RNA–Protein interactions for RNA: ENST00000532925.5

ATPAF1-210, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-210ENST00000532925 AEBP2Q6ZN18 517 aaPredicted RBP20.42■□□□□ 0.86
ATPAF1-210ENST00000532925 CHIC1Q5VXU3 224 aa19.26■□□□□ 0.67
ATPAF1-210ENST00000532925 SENP3Q9H4L4 574 aaPredicted RBP17.38■□□□□ 0.37
ATPAF1-210ENST00000532925 PHF23Q9BUL5 403 aaPredicted RBP17.16■□□□□ 0.34
ATPAF1-210ENST00000532925 FOXD1Q16676 465 aa16.25■□□□□ 0.19
ATPAF1-210ENST00000532925 PLPPR3Q6T4P5 718 aa15.32■□□□□ 0.04
ATPAF1-210ENST00000532925 MSH5O43196 834 aa15.2■□□□□ 0.02
ATPAF1-210ENST00000532925 PIAS4Q8N2W9 510 aaPredicted RBP15.16■□□□□ 0.02
ATPAF1-210ENST00000532925 PPP6R1Q9UPN7 881 aa15.13■□□□□ 0.01
ATPAF1-210ENST00000532925 ADRA2BP18089 450 aa15.08■□□□□ 0
ATPAF1-210ENST00000532925 POTEDQ86YR6 584 aa15.06■□□□□ 0
ATPAF1-210ENST00000532925 MAPK8IP2Q13387 824 aaPredicted RBP13.89□□□□□ -0.19
ATPAF1-210ENST00000532925 DMRT2Q9Y5R5 561 aa13.77□□□□□ -0.21
ATPAF1-210ENST00000532925 SCAF1Q9H7N4 1312 aaKnown RBP13.72□□□□□ -0.21
ATPAF1-210ENST00000532925 PPP4R3CPQ6ZMV5 832 aa13.45□□□□□ -0.26
ATPAF1-210ENST00000532925 DCAF8L1A6NGE4 600 aa13.25□□□□□ -0.29
ATPAF1-210ENST00000532925 HOXD11P31277 338 aaPredicted RBP13.22□□□□□ -0.29
ATPAF1-210ENST00000532925 CNKSR2Q8WXI2 1034 aa13.19□□□□□ -0.3
ATPAF1-210ENST00000532925 CACNB1Q02641 598 aaPredicted RBP13.13□□□□□ -0.31
ATPAF1-210ENST00000532925 RNF216Q9NWF9 866 aaPredicted RBP13.1□□□□□ -0.31
ATPAF1-210ENST00000532925 RNF39Q9H2S5 420 aa12.98□□□□□ -0.33
ATPAF1-210ENST00000532925 NCBP3Q53F19 620 aaKnown RBP12.85□□□□□ -0.35
ATPAF1-210ENST00000532925 C1QBPQ07021 282 aaKnown RBP12.76□□□□□ -0.37
ATPAF1-210ENST00000532925 DNAJC5BQ9UF47 199 aa12.73□□□□□ -0.37
ATPAF1-210ENST00000532925 NPM3O75607 178 aaKnown RBP12.72□□□□□ -0.37
ATPAF1-210ENST00000532925 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.61□□□□□ -0.39
ATPAF1-210ENST00000532925 NISCHQ9Y2I1 1504 aa12.47□□□□□ -0.41
ATPAF1-210ENST00000532925 KCNA4P22459 653 aa12.41□□□□□ -0.42
ATPAF1-210ENST00000532925 U3KPZ7 1027 aaPredicted RBP12.36□□□□□ -0.43
ATPAF1-210ENST00000532925 SPINK5Q9NQ38 1064 aaPredicted RBP12.23□□□□□ -0.45
ATPAF1-210ENST00000532925 CAPN15O75808 1086 aa12.19□□□□□ -0.46
ATPAF1-210ENST00000532925 SLC4A2P04920 1241 aa12.18□□□□□ -0.46
ATPAF1-210ENST00000532925 DSG3P32926 999 aa12.13□□□□□ -0.47
ATPAF1-210ENST00000532925 TRHP20396 242 aaPredicted RBP11.98□□□□□ -0.49
ATPAF1-210ENST00000532925 ABCB7O75027 752 aa11.93□□□□□ -0.5
ATPAF1-210ENST00000532925 APLP2Q06481 763 aa11.93□□□□□ -0.5
ATPAF1-210ENST00000532925 ZNF219Q9P2Y4 722 aaPredicted RBP11.91□□□□□ -0.5
ATPAF1-210ENST00000532925 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.9□□□□□ -0.5
ATPAF1-210ENST00000532925 HNRNPUL2Q1KMD3 747 aaKnown RBP11.9□□□□□ -0.5
ATPAF1-210ENST00000532925 SAMD1Q6SPF0 538 aaPredicted RBP11.85□□□□□ -0.51
ATPAF1-210ENST00000532925 POTEHQ6S545 545 aa11.77□□□□□ -0.53
ATPAF1-210ENST00000532925 MYCNP04198 464 aaPredicted RBP11.75□□□□□ -0.53
ATPAF1-210ENST00000532925 SLC4A1APQ9BWU0 796 aaKnown RBP11.66□□□□□ -0.54
ATPAF1-210ENST00000532925 POLA2Q14181 598 aa11.62□□□□□ -0.55
ATPAF1-210ENST00000532925 FOXD4L1Q9NU39 408 aa11.58□□□□□ -0.56
ATPAF1-210ENST00000532925 RBM42Q9BTD8 480 aaKnown RBP11.54□□□□□ -0.56
ATPAF1-210ENST00000532925 ATF5Q9Y2D1 282 aaPredicted RBP11.54□□□□□ -0.56
ATPAF1-210ENST00000532925 ZBTB22O15209 634 aa11.42□□□□□ -0.58
ATPAF1-210ENST00000532925 CHRDL2Q6WN34 429 aa11.36□□□□□ -0.59
ATPAF1-210ENST00000532925 ZBTB12Q9Y330 459 aaPredicted RBP11.32□□□□□ -0.6
ATPAF1-210ENST00000532925 OSCARQ8IYS5 282 aa11.28□□□□□ -0.6
ATPAF1-210ENST00000532925 AKT1S1Q96B36 256 aa11.26□□□□□ -0.61
ATPAF1-210ENST00000532925 ATXN8OSP0DMR3 200 aa11.18□□□□□ -0.62
ATPAF1-210ENST00000532925 REM2Q8IYK8 340 aaPredicted RBP11.18□□□□□ -0.62
ATPAF1-210ENST00000532925 PITPNM1O00562 1244 aa11.08□□□□□ -0.64
ATPAF1-210ENST00000532925 PIP4P2Q8N4L2 257 aa11.08□□□□□ -0.64
ATPAF1-210ENST00000532925 FBLN2P98095 1184 aa11.03□□□□□ -0.64
ATPAF1-210ENST00000532925 SPDYE2BA6NHP3 402 aa10.99□□□□□ -0.65
ATPAF1-210ENST00000532925 SPDYE6P0CI01 402 aa10.99□□□□□ -0.65
ATPAF1-210ENST00000532925 MKRN4PQ13434 485 aaPredicted RBP10.99□□□□□ -0.65
ATPAF1-210ENST00000532925 SPDYE2Q495Y8 402 aa10.99□□□□□ -0.65
ATPAF1-210ENST00000532925 FXR2P51116 673 aaKnown RBP eCLIP10.98□□□□□ -0.65
ATPAF1-210ENST00000532925 SP7Q8TDD2 431 aaPredicted RBP10.98□□□□□ -0.65
ATPAF1-210ENST00000532925 HAX1O00165 279 aa10.9□□□□□ -0.66
ATPAF1-210ENST00000532925 CCDC180Q9P1Z9 1646 aa10.87□□□□□ -0.67
ATPAF1-210ENST00000532925 ZNF692Q9BU19 519 aaPredicted RBP10.86□□□□□ -0.67
ATPAF1-210ENST00000532925 CLEC11AQ9Y240 323 aa10.86□□□□□ -0.67
ATPAF1-210ENST00000532925 SSUH2Q9Y2M2 353 aa10.85□□□□□ -0.67
ATPAF1-210ENST00000532925 SPDYE1Q8NFV5 336 aaPredicted RBP10.82□□□□□ -0.68
ATPAF1-210ENST00000532925 PRKAR2AP13861 404 aaKnown RBP10.79□□□□□ -0.68
ATPAF1-210ENST00000532925 EVX2Q03828 476 aa10.79□□□□□ -0.68
ATPAF1-210ENST00000532925 CSRNP3Q8WYN3 585 aa10.78□□□□□ -0.68
ATPAF1-210ENST00000532925 PABPN1Q86U42 306 aaKnown RBP eCLIP10.71□□□□□ -0.69
ATPAF1-210ENST00000532925 CHADLQ6NUI6 762 aa10.68□□□□□ -0.7
ATPAF1-210ENST00000532925 C19orf67A6NJJ6 358 aa10.64□□□□□ -0.71
ATPAF1-210ENST00000532925 PRR29P0C7W0 189 aa10.63□□□□□ -0.71
ATPAF1-210ENST00000532925 EHMT2Q96KQ7 1210 aa10.62□□□□□ -0.71
ATPAF1-210ENST00000532925 ZCCHC6Q5VYS8 1495 aaKnown RBP10.56□□□□□ -0.72
ATPAF1-210ENST00000532925 GABBR2O75899 941 aa10.52□□□□□ -0.73
ATPAF1-210ENST00000532925 FARP1Q9Y4F1 1045 aaPredicted RBP10.47□□□□□ -0.73
ATPAF1-210ENST00000532925 CD44P16070 742 aaKnown RBP10.44□□□□□ -0.74
ATPAF1-210ENST00000532925 DCAF1Q9Y4B6 1507 aa10.43□□□□□ -0.74
ATPAF1-210ENST00000532925 SPDYE4A6NLX3 237 aa10.39□□□□□ -0.75
ATPAF1-210ENST00000532925 CREBZFQ9NS37 354 aa10.36□□□□□ -0.75
ATPAF1-210ENST00000532925 STAG3Q9UJ98 1225 aa10.34□□□□□ -0.75
ATPAF1-210ENST00000532925 POTEIP0CG38 1075 aa10.31□□□□□ -0.76
ATPAF1-210ENST00000532925 LHX8Q68G74 356 aa10.3□□□□□ -0.76
ATPAF1-210ENST00000532925 ZRANB1Q9UGI0 708 aa10.28□□□□□ -0.76
ATPAF1-210ENST00000532925 ZNF579Q8NAF0 562 aaKnown RBP10.26□□□□□ -0.77
ATPAF1-210ENST00000532925 MYO15BQ96JP2 1530 aa10.26□□□□□ -0.77
ATPAF1-210ENST00000532925 CLCN6P51797 869 aa10.23□□□□□ -0.77
ATPAF1-210ENST00000532925 DCBLD2Q96PD2 775 aa10.2□□□□□ -0.78
ATPAF1-210ENST00000532925 GALR2O43603 387 aaPredicted RBP10.18□□□□□ -0.78
ATPAF1-210ENST00000532925 MNX1P50219 401 aaPredicted RBP10.17□□□□□ -0.78
ATPAF1-210ENST00000532925 PHF12Q96QT6 1004 aa10.15□□□□□ -0.78
ATPAF1-210ENST00000532925 PAK3O75914 559 aaPredicted RBP10.14□□□□□ -0.79
ATPAF1-210ENST00000532925 NPM1P06748 294 aaKnown RBP eCLIP10.13□□□□□ -0.79
ATPAF1-210ENST00000532925 PROM2Q8N271 834 aa10.1□□□□□ -0.79
ATPAF1-210ENST00000532925 SHROOM4Q9ULL8 1493 aa10.1□□□□□ -0.79
ATPAF1-210ENST00000532925 NACADO15069 1562 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms