RNA–Protein interactions for RNA: ENST00000535809.1

LDHC-203, Transcript of lactate dehydrogenase C, humanhuman

TSL 5 BASIC

Gene LDHC, Length 757 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-203ENST00000535809 MYCNP04198 464 aaPredicted RBP8.9□□□□□ -0.98
LDHC-203ENST00000535809 TMEM132AQ24JP5 1023 aa8.9□□□□□ -0.98
LDHC-203ENST00000535809 RAPGEF6Q8TEU7 1601 aa8.9□□□□□ -0.99
LDHC-203ENST00000535809 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.89□□□□□ -0.99
LDHC-203ENST00000535809 TRAPPC8Q9Y2L5 1435 aa8.88□□□□□ -0.99
LDHC-203ENST00000535809 ALKQ9UM73 1620 aa8.88□□□□□ -0.99
LDHC-203ENST00000535809 NCKAP5LQ9HCH0 1330 aa8.88□□□□□ -0.99
LDHC-203ENST00000535809 SUPT6HQ7KZ85 1726 aaKnown RBP8.88□□□□□ -0.99
LDHC-203ENST00000535809 BCCIPQ9P287 314 aaKnown RBP eCLIP8.87□□□□□ -0.99
LDHC-203ENST00000535809 RGS17Q9UGC6 210 aaPredicted RBP8.87□□□□□ -0.99
LDHC-203ENST00000535809 ZNF142P52746 1687 aaPredicted RBP8.87□□□□□ -0.99
LDHC-203ENST00000535809 DIP2CQ9Y2E4 1556 aa8.86□□□□□ -0.99
LDHC-203ENST00000535809 MYO3AQ8NEV4 1616 aa8.85□□□□□ -0.99
LDHC-203ENST00000535809 SUPT5HO00267 1087 aaKnown RBP8.85□□□□□ -0.99
LDHC-203ENST00000535809 FGD1P98174 961 aa8.85□□□□□ -0.99
LDHC-203ENST00000535809 ARID3AQ99856 593 aa8.85□□□□□ -0.99
LDHC-203ENST00000535809 SCAPERQ9BY12 1400 aa8.85□□□□□ -0.99
LDHC-203ENST00000535809 NUP153P49790 1475 aaKnown RBP8.84□□□□□ -0.99
LDHC-203ENST00000535809 PLA2R1Q13018 1463 aa8.84□□□□□ -0.99
LDHC-203ENST00000535809 TCOF1Q13428 1488 aaKnown RBP8.84□□□□□ -0.99
LDHC-203ENST00000535809 TOM1O60784 492 aa8.84□□□□□ -0.99
LDHC-203ENST00000535809 PIP4P2Q8N4L2 257 aa8.84□□□□□ -0.99
LDHC-203ENST00000535809 ABCA6Q8N139 1617 aa8.83□□□□□ -1
LDHC-203ENST00000535809 REREQ9P2R6 1566 aa8.83□□□□□ -1
LDHC-203ENST00000535809 REM2Q8IYK8 340 aaPredicted RBP8.83□□□□□ -1
LDHC-203ENST00000535809 CPS1P31327 1500 aa8.83□□□□□ -1
LDHC-203ENST00000535809 KDM5CP41229 1560 aa8.82□□□□□ -1
LDHC-203ENST00000535809 CEP170BQ9Y4F5 1589 aaPredicted RBP8.82□□□□□ -1
LDHC-203ENST00000535809 MROH2AA6NES4 1674 aa8.81□□□□□ -1
LDHC-203ENST00000535809 AGLP35573 1532 aa8.81□□□□□ -1
LDHC-203ENST00000535809 P3H3Q8IVL6 736 aa8.81□□□□□ -1
LDHC-203ENST00000535809 SAMD9Q5K651 1589 aa8.81□□□□□ -1
LDHC-203ENST00000535809 NPATQ14207 1427 aa8.8□□□□□ -1
LDHC-203ENST00000535809 POTEAQ6S8J7 498 aa8.8□□□□□ -1
LDHC-203ENST00000535809 POLR1AO95602 1720 aaPredicted RBP8.8□□□□□ -1
LDHC-203ENST00000535809 ZNF518AQ6AHZ1 1483 aa8.79□□□□□ -1
LDHC-203ENST00000535809 PKD2Q13563 968 aa8.79□□□□□ -1
LDHC-203ENST00000535809 GLIPR1L2Q4G1C9 344 aa8.79□□□□□ -1
LDHC-203ENST00000535809 MYO5CQ9NQX4 1742 aa8.79□□□□□ -1
LDHC-203ENST00000535809 PTPRKQ15262 1439 aa8.79□□□□□ -1
LDHC-203ENST00000535809 CNTLNQ9NXG0 1405 aa8.79□□□□□ -1
LDHC-203ENST00000535809 NEURL4Q96JN8 1562 aa8.78□□□□□ -1
LDHC-203ENST00000535809 SHANK2Q9UPX8 1470 aa8.78□□□□□ -1
LDHC-203ENST00000535809 CHMP4AQ9BY43 222 aa8.78□□□□□ -1
LDHC-203ENST00000535809 ZBTB12Q9Y330 459 aaPredicted RBP8.78□□□□□ -1
LDHC-203ENST00000535809 RNF17Q9BXT8 1623 aaKnown RBP8.77□□□□□ -1.01
LDHC-203ENST00000535809 RSPH4AQ5TD94 716 aa8.77□□□□□ -1.01
LDHC-203ENST00000535809 ESF1Q9H501 851 aaKnown RBP8.77□□□□□ -1.01
LDHC-203ENST00000535809 PLCH2O75038 1416 aa8.77□□□□□ -1.01
LDHC-203ENST00000535809 VWDEQ8N2E2 1590 aa8.77□□□□□ -1.01
LDHC-203ENST00000535809 ACIN1Q9UKV3 1341 aaKnown RBP8.77□□□□□ -1.01
LDHC-203ENST00000535809 HAX1O00165 279 aa8.76□□□□□ -1.01
LDHC-203ENST00000535809 ZEB1P37275 1124 aaPredicted RBP8.76□□□□□ -1.01
LDHC-203ENST00000535809 FXR2P51116 673 aaKnown RBP eCLIP8.76□□□□□ -1.01
LDHC-203ENST00000535809 VSIG10Q8N0Z9 540 aa8.76□□□□□ -1.01
LDHC-203ENST00000535809 PLEKHD1A6NEE1 506 aa8.75□□□□□ -1.01
LDHC-203ENST00000535809 ATF5Q9Y2D1 282 aaPredicted RBP8.75□□□□□ -1.01
LDHC-203ENST00000535809 CLTCQ00610 1675 aaKnown RBP8.75□□□□□ -1.01
LDHC-203ENST00000535809 SRCAPQ6ZRS2 3230 aa8.73□□□□□ -1.01
LDHC-203ENST00000535809 DNMT1P26358 1616 aaKnown RBP8.73□□□□□ -1.01
LDHC-203ENST00000535809 CDK13Q14004 1512 aaKnown RBP8.73□□□□□ -1.01
LDHC-203ENST00000535809 STRCP1A6NGW2 1772 aa8.73□□□□□ -1.01
LDHC-203ENST00000535809 MLH3Q9UHC1 1453 aa8.72□□□□□ -1.01
LDHC-203ENST00000535809 PITPNM1O00562 1244 aa8.72□□□□□ -1.01
LDHC-203ENST00000535809 AFAP1Q8N556 730 aa8.72□□□□□ -1.01
LDHC-203ENST00000535809 SYNMO15061 1565 aa8.72□□□□□ -1.01
LDHC-203ENST00000535809 CLSPNQ9HAW4 1339 aa8.72□□□□□ -1.01
LDHC-203ENST00000535809 ZMYM3Q14202 1370 aa8.72□□□□□ -1.01
LDHC-203ENST00000535809 PRXQ9BXM0 1461 aa8.71□□□□□ -1.01
LDHC-203ENST00000535809 UPF1Q92900 1129 aaKnown RBP eCLIP8.71□□□□□ -1.02
LDHC-203ENST00000535809 KIDINS220Q9ULH0 1771 aa8.71□□□□□ -1.02
LDHC-203ENST00000535809 ARHGAP5Q13017 1502 aa8.7□□□□□ -1.02
LDHC-203ENST00000535809 KIF14Q15058 1648 aa8.7□□□□□ -1.02
LDHC-203ENST00000535809 HAP1P54257 671 aaPredicted RBP8.7□□□□□ -1.02
LDHC-203ENST00000535809 RSPH6AQ9H0K4 717 aa8.7□□□□□ -1.02
LDHC-203ENST00000535809 ANO8Q9HCE9 1232 aaPredicted RBP8.7□□□□□ -1.02
LDHC-203ENST00000535809 A2ML1A8K2U0 1454 aa8.7□□□□□ -1.02
LDHC-203ENST00000535809 LRRC7Q96NW7 1537 aa8.7□□□□□ -1.02
LDHC-203ENST00000535809 ITSN2Q9NZM3 1697 aa8.69□□□□□ -1.02
LDHC-203ENST00000535809 EFCAB2Q5VUJ9 269 aa8.69□□□□□ -1.02
LDHC-203ENST00000535809 TRIM26Q12899 539 aaPredicted RBP8.68□□□□□ -1.02
LDHC-203ENST00000535809 ABCC1P33527 1531 aa8.68□□□□□ -1.02
LDHC-203ENST00000535809 EVX2Q03828 476 aa8.67□□□□□ -1.02
LDHC-203ENST00000535809 IQGAP1P46940 1657 aa8.66□□□□□ -1.02
LDHC-203ENST00000535809 CDC42BPBQ9Y5S2 1711 aa8.66□□□□□ -1.02
LDHC-203ENST00000535809 XIRP1Q702N8 1843 aaKnown RBP8.65□□□□□ -1.02
LDHC-203ENST00000535809 DEPDC5O75140 1603 aa8.65□□□□□ -1.03
LDHC-203ENST00000535809 NPHP4O75161 1426 aaPredicted RBP8.64□□□□□ -1.03
LDHC-203ENST00000535809 LOC105371045A0A1W2PR82 267 aa8.64□□□□□ -1.03
LDHC-203ENST00000535809 PUS7Q96PZ0 661 aaKnown RBP8.64□□□□□ -1.03
LDHC-203ENST00000535809 PLXNC1O60486 1568 aa8.64□□□□□ -1.03
LDHC-203ENST00000535809 PREX2Q70Z35 1606 aa8.63□□□□□ -1.03
LDHC-203ENST00000535809 MED14O60244 1454 aa8.63□□□□□ -1.03
LDHC-203ENST00000535809 TRIM52Q96A61 297 aa8.62□□□□□ -1.03
LDHC-203ENST00000535809 ROBO1Q9Y6N7 1651 aa8.62□□□□□ -1.03
LDHC-203ENST00000535809 SAMD9LQ8IVG5 1584 aa8.61□□□□□ -1.03
LDHC-203ENST00000535809 AAMPQ13685 434 aa8.61□□□□□ -1.03
LDHC-203ENST00000535809 BCL11BQ9C0K0 894 aaPredicted RBP8.61□□□□□ -1.03
LDHC-203ENST00000535809 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.61□□□□□ -1.03
LDHC-203ENST00000535809 ZC3H13Q5T200 1668 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms