RNA–Protein interactions for RNA: ENST00000532925.5

ATPAF1-210, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-210ENST00000532925 ARHGAP35Q9NRY4 1499 aa8.72□□□□□ -1.01
ATPAF1-210ENST00000532925 URB2Q14146 1524 aaKnown RBP8.72□□□□□ -1.01
ATPAF1-210ENST00000532925 CTTNBP2Q8WZ74 1663 aa8.72□□□□□ -1.01
ATPAF1-210ENST00000532925 KIF21AQ7Z4S6 1674 aa8.7□□□□□ -1.02
ATPAF1-210ENST00000532925 PPP1R37O75864 691 aa8.7□□□□□ -1.02
ATPAF1-210ENST00000532925 LSM11P83369 360 aaKnown RBP eCLIP8.69□□□□□ -1.02
ATPAF1-210ENST00000532925 LHX6Q9UPM6 363 aa8.69□□□□□ -1.02
ATPAF1-210ENST00000532925 PCDHGA4Q9Y5G9 962 aa8.69□□□□□ -1.02
ATPAF1-210ENST00000532925 FHAD1B1AJZ9 1412 aa8.69□□□□□ -1.02
ATPAF1-210ENST00000532925 PTGER2P43116 358 aa8.68□□□□□ -1.02
ATPAF1-210ENST00000532925 TMC2Q8TDI7 906 aa8.68□□□□□ -1.02
ATPAF1-210ENST00000532925 AQRO60306 1485 aaKnown RBP eCLIP8.67□□□□□ -1.02
ATPAF1-210ENST00000532925 TARBP1Q13395 1621 aaKnown RBP8.67□□□□□ -1.02
ATPAF1-210ENST00000532925 POTEEQ6S8J3 1075 aa8.67□□□□□ -1.02
ATPAF1-210ENST00000532925 CFAP43Q8NDM7 1665 aa8.66□□□□□ -1.02
ATPAF1-210ENST00000532925 RAD54L2Q9Y4B4 1467 aa8.66□□□□□ -1.02
ATPAF1-210ENST00000532925 RRBP1Q9P2E9 1410 aaKnown RBP8.66□□□□□ -1.02
ATPAF1-210ENST00000532925 SLC34A2O95436 690 aa8.66□□□□□ -1.02
ATPAF1-210ENST00000532925 AXIN2Q9Y2T1 843 aa8.66□□□□□ -1.02
ATPAF1-210ENST00000532925 TIAM1Q13009 1591 aa8.65□□□□□ -1.02
ATPAF1-210ENST00000532925 MRC2Q9UBG0 1479 aa8.65□□□□□ -1.02
ATPAF1-210ENST00000532925 GAPVD1Q14C86 1478 aa8.64□□□□□ -1.03
ATPAF1-210ENST00000532925 FYCO1Q9BQS8 1478 aa8.64□□□□□ -1.03
ATPAF1-210ENST00000532925 SAMD9Q5K651 1589 aa8.63□□□□□ -1.03
ATPAF1-210ENST00000532925 THOC2Q8NI27 1593 aaKnown RBP8.63□□□□□ -1.03
ATPAF1-210ENST00000532925 WDR62O43379 1518 aa8.63□□□□□ -1.03
ATPAF1-210ENST00000532925 PBRM1Q86U86 1689 aa8.62□□□□□ -1.03
ATPAF1-210ENST00000532925 CLSPNQ9HAW4 1339 aa8.62□□□□□ -1.03
ATPAF1-210ENST00000532925 PBX2P40425 430 aa8.62□□□□□ -1.03
ATPAF1-210ENST00000532925 PPARGC1BQ86YN6 1023 aaKnown RBP8.62□□□□□ -1.03
ATPAF1-210ENST00000532925 FMN1Q68DA7 1419 aa8.61□□□□□ -1.03
ATPAF1-210ENST00000532925 IFT140Q96RY7 1462 aa8.6□□□□□ -1.03
ATPAF1-210ENST00000532925 CASKIN1Q8WXD9 1431 aa8.6□□□□□ -1.03
ATPAF1-210ENST00000532925 PCF11O94913 1555 aaKnown RBP8.6□□□□□ -1.03
ATPAF1-210ENST00000532925 CCER1Q8TC90 406 aaPredicted RBP8.59□□□□□ -1.03
ATPAF1-210ENST00000532925 ADAMTS12P58397 1594 aa8.59□□□□□ -1.03
ATPAF1-210ENST00000532925 LRRC9Q6ZRR7 1453 aa8.58□□□□□ -1.04
ATPAF1-210ENST00000532925 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.58□□□□□ -1.04
ATPAF1-210ENST00000532925 KDM4FA0A1W2PPD8 638 aa8.57□□□□□ -1.04
ATPAF1-210ENST00000532925 GRIN2BQ13224 1484 aa8.57□□□□□ -1.04
ATPAF1-210ENST00000532925 FOXK1P85037 733 aa8.56□□□□□ -1.04
ATPAF1-210ENST00000532925 PLPP6Q8IY26 295 aa8.56□□□□□ -1.04
ATPAF1-210ENST00000532925 HS6ST3Q8IZP7 471 aa8.56□□□□□ -1.04
ATPAF1-210ENST00000532925 CCNB3Q8WWL7 1395 aa8.56□□□□□ -1.04
ATPAF1-210ENST00000532925 SNAPC4Q5SXM2 1469 aa8.56□□□□□ -1.04
ATPAF1-210ENST00000532925 ADGRD1Q6QNK2 874 aa8.55□□□□□ -1.04
ATPAF1-210ENST00000532925 PTCD2Q8WV60 388 aaKnown RBP8.55□□□□□ -1.04
ATPAF1-210ENST00000532925 TDRD9Q8NDG6 1382 aaKnown RBP8.54□□□□□ -1.04
ATPAF1-210ENST00000532925 ARHGAP33O14559 1287 aa8.54□□□□□ -1.04
ATPAF1-210ENST00000532925 IQGAP2Q13576 1575 aa8.53□□□□□ -1.04
ATPAF1-210ENST00000532925 PSDA5PKW4 1024 aaPredicted RBP8.53□□□□□ -1.04
ATPAF1-210ENST00000532925 PSEN2P49810 448 aa8.53□□□□□ -1.04
ATPAF1-210ENST00000532925 DSG2Q14126 1118 aa8.53□□□□□ -1.04
ATPAF1-210ENST00000532925 DMRTA1Q5VZB9 504 aa8.53□□□□□ -1.04
ATPAF1-210ENST00000532925 GPHNQ9NQX3 736 aaPredicted RBP8.53□□□□□ -1.04
ATPAF1-210ENST00000532925 UGGT2Q9NYU1 1516 aa8.53□□□□□ -1.04
ATPAF1-210ENST00000532925 CCDC18Q5T9S5 1454 aa8.52□□□□□ -1.05
ATPAF1-210ENST00000532925 KANK4Q5T7N3 995 aaPredicted RBP8.52□□□□□ -1.05
ATPAF1-210ENST00000532925 FHOD3Q2V2M9 1422 aa8.52□□□□□ -1.05
ATPAF1-210ENST00000532925 EHBP1L1Q8N3D4 1523 aa8.51□□□□□ -1.05
ATPAF1-210ENST00000532925 CHGAP10645 457 aaKnown RBP8.51□□□□□ -1.05
ATPAF1-210ENST00000532925 MAGI1Q96QZ7 1491 aaPredicted RBP8.51□□□□□ -1.05
ATPAF1-210ENST00000532925 RANGAP1P46060 587 aaPredicted RBP8.5□□□□□ -1.05
ATPAF1-210ENST00000532925 HECW1Q76N89 1606 aa8.5□□□□□ -1.05
ATPAF1-210ENST00000532925 TTBK1Q5TCY1 1321 aaPredicted RBP8.5□□□□□ -1.05
ATPAF1-210ENST00000532925 EIF4G3O43432 1585 aaKnown RBP8.49□□□□□ -1.05
ATPAF1-210ENST00000532925 HRO43593 1189 aa8.48□□□□□ -1.05
ATPAF1-210ENST00000532925 NKX1-1Q15270 411 aaPredicted RBP8.48□□□□□ -1.05
ATPAF1-210ENST00000532925 PPP4R3BQ5MIZ7 849 aa8.48□□□□□ -1.05
ATPAF1-210ENST00000532925 PLA2G2EQ9NZK7 142 aa8.48□□□□□ -1.05
ATPAF1-210ENST00000532925 HCSTQ9UBK5 93 aa8.48□□□□□ -1.05
ATPAF1-210ENST00000532925 SUPT6HQ7KZ85 1726 aaKnown RBP8.48□□□□□ -1.05
ATPAF1-210ENST00000532925 ARHGEF11O15085 1522 aa8.48□□□□□ -1.05
ATPAF1-210ENST00000532925 KIAA0586Q9BVV6 1533 aa8.48□□□□□ -1.05
ATPAF1-210ENST00000532925 DHX57Q6P158 1386 aaKnown RBP8.48□□□□□ -1.05
ATPAF1-210ENST00000532925 LRRIQ1Q96JM4 1722 aa8.47□□□□□ -1.05
ATPAF1-210ENST00000532925 TK2O00142 265 aa8.47□□□□□ -1.05
ATPAF1-210ENST00000532925 TBC1D12O60347 775 aa8.47□□□□□ -1.05
ATPAF1-210ENST00000532925 ZNF608Q9ULD9 1512 aaPredicted RBP8.47□□□□□ -1.05
ATPAF1-210ENST00000532925 UPF1Q92900 1129 aaKnown RBP eCLIP8.46□□□□□ -1.06
ATPAF1-210ENST00000532925 PHLDB1Q86UU1 1377 aa8.46□□□□□ -1.06
ATPAF1-210ENST00000532925 ERCC6Q03468 1493 aa8.45□□□□□ -1.06
ATPAF1-210ENST00000532925 GRIN2AQ12879 1464 aa8.45□□□□□ -1.06
ATPAF1-210ENST00000532925 KIAA0556O60303 1618 aa8.45□□□□□ -1.06
ATPAF1-210ENST00000532925 FGD6Q6ZV73 1430 aa8.45□□□□□ -1.06
ATPAF1-210ENST00000532925 KCNK17Q96T54 332 aa8.44□□□□□ -1.06
ATPAF1-210ENST00000532925 SYNJ2O15056 1496 aa8.44□□□□□ -1.06
ATPAF1-210ENST00000532925 OXER1Q8TDS5 423 aa8.43□□□□□ -1.06
ATPAF1-210ENST00000532925 KCTD12Q96CX2 325 aaKnown RBP8.43□□□□□ -1.06
ATPAF1-210ENST00000532925 MTUS2Q5JR59 1369 aa8.43□□□□□ -1.06
ATPAF1-210ENST00000532925 MYOM3Q5VTT5 1437 aa8.43□□□□□ -1.06
ATPAF1-210ENST00000532925 SETD5Q9C0A6 1442 aa8.43□□□□□ -1.06
ATPAF1-210ENST00000532925 CRISPLD2Q9H0B8 497 aa8.42□□□□□ -1.06
ATPAF1-210ENST00000532925 NUP160Q12769 1436 aa8.42□□□□□ -1.06
ATPAF1-210ENST00000532925 AKNAQ7Z591 1439 aa8.42□□□□□ -1.06
ATPAF1-210ENST00000532925 TCOF1Q13428 1488 aaKnown RBP8.42□□□□□ -1.06
ATPAF1-210ENST00000532925 EPRSP07814 1512 aaKnown RBP8.41□□□□□ -1.06
ATPAF1-210ENST00000532925 NCOA2Q15596 1464 aa8.41□□□□□ -1.06
ATPAF1-210ENST00000532925 DNAJC5Q9H3Z4 198 aa8.41□□□□□ -1.06
ATPAF1-210ENST00000532925 DISP1Q96F81 1524 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms