRASP1Q5JY77 1395 aa18.38■□□□□ 0.53
VPS33B-202ENST00000535906 KIF3BO15066 747 aa18.37■□□□□ 0.53
VPS33B-202ENST00000535906 FAM9BQ8IZU0 186 aa18.37■□□□□ 0.53
VPS33B-202ENST00000535906 CNGB1Q14028 1251 aaPredicted RBP18.36■□□□□ 0.53
VPS33B-202ENST00000535906 NEFLP07196 543 aa18.35■□□□□ 0.53
VPS33B-202ENST00000535906 VWDEQ8N2E2 1590 aa18.34■□□□□ 0.53
VPS33B-202ENST00000535906 TRPM2O94759 1503 aa18.34■□□□□ 0.53
VPS33B-202ENST00000535906 PTPRTO14522 1441 aa18.34■□□□□ 0.53
VPS33B-202ENST00000535906 TET3O43151 1660 aa18.33■□□□□ 0.53
VPS33B-202ENST00000535906 SPHKAPQ2M3C7 1700 aa18.33■□□□□ 0.53
VPS33B-202ENST00000535906 KIDINS220Q9ULH0 1771 aa18.33■□□□□ 0.52
VPS33B-202ENST00000535906 KANK1Q14678 1352 aa18.33■□□□□ 0.52
VPS33B-202ENST00000535906 LAMC1P11047 1609 aa18.32■□□□□ 0.52
VPS33B-202ENST00000535906 EIF2AK4Q9P2K8 1649 aaKnown RBP18.32■□□□□ 0.52
VPS33B-202ENST00000535906 PRDM15P57071 1507 aaPredicted RBP18.32■□□□□ 0.52
VPS33B-202ENST00000535906 CD109Q6YHK3 1445 aa18.32■□□□□ 0.52
VPS33B-202ENST00000535906 MROH1Q8NDA8 1641 aa18.31■□□□□ 0.52
VPS33B-202ENST00000535906 BCANQ96GW7 911 aa18.31■□□□□ 0.52
VPS33B-202ENST00000535906 ZNF518AQ6AHZ1 1483 aa18.31■□□□□ 0.52
VPS33B-202ENST00000535906 TSHZ2Q9NRE2 1034 aa18.3■□□□□ 0.52
VPS33B-202ENST00000535906 CLTCL1P53675 1640 aa18.3■□□□□ 0.52
VPS33B-202ENST00000535906 CEP152O94986 1710 aa18.3■□□□□ 0.52
VPS33B-202ENST00000535906 TESK2Q96S53 571 aa18.28■□□□□ 0.52
VPS33B-202ENST00000535906 RNF17Q9BXT8 1623 aaKnown RBP18.26■□□□□ 0.51
VPS33B-202ENST00000535906 MADDQ8WXG6 1647 aa18.26■□□□□ 0.51
VPS33B-202ENST00000535906 POGZQ7Z3K3 1410 aa18.25■□□□□ 0.51
VPS33B-202ENST00000535906 CFAP74Q9C0B2 1584 aa18.25■□□□□ 0.51
VPS33B-202ENST00000535906 DISP3Q9P2K9 1392 aa18.24■□□□□ 0.51
VPS33B-202ENST00000535906 COL17A1Q9UMD9 1497 aaPredicted RBP18.24■□□□□ 0.51
VPS33B-202ENST00000535906 ZBED9Q6R2W3 1325 aa18.23■□□□□ 0.51
VPS33B-202ENST00000535906 UGGT1Q9NYU2 1555 aa18.21■□□□□ 0.51
VPS33B-202ENST00000535906 EFCAB6Q5THR3 1501 aa18.21■□□□□ 0.51
VPS33B-202ENST00000535906 MLH3Q9UHC1 1453 aa18.21■□□□□ 0.51
VPS33B-202ENST00000535906 STAC3Q96MF2 364 aa18.21■□□□□ 0.51
VPS33B-202ENST00000535906 PPRC1Q5VV67 1664 aaKnown RBP18.2■□□□□ 0.5
VPS33B-202ENST00000535906 PER1O15534 1290 aaPredicted RBP18.2■□□□□ 0.5
VPS33B-202ENST00000535906 MYT1Q01538 1121 aa18.2■□□□□ 0.5
VPS33B-202ENST00000535906 FRMPD1Q5SYB0 1578 aa18.19■□□□□ 0.5
VPS33B-202ENST00000535906 HECW2Q9P2P5 1572 aa18.19■□□□□ 0.5
VPS33B-202ENST00000535906 TMF1P82094 1093 aa18.19■□□□□ 0.5
VPS33B-202ENST00000535906 RALBP1Q15311 655 aa18.19■□□□□ 0.5
VPS33B-202ENST00000535906 TMC1Q8TDI8 760 aa18.19■□□□□ 0.5
VPS33B-202ENST00000535906 PNISRQ8TF01 805 aaKnown RBP18.19■□□□□ 0.5
VPS33B-202ENST00000535906 KTN1Q86UP2 1357 aaKnown RBP18.19■□□□□ 0.5
VPS33B-202ENST00000535906 LMTK2Q8IWU2 1503 aa18.18■□□□□ 0.5
VPS33B-202ENST00000535906 IQGAP1P46940 1657 aa18.18■□□□□ 0.5
VPS33B-202ENST00000535906 NEURL4Q96JN8 1562 aa18.17■□□□□ 0.5
VPS33B-202ENST00000535906 MYBBP1AQ9BQG0 1328 aaKnown RBP18.17■□□□□ 0.5
VPS33B-202ENST00000535906 RAPGEF3O95398 923 aa18.17■□□□□ 0.5
VPS33B-202ENST00000535906 NEO1Q92859 1461 aa18.16■□□□□ 0.5
VPS33B-202ENST00000535906 GGT6Q6P531 493 aa18.15■□□□□ 0.5
VPS33B-202ENST00000535906 ABCA6Q8N139 1617 aa18.15■□□□□ 0.5
VPS33B-202ENST00000535906 KIF1BO60333 1816 aa18.15■□□□□ 0.5
VPS33B-202ENST00000535906 BRD4O60885 1362 aaPredicted RBP18.14■□□□□ 0.49
VPS33B-202ENST00000535906 PANK3Q9H999 370 aa18.14■□□□□ 0.49
VPS33B-202ENST00000535906 PARD3Q8TEW0 1356 aa18.14■□□□□ 0.49
VPS33B-202ENST00000535906 SCAF11Q99590 1463 aaKnown RBP18.13■□□□□ 0.49
VPS33B-202ENST00000535906 CYB5RLQ6IPT4 315 aa18.13■□□□□ 0.49
VPS33B-202ENST00000535906 MROH2AA6NES4 1674 aa18.12■□□□□ 0.49
VPS33B-202ENST00000535906 ADGRF5Q8IZF2 1346 aa18.12■□□□□ 0.49
VPS33B-202ENST00000535906 NPATQ14207 1427 aa18.12■□□□□ 0.49
VPS33B-202ENST00000535906 CFAP65Q6ZU64 1925 aaKnown RBP18.12■□□□□ 0.49
VPS33B-202ENST00000535906 MAP3K4Q9Y6R4 1608 aa18.11■□□□□ 0.49
VPS33B-202ENST00000535906 IRX6P78412 446 aaPredicted RBP18.11■□□□□ 0.49
VPS33B-202ENST00000535906 KIAA1210Q9ULL0 1709 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms