RNA–Protein interactions for RNA: ENST00000535406.5

CDCA3-204, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDCA3, Length 1,327 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-204ENST00000535406 SETD1BQ9UPS6 1966 aaKnown RBP14.69□□□□□ -0.06
CDCA3-204ENST00000535406 DNMT1P26358 1616 aaKnown RBP14.68□□□□□ -0.06
CDCA3-204ENST00000535406 FAM135AQ9P2D6 1515 aa14.68□□□□□ -0.06
CDCA3-204ENST00000535406 ZMYM3Q14202 1370 aa14.68□□□□□ -0.06
CDCA3-204ENST00000535406 KIF3BO15066 747 aa14.67□□□□□ -0.06
CDCA3-204ENST00000535406 KDM5DQ9BY66 1539 aa14.67□□□□□ -0.06
CDCA3-204ENST00000535406 NPATQ14207 1427 aa14.67□□□□□ -0.06
CDCA3-204ENST00000535406 EIF2AK4Q9P2K8 1649 aaKnown RBP14.67□□□□□ -0.06
CDCA3-204ENST00000535406 ABCC5O15440 1437 aa14.66□□□□□ -0.06
CDCA3-204ENST00000535406 DAPK1P53355 1430 aa14.66□□□□□ -0.06
CDCA3-204ENST00000535406 RNF17Q9BXT8 1623 aaKnown RBP14.65□□□□□ -0.06
CDCA3-204ENST00000535406 DUOX2Q9NRD8 1548 aa14.64□□□□□ -0.07
CDCA3-204ENST00000535406 MYO3AQ8NEV4 1616 aa14.63□□□□□ -0.07
CDCA3-204ENST00000535406 PTPRKQ15262 1439 aa14.63□□□□□ -0.07
CDCA3-204ENST00000535406 NPM3O75607 178 aaKnown RBP14.63□□□□□ -0.07
CDCA3-204ENST00000535406 KIF15Q9NS87 1388 aa14.62□□□□□ -0.07
CDCA3-204ENST00000535406 ZC3H13Q5T200 1668 aaKnown RBP14.62□□□□□ -0.07
CDCA3-204ENST00000535406 ZNF142P52746 1687 aaPredicted RBP14.61□□□□□ -0.07
CDCA3-204ENST00000535406 ERBINQ96RT1 1412 aa14.61□□□□□ -0.07
CDCA3-204ENST00000535406 WASHC2CQ9Y4E1 1318 aa14.6□□□□□ -0.07
CDCA3-204ENST00000535406 PZPP20742 1482 aa14.6□□□□□ -0.07
CDCA3-204ENST00000535406 MROH1Q8NDA8 1641 aa14.59□□□□□ -0.07
CDCA3-204ENST00000535406 ANKRD30AQ9BXX3 1397 aa14.59□□□□□ -0.07
CDCA3-204ENST00000535406 FAM50AQ14320 339 aaKnown RBP14.59□□□□□ -0.07
CDCA3-204ENST00000535406 ABCC3O15438 1527 aa14.59□□□□□ -0.07
CDCA3-204ENST00000535406 STRCQ7RTU9 1775 aa14.58□□□□□ -0.07
CDCA3-204ENST00000535406 CEP170BQ9Y4F5 1589 aaPredicted RBP14.58□□□□□ -0.08
CDCA3-204ENST00000535406 RRP7BPQ9NSQ0 103 aa14.58□□□□□ -0.08
CDCA3-204ENST00000535406 PRDM15P57071 1507 aaPredicted RBP14.58□□□□□ -0.08
CDCA3-204ENST00000535406 ADGRL2O95490 1459 aa14.56□□□□□ -0.08
CDCA3-204ENST00000535406 CEP152O94986 1710 aa14.56□□□□□ -0.08
CDCA3-204ENST00000535406 CHIC2Q9UKJ5 165 aa14.56□□□□□ -0.08
CDCA3-204ENST00000535406 CAMSAP1Q5T5Y3 1602 aa14.56□□□□□ -0.08
CDCA3-204ENST00000535406 NCOA1Q15788 1441 aa14.55□□□□□ -0.08
CDCA3-204ENST00000535406 DEPDC5O75140 1603 aa14.55□□□□□ -0.08
CDCA3-204ENST00000535406 TNRQ92752 1358 aa14.54□□□□□ -0.08
CDCA3-204ENST00000535406 A2ML1A8K2U0 1454 aa14.53□□□□□ -0.08
CDCA3-204ENST00000535406 PPARGC1BQ86YN6 1023 aaKnown RBP14.53□□□□□ -0.08
CDCA3-204ENST00000535406 PLA2R1Q13018 1463 aa14.52□□□□□ -0.08
CDCA3-204ENST00000535406 FBXO31Q5XUX0 539 aaPredicted RBP14.52□□□□□ -0.08
CDCA3-204ENST00000535406 DMRT2Q9Y5R5 561 aa14.52□□□□□ -0.08
CDCA3-204ENST00000535406 SPATA31D1Q6ZQQ2 1576 aa14.51□□□□□ -0.09
CDCA3-204ENST00000535406 KANK1Q14678 1352 aa14.5□□□□□ -0.09
CDCA3-204ENST00000535406 PTPRTO14522 1441 aa14.5□□□□□ -0.09
CDCA3-204ENST00000535406 ERVK-7P63135 1459 aa14.5□□□□□ -0.09
CDCA3-204ENST00000535406 NLRP1Q9C000 1473 aa14.5□□□□□ -0.09
CDCA3-204ENST00000535406 CNKSR2Q8WXI2 1034 aa14.49□□□□□ -0.09
CDCA3-204ENST00000535406 ILDR1Q86SU0 546 aaPredicted RBP14.48□□□□□ -0.09
CDCA3-204ENST00000535406 ANKRD50Q9ULJ7 1429 aa14.48□□□□□ -0.09
CDCA3-204ENST00000535406 VWDEQ8N2E2 1590 aa14.47□□□□□ -0.09
CDCA3-204ENST00000535406 ARHGAP31Q2M1Z3 1444 aa14.47□□□□□ -0.09
CDCA3-204ENST00000535406 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.47□□□□□ -0.09
CDCA3-204ENST00000535406 SCAF1Q9H7N4 1312 aaKnown RBP14.47□□□□□ -0.09
CDCA3-204ENST00000535406 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.47□□□□□ -0.097e-9■■■□□ 17.5
CDCA3-204ENST00000535406 UGGT1Q9NYU2 1555 aa14.47□□□□□ -0.09
CDCA3-204ENST00000535406 LMTK2Q8IWU2 1503 aa14.47□□□□□ -0.09
CDCA3-204ENST00000535406 ROCK1Q13464 1354 aa14.46□□□□□ -0.09
CDCA3-204ENST00000535406 POLR1AO95602 1720 aaPredicted RBP14.46□□□□□ -0.09
CDCA3-204ENST00000535406 PKD2Q13563 968 aa14.45□□□□□ -0.1
CDCA3-204ENST00000535406 CFAP65Q6ZU64 1925 aaKnown RBP14.45□□□□□ -0.1
CDCA3-204ENST00000535406 NCKAP5LQ9HCH0 1330 aa14.44□□□□□ -0.1
CDCA3-204ENST00000535406 EFCAB6Q5THR3 1501 aa14.44□□□□□ -0.1
CDCA3-204ENST00000535406 RRBP1Q9P2E9 1410 aaKnown RBP14.44□□□□□ -0.1
CDCA3-204ENST00000535406 UNC13BO14795 1591 aa14.43□□□□□ -0.1
CDCA3-204ENST00000535406 ITGAEP38570 1179 aa14.43□□□□□ -0.1
CDCA3-204ENST00000535406 FBXO41Q8TF61 875 aa14.41□□□□□ -0.1
CDCA3-204ENST00000535406 NEURL4Q96JN8 1562 aa14.41□□□□□ -0.1
CDCA3-204ENST00000535406 THEMISQ8N1K5 641 aaPredicted RBP14.41□□□□□ -0.1
CDCA3-204ENST00000535406 CERKQ8TCT0 537 aa14.41□□□□□ -0.1
CDCA3-204ENST00000535406 UBR1Q8IWV7 1749 aa14.4□□□□□ -0.1
CDCA3-204ENST00000535406 TET3O43151 1660 aa14.4□□□□□ -0.1
CDCA3-204ENST00000535406 GCC2Q8IWJ2 1684 aa14.39□□□□□ -0.11
CDCA3-204ENST00000535406 LTBP4Q8N2S1 1624 aa14.38□□□□□ -0.11
CDCA3-204ENST00000535406 RPRD2Q5VT52 1461 aaKnown RBP14.38□□□□□ -0.11
CDCA3-204ENST00000535406 PIK3C2BO00750 1634 aa14.38□□□□□ -0.11
CDCA3-204ENST00000535406 SYNMO15061 1565 aa14.37□□□□□ -0.11
CDCA3-204ENST00000535406 IQGAP3Q86VI3 1631 aa14.37□□□□□ -0.11
CDCA3-204ENST00000535406 ANKLE2Q86XL3 938 aa14.37□□□□□ -0.11
CDCA3-204ENST00000535406 NOS1P29475 1434 aa14.36□□□□□ -0.11
CDCA3-204ENST00000535406 IQGAP1P46940 1657 aa14.36□□□□□ -0.11
CDCA3-204ENST00000535406 KDM5AP29375 1690 aaKnown RBP14.35□□□□□ -0.11
CDCA3-204ENST00000535406 MED14O60244 1454 aa14.35□□□□□ -0.11
CDCA3-204ENST00000535406 NPHP4O75161 1426 aaPredicted RBP14.34□□□□□ -0.11
CDCA3-204ENST00000535406 ZNF335Q9H4Z2 1342 aaPredicted RBP14.34□□□□□ -0.11
CDCA3-204ENST00000535406 SLIT1O75093 1534 aa14.34□□□□□ -0.11
CDCA3-204ENST00000535406 SCAF11Q99590 1463 aaKnown RBP14.33□□□□□ -0.12
CDCA3-204ENST00000535406 ADGRB3O60242 1522 aa14.33□□□□□ -0.12
CDCA3-204ENST00000535406 MSH5O43196 834 aa14.33□□□□□ -0.12
CDCA3-204ENST00000535406 E9PCH4 1651 aa14.33□□□□□ -0.12
CDCA3-204ENST00000535406 IQSEC2Q5JU85 1478 aa14.32□□□□□ -0.12
CDCA3-204ENST00000535406 ARHGAP23Q9P227 1491 aa14.32□□□□□ -0.12
CDCA3-204ENST00000535406 STAG3Q9UJ98 1225 aa14.32□□□□□ -0.12
CDCA3-204ENST00000535406 NUP155O75694 1391 aa14.31□□□□□ -0.12
CDCA3-204ENST00000535406 NAIPQ13075 1403 aa14.3□□□□□ -0.12
CDCA3-204ENST00000535406 IDI1Q13907 227 aa14.3□□□□□ -0.12
CDCA3-204ENST00000535406 SLC52A1Q9NWF4 448 aa14.3□□□□□ -0.12
CDCA3-204ENST00000535406 CPS1P31327 1500 aa14.29□□□□□ -0.12
CDCA3-204ENST00000535406 TMEM2Q9UHN6 1383 aa14.29□□□□□ -0.12
CDCA3-204ENST00000535406 HFM1A2PYH4 1435 aa14.28□□□□□ -0.12
CDCA3-204ENST00000535406 TXNDC2Q86VQ3 553 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms