RNA–Protein interactions for RNA: ENST00000535297.1

TMEM258-203, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-203ENST00000535297 ZMYM3Q14202 1370 aa21.38■■□□□ 1.01
TMEM258-203ENST00000535297 KDM5DQ9BY66 1539 aa21.38■■□□□ 1.01
TMEM258-203ENST00000535297 KIF15Q9NS87 1388 aa21.35■■□□□ 1.01
TMEM258-203ENST00000535297 ERBINQ96RT1 1412 aa21.33■■□□□ 1.01
TMEM258-203ENST00000535297 ZC3H13Q5T200 1668 aaKnown RBP21.32■■□□□ 1
TMEM258-203ENST00000535297 HSPA2P54652 639 aa21.32■■□□□ 1
TMEM258-203ENST00000535297 PTPRKQ15262 1439 aa21.31■■□□□ 1
TMEM258-203ENST00000535297 MROH1Q8NDA8 1641 aa21.31■■□□□ 1
TMEM258-203ENST00000535297 ANKRD30AQ9BXX3 1397 aa21.31■■□□□ 1
TMEM258-203ENST00000535297 ADGRL2O95490 1459 aa21.31■■□□□ 1
TMEM258-203ENST00000535297 FAM50AQ14320 339 aaKnown RBP21.3■■□□□ 1
TMEM258-203ENST00000535297 MYO3AQ8NEV4 1616 aa21.29■■□□□ 1
TMEM258-203ENST00000535297 PZPP20742 1482 aa21.28■■□□□ 1
TMEM258-203ENST00000535297 WASHC2CQ9Y4E1 1318 aa21.28■■□□□ 1
TMEM258-203ENST00000535297 ZNF142P52746 1687 aaPredicted RBP21.28■■□□□ 1
TMEM258-203ENST00000535297 ABCC3O15438 1527 aa21.27■■□□□ 1
TMEM258-203ENST00000535297 PRDM15P57071 1507 aaPredicted RBP21.27■■□□□ 1
TMEM258-203ENST00000535297 NCOA1Q15788 1441 aa21.27■■□□□ 1
TMEM258-203ENST00000535297 DEPDC5O75140 1603 aa21.26■□□□□ 0.99
TMEM258-203ENST00000535297 RRP7BPQ9NSQ0 103 aa21.26■□□□□ 0.99
TMEM258-203ENST00000535297 CHIC2Q9UKJ5 165 aa21.24■□□□□ 0.99
TMEM258-203ENST00000535297 CEP152O94986 1710 aa21.24■□□□□ 0.99
TMEM258-203ENST00000535297 CEP170BQ9Y4F5 1589 aaPredicted RBP21.23■□□□□ 0.99
TMEM258-203ENST00000535297 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.23■□□□□ 0.993e-7■□□□□ 11
TMEM258-203ENST00000535297 CAMSAP1Q5T5Y3 1602 aa21.22■□□□□ 0.99
TMEM258-203ENST00000535297 PPARGC1BQ86YN6 1023 aaKnown RBP21.21■□□□□ 0.99
TMEM258-203ENST00000535297 STRCQ7RTU9 1775 aa21.2■□□□□ 0.99
TMEM258-203ENST00000535297 TNRQ92752 1358 aa21.19■□□□□ 0.98
TMEM258-203ENST00000535297 ROCK1Q13464 1354 aa21.17■□□□□ 0.98
TMEM258-203ENST00000535297 A2ML1A8K2U0 1454 aa21.17■□□□□ 0.98
TMEM258-203ENST00000535297 SPATA31D1Q6ZQQ2 1576 aa21.17■□□□□ 0.98
TMEM258-203ENST00000535297 VWDEQ8N2E2 1590 aa21.16■□□□□ 0.98
TMEM258-203ENST00000535297 RRBP1Q9P2E9 1410 aaKnown RBP21.16■□□□□ 0.98
TMEM258-203ENST00000535297 ANKRD50Q9ULJ7 1429 aa21.15■□□□□ 0.98
TMEM258-203ENST00000535297 KANK1Q14678 1352 aa21.15■□□□□ 0.98
TMEM258-203ENST00000535297 FBXO31Q5XUX0 539 aaPredicted RBP21.15■□□□□ 0.98
TMEM258-203ENST00000535297 PLA2R1Q13018 1463 aa21.14■□□□□ 0.98
TMEM258-203ENST00000535297 LMTK2Q8IWU2 1503 aa21.14■□□□□ 0.97
TMEM258-203ENST00000535297 ERVK-7P63135 1459 aa21.13■□□□□ 0.97
TMEM258-203ENST00000535297 NLRP1Q9C000 1473 aa21.13■□□□□ 0.97
TMEM258-203ENST00000535297 ARHGAP31Q2M1Z3 1444 aa21.13■□□□□ 0.97
TMEM258-203ENST00000535297 DMRT2Q9Y5R5 561 aa21.12■□□□□ 0.97
TMEM258-203ENST00000535297 PTPRTO14522 1441 aa21.11■□□□□ 0.97
TMEM258-203ENST00000535297 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.1■□□□□ 0.97
TMEM258-203ENST00000535297 UNC13BO14795 1591 aa21.09■□□□□ 0.97
TMEM258-203ENST00000535297 EFCAB6Q5THR3 1501 aa21.07■□□□□ 0.96
TMEM258-203ENST00000535297 CFAP65Q6ZU64 1925 aaKnown RBP21.06■□□□□ 0.96
TMEM258-203ENST00000535297 UGGT1Q9NYU2 1555 aa21.06■□□□□ 0.96
TMEM258-203ENST00000535297 ITGAEP38570 1179 aa21.05■□□□□ 0.96
TMEM258-203ENST00000535297 PKD2Q13563 968 aa21.04■□□□□ 0.96
TMEM258-203ENST00000535297 TET3O43151 1660 aa21.03■□□□□ 0.96
TMEM258-203ENST00000535297 POLR1AO95602 1720 aaPredicted RBP21.03■□□□□ 0.96
TMEM258-203ENST00000535297 GCC2Q8IWJ2 1684 aa21.01■□□□□ 0.95
TMEM258-203ENST00000535297 RPRD2Q5VT52 1461 aaKnown RBP21.01■□□□□ 0.95
TMEM258-203ENST00000535297 NCKAP5LQ9HCH0 1330 aa21■□□□□ 0.95
TMEM258-203ENST00000535297 IQGAP3Q86VI3 1631 aa21■□□□□ 0.95
TMEM258-203ENST00000535297 UBR1Q8IWV7 1749 aa20.99■□□□□ 0.95
TMEM258-203ENST00000535297 THEMISQ8N1K5 641 aaPredicted RBP20.99■□□□□ 0.95
TMEM258-203ENST00000535297 NEURL4Q96JN8 1562 aa20.97■□□□□ 0.95
TMEM258-203ENST00000535297 NOS1P29475 1434 aa20.97■□□□□ 0.95
TMEM258-203ENST00000535297 SYNMO15061 1565 aa20.97■□□□□ 0.95
TMEM258-203ENST00000535297 PIK3C2BO00750 1634 aa20.95■□□□□ 0.94
TMEM258-203ENST00000535297 KDM5AP29375 1690 aaKnown RBP20.95■□□□□ 0.94
TMEM258-203ENST00000535297 NAIPQ13075 1403 aa20.93■□□□□ 0.94
TMEM258-203ENST00000535297 ILDR1Q86SU0 546 aaPredicted RBP20.92■□□□□ 0.94
TMEM258-203ENST00000535297 ANKLE2Q86XL3 938 aa20.92■□□□□ 0.94
TMEM258-203ENST00000535297 MED14O60244 1454 aa20.92■□□□□ 0.94
TMEM258-203ENST00000535297 LTBP4Q8N2S1 1624 aa20.92■□□□□ 0.94
TMEM258-203ENST00000535297 E9PCH4 1651 aa20.92■□□□□ 0.94
TMEM258-203ENST00000535297 HFM1A2PYH4 1435 aa20.91■□□□□ 0.94
TMEM258-203ENST00000535297 SLIT1O75093 1534 aa20.91■□□□□ 0.94
TMEM258-203ENST00000535297 NUP155O75694 1391 aa20.91■□□□□ 0.94
TMEM258-203ENST00000535297 CERKQ8TCT0 537 aa20.91■□□□□ 0.94
TMEM258-203ENST00000535297 ARHGAP23Q9P227 1491 aa20.9■□□□□ 0.94
TMEM258-203ENST00000535297 FBXO41Q8TF61 875 aa20.89■□□□□ 0.93
TMEM258-203ENST00000535297 ADGRB3O60242 1522 aa20.88■□□□□ 0.93
TMEM258-203ENST00000535297 NPHP4O75161 1426 aaPredicted RBP20.88■□□□□ 0.93
TMEM258-203ENST00000535297 IQGAP1P46940 1657 aa20.88■□□□□ 0.93
TMEM258-203ENST00000535297 SCAF11Q99590 1463 aaKnown RBP20.87■□□□□ 0.93
TMEM258-203ENST00000535297 SLC52A1Q9NWF4 448 aa20.86■□□□□ 0.93
TMEM258-203ENST00000535297 IDI1Q13907 227 aa20.85■□□□□ 0.93
TMEM258-203ENST00000535297 IQSEC2Q5JU85 1478 aa20.84■□□□□ 0.93
TMEM258-203ENST00000535297 TMEM2Q9UHN6 1383 aa20.84■□□□□ 0.93
TMEM258-203ENST00000535297 ZNF335Q9H4Z2 1342 aaPredicted RBP20.83■□□□□ 0.93
TMEM258-203ENST00000535297 STAG3Q9UJ98 1225 aa20.83■□□□□ 0.93
TMEM258-203ENST00000535297 SPHKAPQ2M3C7 1700 aa20.8■□□□□ 0.92
TMEM258-203ENST00000535297 TMEM131LA2VDJ0 1609 aa20.79■□□□□ 0.92
TMEM258-203ENST00000535297 MYO5BQ9ULV0 1848 aa20.78■□□□□ 0.92
TMEM258-203ENST00000535297 TXNDC2Q86VQ3 553 aa20.78■□□□□ 0.92
TMEM258-203ENST00000535297 EID1Q9Y6B2 187 aa20.78■□□□□ 0.92
TMEM258-203ENST00000535297 CPS1P31327 1500 aa20.78■□□□□ 0.92
TMEM258-203ENST00000535297 LTKP29376 864 aa20.77■□□□□ 0.92
TMEM258-203ENST00000535297 ZFYVE9O95405 1425 aa20.73■□□□□ 0.91
TMEM258-203ENST00000535297 TRPM2O94759 1503 aa20.73■□□□□ 0.91
TMEM258-203ENST00000535297 TRIM52Q96A61 297 aa20.71■□□□□ 0.91
TMEM258-203ENST00000535297 RIMS2Q9UQ26 1411 aa20.7■□□□□ 0.9
TMEM258-203ENST00000535297 STRCP1A6NGW2 1772 aa20.69■□□□□ 0.9
TMEM258-203ENST00000535297 CLTCL1P53675 1640 aa20.68■□□□□ 0.9
TMEM258-203ENST00000535297 CHGAP10645 457 aaKnown RBP20.67■□□□□ 0.9
TMEM258-203ENST00000535297 HDGFP51858 240 aaKnown RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms