RNA–Protein interactions for RNA: ENST00000532280.1

PTENP1-202, Transcript of phosphatase and tensin homolog pseudogene 1, humanhuman

BASIC

Gene PTENP1, Length 3,996 nt, Biotype processed transcript, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTENP1-202ENST00000532280 IQGAP2Q13576 1575 aa18.71■□□□□ 0.59
PTENP1-202ENST00000532280 ROCK2O75116 1388 aaKnown RBP18.71■□□□□ 0.58
PTENP1-202ENST00000532280 HECW1Q76N89 1606 aa18.7■□□□□ 0.58
PTENP1-202ENST00000532280 WDR43Q15061 677 aaKnown RBP eCLIP18.7■□□□□ 0.58
PTENP1-202ENST00000532280 GOLGA6L3A6NEY3 463 aa18.7■□□□□ 0.58
PTENP1-202ENST00000532280 DNTTIP2Q5QJE6 756 aaKnown RBP18.7■□□□□ 0.58
PTENP1-202ENST00000532280 LAMC3Q9Y6N6 1575 aa18.7■□□□□ 0.58
PTENP1-202ENST00000532280 MIA2Q96PC5 1412 aa18.69■□□□□ 0.58
PTENP1-202ENST00000532280 PLB1Q6P1J6 1458 aa18.69■□□□□ 0.58
PTENP1-202ENST00000532280 NEUROD2Q15784 382 aa18.69■□□□□ 0.58
PTENP1-202ENST00000532280 NBPF1Q3BBV0 1214 aa18.68■□□□□ 0.58
PTENP1-202ENST00000532280 CDCA7LQ96GN5 454 aa18.66■□□□□ 0.58
PTENP1-202ENST00000532280 ANKRD50Q9ULJ7 1429 aa18.65■□□□□ 0.58
PTENP1-202ENST00000532280 DENND4BO75064 1496 aaPredicted RBP18.65■□□□□ 0.58
PTENP1-202ENST00000532280 RPRD2Q5VT52 1461 aaKnown RBP18.65■□□□□ 0.58
PTENP1-202ENST00000532280 CRBNQ96SW2 442 aa18.64■□□□□ 0.57
PTENP1-202ENST00000532280 PNISRQ8TF01 805 aaKnown RBP18.63■□□□□ 0.57
PTENP1-202ENST00000532280 CHGAP10645 457 aaKnown RBP18.63■□□□□ 0.57
PTENP1-202ENST00000532280 RRP1P56182 461 aaKnown RBP18.63■□□□□ 0.57
PTENP1-202ENST00000532280 SAMD9Q5K651 1589 aa18.63■□□□□ 0.57
PTENP1-202ENST00000532280 MYH16Q9H6N6 1097 aa18.63■□□□□ 0.57
PTENP1-202ENST00000532280 FAM13BQ9NYF5 915 aa18.61■□□□□ 0.57
PTENP1-202ENST00000532280 FOXD4L1Q9NU39 408 aa18.6■□□□□ 0.57
PTENP1-202ENST00000532280 PTMAP06454 111 aaKnown RBP18.6■□□□□ 0.57
PTENP1-202ENST00000532280 TNNT2P45379 298 aaPredicted RBP18.6■□□□□ 0.57
PTENP1-202ENST00000532280 ABCA5Q8WWZ7 1642 aa18.6■□□□□ 0.57
PTENP1-202ENST00000532280 KIF21AQ7Z4S6 1674 aa18.6■□□□□ 0.57
PTENP1-202ENST00000532280 CARMIL2Q6F5E8 1435 aa18.59■□□□□ 0.57
PTENP1-202ENST00000532280 KIAA1107Q9UPP5 1409 aa18.59■□□□□ 0.57
PTENP1-202ENST00000532280 LRRIQ1Q96JM4 1722 aa18.59■□□□□ 0.57
PTENP1-202ENST00000532280 PANK3Q9H999 370 aa18.59■□□□□ 0.57
PTENP1-202ENST00000532280 MSNP26038 577 aaKnown RBP18.58■□□□□ 0.57
PTENP1-202ENST00000532280 POGKQ9P215 609 aa18.58■□□□□ 0.57
PTENP1-202ENST00000532280 KIF15Q9NS87 1388 aa18.58■□□□□ 0.56
PTENP1-202ENST00000532280 TROQ12816 1431 aaPredicted RBP18.58■□□□□ 0.56
PTENP1-202ENST00000532280 KDM5BQ9UGL1 1544 aa18.58■□□□□ 0.56
PTENP1-202ENST00000532280 NUP153P49790 1475 aaKnown RBP18.58■□□□□ 0.56
PTENP1-202ENST00000532280 TCOF1Q13428 1488 aaKnown RBP18.58■□□□□ 0.56
PTENP1-202ENST00000532280 BACH2Q9BYV9 841 aa18.57■□□□□ 0.56
PTENP1-202ENST00000532280 MYBBP1AQ9BQG0 1328 aaKnown RBP18.57■□□□□ 0.56
PTENP1-202ENST00000532280 CAMSAP2Q08AD1 1489 aa18.57■□□□□ 0.56
PTENP1-202ENST00000532280 MRC2Q9UBG0 1479 aa18.56■□□□□ 0.56
PTENP1-202ENST00000532280 RBM10P98175 930 aaKnown RBP18.56■□□□□ 0.56
PTENP1-202ENST00000532280 KTN1Q86UP2 1357 aaKnown RBP18.56■□□□□ 0.56
PTENP1-202ENST00000532280 FAM43AQ8N2R8 423 aa18.56■□□□□ 0.56
PTENP1-202ENST00000532280 ROCK1Q13464 1354 aa18.56■□□□□ 0.56
PTENP1-202ENST00000532280 PLEKHG5O94827 1062 aa18.55■□□□□ 0.56
PTENP1-202ENST00000532280 PLCB2Q00722 1185 aa18.54■□□□□ 0.56
PTENP1-202ENST00000532280 NLRP13Q86W25 1043 aa18.54■□□□□ 0.56
PTENP1-202ENST00000532280 RALBP1Q15311 655 aa18.54■□□□□ 0.56
PTENP1-202ENST00000532280 WDR62O43379 1518 aa18.53■□□□□ 0.56
PTENP1-202ENST00000532280 KIAA0586Q9BVV6 1533 aa18.53■□□□□ 0.56
PTENP1-202ENST00000532280 KNSTRNQ9Y448 316 aa18.53■□□□□ 0.56
PTENP1-202ENST00000532280 CCDC146Q8IYE0 955 aa18.53■□□□□ 0.56
PTENP1-202ENST00000532280 ARHGEF11O15085 1522 aa18.52■□□□□ 0.56
PTENP1-202ENST00000532280 FAM161AQ3B820 660 aa18.51■□□□□ 0.55
PTENP1-202ENST00000532280 TEX14Q8IWB6 1497 aa18.51■□□□□ 0.55
PTENP1-202ENST00000532280 C9orf84Q5VXU9 1444 aa18.51■□□□□ 0.55
PTENP1-202ENST00000532280 TMF1P82094 1093 aa18.5■□□□□ 0.55
PTENP1-202ENST00000532280 DHX29Q7Z478 1369 aaKnown RBP18.5■□□□□ 0.55
PTENP1-202ENST00000532280 HSP90AB1P08238 724 aaKnown RBP18.49■□□□□ 0.55
PTENP1-202ENST00000532280 GPATCH8Q9UKJ3 1502 aaKnown RBP18.49■□□□□ 0.55
PTENP1-202ENST00000532280 CCDC144AA2RUR9 1427 aa18.49■□□□□ 0.55
PTENP1-202ENST00000532280 PZPP20742 1482 aa18.49■□□□□ 0.55
PTENP1-202ENST00000532280 SMG6Q86US8 1419 aaKnown RBP18.48■□□□□ 0.55
PTENP1-202ENST00000532280 MFAP1P55081 439 aaKnown RBP18.48■□□□□ 0.55
PTENP1-202ENST00000532280 CDK11BP21127 795 aaKnown RBP18.48■□□□□ 0.55
PTENP1-202ENST00000532280 GOLGA6L22H0YM25 854 aa18.47■□□□□ 0.55
PTENP1-202ENST00000532280 GRIN2AQ12879 1464 aa18.47■□□□□ 0.55
PTENP1-202ENST00000532280 DISP1Q96F81 1524 aa18.46■□□□□ 0.55
PTENP1-202ENST00000532280 MS4A1P11836 297 aa18.46■□□□□ 0.55
PTENP1-202ENST00000532280 PTPRGP23470 1445 aa18.46■□□□□ 0.55
PTENP1-202ENST00000532280 IFT140Q96RY7 1462 aa18.45■□□□□ 0.54
PTENP1-202ENST00000532280 ADAMTS12P58397 1594 aa18.45■□□□□ 0.54
PTENP1-202ENST00000532280 CLUAP1Q96AJ1 413 aa18.45■□□□□ 0.54
PTENP1-202ENST00000532280 SPATA31E1Q6ZUB1 1445 aa18.44■□□□□ 0.54
PTENP1-202ENST00000532280 TARBP1Q13395 1621 aaKnown RBP18.44■□□□□ 0.54
PTENP1-202ENST00000532280 HSCBQ8IWL3 235 aa18.43■□□□□ 0.54
PTENP1-202ENST00000532280 GCC2Q8IWJ2 1684 aa18.42■□□□□ 0.54
PTENP1-202ENST00000532280 ADAMTS8Q9UP79 889 aa18.42■□□□□ 0.54
PTENP1-202ENST00000532280 RAPGEF6Q8TEU7 1601 aa18.4■□□□□ 0.54
PTENP1-202ENST00000532280 C20orf194Q5TEA3 1177 aa18.4■□□□□ 0.54
PTENP1-202ENST00000532280 PBRM1Q86U86 1689 aa18.39■□□□□ 0.54
PTENP1-202ENST00000532280 KIAA0556O60303 1618 aa18.39■□□□□ 0.53
PTENP1-202ENST00000532280 MAPK8IP2Q13387 824 aaPredicted RBP18.38■□□□□ 0.53
PTENP1-202ENST00000532280 KIF14Q15058 1648 aa18.38■□□□□ 0.53
PTENP1-202ENST00000532280 BRD4O60885 1362 aaPredicted RBP18.38■□□□□ 0.53
PTENP1-202ENST00000532280 DNMT1P26358 1616 aaKnown RBP18.37■□□□□ 0.53
PTENP1-202ENST00000532280 AFAP1Q8N556 730 aa18.36■□□□□ 0.53
PTENP1-202ENST00000532280 R3HCC1Q9Y3T6 440 aaKnown RBP18.36■□□□□ 0.53
PTENP1-202ENST00000532280 NUTM2DQ5VT03 806 aaPredicted RBP18.36■□□□□ 0.53
PTENP1-202ENST00000532280 BCL2L13Q9BXK5 485 aa18.36■□□□□ 0.53
PTENP1-202ENST00000532280 PRDM10Q9NQV6 1147 aa18.36■□□□□ 0.53
PTENP1-202ENST00000532280 FTSJ3Q8IY81 847 aaKnown RBP18.35■□□□□ 0.53
PTENP1-202ENST00000532280 MAGI1Q96QZ7 1491 aaPredicted RBP18.34■□□□□ 0.53
PTENP1-202ENST00000532280 SAFB2Q14151 953 aaKnown RBP eCLIP18.34■□□□□ 0.53
PTENP1-202ENST00000532280 CENPQQ7L2Z9 268 aaPredicted RBP18.34■□□□□ 0.53
PTENP1-202ENST00000532280 PANK2Q9BZ23 570 aa18.34■□□□□ 0.53
PTENP1-202ENST00000532280 RRP7AQ9Y3A4 280 aaKnown RBP18.34■□□□□ 0.53
PTENP1-202ENST00000532280 DISP3Q9P2K9 1392 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms