RNA–Protein interactions for RNA: ENST00000533105.1

NDUFS3-210, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 4

Gene NDUFS3, Length 567 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-210ENST00000533105 KDM5DQ9BY66 1539 aa33.94■■■■□ 3.02
NDUFS3-210ENST00000533105 DNMT1P26358 1616 aaKnown RBP33.93■■■■□ 3.02
NDUFS3-210ENST00000533105 CROCC2H7BZ55 1655 aa33.93■■■■□ 3.02
NDUFS3-210ENST00000533105 CHIC2Q9UKJ5 165 aa33.92■■■■□ 3.02
NDUFS3-210ENST00000533105 KIF15Q9NS87 1388 aa33.92■■■■□ 3.02
NDUFS3-210ENST00000533105 DUOX2Q9NRD8 1548 aa33.91■■■■□ 3.02
NDUFS3-210ENST00000533105 FAM135AQ9P2D6 1515 aa33.89■■■■□ 3.02
NDUFS3-210ENST00000533105 ILDR1Q86SU0 546 aaPredicted RBP33.88■■■■□ 3.01
NDUFS3-210ENST00000533105 PPARGC1BQ86YN6 1023 aaKnown RBP33.88■■■■□ 3.01
NDUFS3-210ENST00000533105 FBXO31Q5XUX0 539 aaPredicted RBP33.87■■■■□ 3.01
NDUFS3-210ENST00000533105 EIF2AK4Q9P2K8 1649 aaKnown RBP33.86■■■■□ 3.01
NDUFS3-210ENST00000533105 RNF17Q9BXT8 1623 aaKnown RBP33.86■■■■□ 3.01
NDUFS3-210ENST00000533105 DMRT2Q9Y5R5 561 aa33.85■■■■□ 3.01
NDUFS3-210ENST00000533105 ANKRD30AQ9BXX3 1397 aa33.84■■■■□ 3.01
NDUFS3-210ENST00000533105 MYO3AQ8NEV4 1616 aa33.83■■■■□ 3.01
NDUFS3-210ENST00000533105 STRCQ7RTU9 1775 aa33.83■■■■□ 3.01
NDUFS3-210ENST00000533105 PZPP20742 1482 aa33.82■■■■□ 3.01
NDUFS3-210ENST00000533105 ERBINQ96RT1 1412 aa33.8■■■■□ 3
NDUFS3-210ENST00000533105 TNRQ92752 1358 aa33.79■■■■□ 3
NDUFS3-210ENST00000533105 ABCC3O15438 1527 aa33.79■■■■□ 3
NDUFS3-210ENST00000533105 CAMSAP1Q5T5Y3 1602 aa33.78■■■■□ 3
NDUFS3-210ENST00000533105 NCOA1Q15788 1441 aa33.78■■■■□ 3
NDUFS3-210ENST00000533105 CEP170BQ9Y4F5 1589 aaPredicted RBP33.77■■■■□ 3
NDUFS3-210ENST00000533105 MROH1Q8NDA8 1641 aa33.76■■■■□ 3
NDUFS3-210ENST00000533105 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.75■■■□□ 2.99
NDUFS3-210ENST00000533105 ZNF142P52746 1687 aaPredicted RBP33.74■■■□□ 2.99
NDUFS3-210ENST00000533105 ZC3H13Q5T200 1668 aaKnown RBP33.73■■■□□ 2.99
NDUFS3-210ENST00000533105 A2ML1A8K2U0 1454 aa33.71■■■□□ 2.99
NDUFS3-210ENST00000533105 NCKAP5LQ9HCH0 1330 aa33.71■■■□□ 2.99
NDUFS3-210ENST00000533105 PTPRTO14522 1441 aa33.7■■■□□ 2.98
NDUFS3-210ENST00000533105 ADGRL2O95490 1459 aa33.69■■■□□ 2.98
NDUFS3-210ENST00000533105 CEP152O94986 1710 aa33.67■■■□□ 2.98
NDUFS3-210ENST00000533105 PRDM15P57071 1507 aaPredicted RBP33.67■■■□□ 2.98
NDUFS3-210ENST00000533105 KANK1Q14678 1352 aa33.65■■■□□ 2.98
NDUFS3-210ENST00000533105 FBXO41Q8TF61 875 aa33.65■■■□□ 2.98
NDUFS3-210ENST00000533105 PLA2R1Q13018 1463 aa33.64■■■□□ 2.98
NDUFS3-210ENST00000533105 CERKQ8TCT0 537 aa33.63■■■□□ 2.97
NDUFS3-210ENST00000533105 PKD2Q13563 968 aa33.62■■■□□ 2.97
NDUFS3-210ENST00000533105 ITGAEP38570 1179 aa33.61■■■□□ 2.97
NDUFS3-210ENST00000533105 NLRP1Q9C000 1473 aa33.61■■■□□ 2.97
NDUFS3-210ENST00000533105 DEPDC5O75140 1603 aa33.61■■■□□ 2.97
NDUFS3-210ENST00000533105 ERVK-7P63135 1459 aa33.6■■■□□ 2.97
NDUFS3-210ENST00000533105 SPATA31D1Q6ZQQ2 1576 aa33.59■■■□□ 2.97
NDUFS3-210ENST00000533105 ANKRD50Q9ULJ7 1429 aa33.58■■■□□ 2.97
NDUFS3-210ENST00000533105 THEMISQ8N1K5 641 aaPredicted RBP33.55■■■□□ 2.96
NDUFS3-210ENST00000533105 ARHGAP31Q2M1Z3 1444 aa33.54■■■□□ 2.96
NDUFS3-210ENST00000533105 UGGT1Q9NYU2 1555 aa33.54■■■□□ 2.96
NDUFS3-210ENST00000533105 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.53■■■□□ 2.96
NDUFS3-210ENST00000533105 CFAP65Q6ZU64 1925 aaKnown RBP33.53■■■□□ 2.96
NDUFS3-210ENST00000533105 ROCK1Q13464 1354 aa33.49■■■□□ 2.95
NDUFS3-210ENST00000533105 VWDEQ8N2E2 1590 aa33.48■■■□□ 2.95
NDUFS3-210ENST00000533105 LMTK2Q8IWU2 1503 aa33.48■■■□□ 2.95
NDUFS3-210ENST00000533105 ANKLE2Q86XL3 938 aa33.47■■■□□ 2.95
NDUFS3-210ENST00000533105 ZNF335Q9H4Z2 1342 aaPredicted RBP33.43■■■□□ 2.94
NDUFS3-210ENST00000533105 LTBP4Q8N2S1 1624 aa33.41■■■□□ 2.94
NDUFS3-210ENST00000533105 POLR1AO95602 1720 aaPredicted RBP33.4■■■□□ 2.94
NDUFS3-210ENST00000533105 RRBP1Q9P2E9 1410 aaKnown RBP33.39■■■□□ 2.94
NDUFS3-210ENST00000533105 NEURL4Q96JN8 1562 aa33.38■■■□□ 2.93
NDUFS3-210ENST00000533105 EFCAB6Q5THR3 1501 aa33.38■■■□□ 2.93
NDUFS3-210ENST00000533105 STAG3Q9UJ98 1225 aa33.34■■■□□ 2.93
NDUFS3-210ENST00000533105 UBR1Q8IWV7 1749 aa33.33■■■□□ 2.93
NDUFS3-210ENST00000533105 UNC13BO14795 1591 aa33.32■■■□□ 2.92
NDUFS3-210ENST00000533105 NPHP4O75161 1426 aaPredicted RBP33.32■■■□□ 2.92
NDUFS3-210ENST00000533105 IDI1Q13907 227 aa33.31■■■□□ 2.92
NDUFS3-210ENST00000533105 NOS1P29475 1434 aa33.29■■■□□ 2.92
NDUFS3-210ENST00000533105 PIK3C2BO00750 1634 aa33.28■■■□□ 2.92
NDUFS3-210ENST00000533105 MED14O60244 1454 aa33.28■■■□□ 2.92
NDUFS3-210ENST00000533105 SYNMO15061 1565 aa33.28■■■□□ 2.92
NDUFS3-210ENST00000533105 TET3O43151 1660 aa33.27■■■□□ 2.92
NDUFS3-210ENST00000533105 RPRD2Q5VT52 1461 aaKnown RBP33.26■■■□□ 2.92
NDUFS3-210ENST00000533105 NUP155O75694 1391 aa33.26■■■□□ 2.92
NDUFS3-210ENST00000533105 TXNDC2Q86VQ3 553 aa33.25■■■□□ 2.91
NDUFS3-210ENST00000533105 LTKP29376 864 aa33.23■■■□□ 2.91
NDUFS3-210ENST00000533105 SLC52A1Q9NWF4 448 aa33.23■■■□□ 2.91
NDUFS3-210ENST00000533105 EID1Q9Y6B2 187 aa33.23■■■□□ 2.91
NDUFS3-210ENST00000533105 SCAF11Q99590 1463 aaKnown RBP33.23■■■□□ 2.91
NDUFS3-210ENST00000533105 IQGAP1P46940 1657 aa33.22■■■□□ 2.91
NDUFS3-210ENST00000533105 IQSEC2Q5JU85 1478 aa33.21■■■□□ 2.91
NDUFS3-210ENST00000533105 ARHGAP23Q9P227 1491 aa33.21■■■□□ 2.91
NDUFS3-210ENST00000533105 SLIT1O75093 1534 aa33.21■■■□□ 2.91
NDUFS3-210ENST00000533105 GCC2Q8IWJ2 1684 aa33.2■■■□□ 2.91
NDUFS3-210ENST00000533105 IQGAP3Q86VI3 1631 aa33.19■■■□□ 2.9
NDUFS3-210ENST00000533105 TMEM2Q9UHN6 1383 aa33.19■■■□□ 2.9
NDUFS3-210ENST00000533105 E9PCH4 1651 aa33.13■■■□□ 2.89
NDUFS3-210ENST00000533105 ADGRB3O60242 1522 aa33.13■■■□□ 2.89
NDUFS3-210ENST00000533105 NAIPQ13075 1403 aa33.13■■■□□ 2.89
NDUFS3-210ENST00000533105 KDM5AP29375 1690 aaKnown RBP33.13■■■□□ 2.89
NDUFS3-210ENST00000533105 CPS1P31327 1500 aa33.12■■■□□ 2.89
NDUFS3-210ENST00000533105 UBAP1LF5GYI3 381 aa33.09■■■□□ 2.89
NDUFS3-210ENST00000533105 CHGAP10645 457 aaKnown RBP33.09■■■□□ 2.89
NDUFS3-210ENST00000533105 HFM1A2PYH4 1435 aa33.04■■■□□ 2.88
NDUFS3-210ENST00000533105 TRIM52Q96A61 297 aa33.02■■■□□ 2.88
NDUFS3-210ENST00000533105 BCANQ96GW7 911 aa33.02■■■□□ 2.88
NDUFS3-210ENST00000533105 SENP3Q9H4L4 574 aaPredicted RBP33■■■□□ 2.87
NDUFS3-210ENST00000533105 TMEM131LA2VDJ0 1609 aa32.99■■■□□ 2.87
NDUFS3-210ENST00000533105 PPP1R15AO75807 674 aaPredicted RBP32.98■■■□□ 2.87
NDUFS3-210ENST00000533105 SLC26A8Q96RN1 970 aa32.98■■■□□ 2.87
NDUFS3-210ENST00000533105 RIMS2Q9UQ26 1411 aa32.97■■■□□ 2.87
NDUFS3-210ENST00000533105 HDGFP51858 240 aaKnown RBP32.97■■■□□ 2.87
NDUFS3-210ENST00000533105 STRCP1A6NGW2 1772 aa32.96■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms