RNA–Protein interactions for RNA: ENST00000531660.5

NR1H3-233, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-233ENST00000531660 KIF15Q9NS87 1388 aa25.99■■□□□ 1.75
NR1H3-233ENST00000531660 ANKRD30AQ9BXX3 1397 aa25.97■■□□□ 1.75
NR1H3-233ENST00000531660 RNF17Q9BXT8 1623 aaKnown RBP25.97■■□□□ 1.75
NR1H3-233ENST00000531660 UHRF1BP1Q6BDS2 1440 aa25.97■■□□□ 1.75
NR1H3-233ENST00000531660 KDM5DQ9BY66 1539 aa25.95■■□□□ 1.74
NR1H3-233ENST00000531660 ERBINQ96RT1 1412 aa25.95■■□□□ 1.74
NR1H3-233ENST00000531660 RRP7BPQ9NSQ0 103 aa25.94■■□□□ 1.74
NR1H3-233ENST00000531660 WASHC2CQ9Y4E1 1318 aa25.93■■□□□ 1.74
NR1H3-233ENST00000531660 ADGRL2O95490 1459 aa25.93■■□□□ 1.74
NR1H3-233ENST00000531660 NCOA1Q15788 1441 aa25.93■■□□□ 1.74
NR1H3-233ENST00000531660 CHIC2Q9UKJ5 165 aa25.92■■□□□ 1.74
NR1H3-233ENST00000531660 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.92■■□□□ 1.74
NR1H3-233ENST00000531660 PTPRKQ15262 1439 aa25.91■■□□□ 1.74
NR1H3-233ENST00000531660 PPARGC1BQ86YN6 1023 aaKnown RBP25.91■■□□□ 1.74
NR1H3-233ENST00000531660 HSPA2P54652 639 aa25.9■■□□□ 1.74
NR1H3-233ENST00000531660 ZC3H13Q5T200 1668 aaKnown RBP25.87■■□□□ 1.73
NR1H3-233ENST00000531660 MROH1Q8NDA8 1641 aa25.86■■□□□ 1.73
NR1H3-233ENST00000531660 PZPP20742 1482 aa25.85■■□□□ 1.73
NR1H3-233ENST00000531660 ABCC3O15438 1527 aa25.83■■□□□ 1.73
NR1H3-233ENST00000531660 PRDM15P57071 1507 aaPredicted RBP25.83■■□□□ 1.72
NR1H3-233ENST00000531660 DEPDC5O75140 1603 aa25.81■■□□□ 1.72
NR1H3-233ENST00000531660 ROCK1Q13464 1354 aa25.81■■□□□ 1.72
NR1H3-233ENST00000531660 RRBP1Q9P2E9 1410 aaKnown RBP25.8■■□□□ 1.72
NR1H3-233ENST00000531660 MYO3AQ8NEV4 1616 aa25.78■■□□□ 1.72
NR1H3-233ENST00000531660 KANK1Q14678 1352 aa25.78■■□□□ 1.72
NR1H3-233ENST00000531660 ZNF142P52746 1687 aaPredicted RBP25.77■■□□□ 1.72
NR1H3-233ENST00000531660 TNRQ92752 1358 aa25.77■■□□□ 1.72
NR1H3-233ENST00000531660 ANKRD50Q9ULJ7 1429 aa25.77■■□□□ 1.72
NR1H3-233ENST00000531660 FBXO31Q5XUX0 539 aaPredicted RBP25.76■■□□□ 1.71
NR1H3-233ENST00000531660 CEP152O94986 1710 aa25.75■■□□□ 1.71
NR1H3-233ENST00000531660 CEP170BQ9Y4F5 1589 aaPredicted RBP25.74■■□□□ 1.71
NR1H3-233ENST00000531660 DMRT2Q9Y5R5 561 aa25.74■■□□□ 1.71
NR1H3-233ENST00000531660 CAMSAP1Q5T5Y3 1602 aa25.74■■□□□ 1.71
NR1H3-233ENST00000531660 ARHGAP31Q2M1Z3 1444 aa25.73■■□□□ 1.71
NR1H3-233ENST00000531660 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.73■■□□□ 1.711e-6■■□□□ 11.6
NR1H3-233ENST00000531660 A2ML1A8K2U0 1454 aa25.72■■□□□ 1.71
NR1H3-233ENST00000531660 STRCQ7RTU9 1775 aa25.72■■□□□ 1.71
NR1H3-233ENST00000531660 VWDEQ8N2E2 1590 aa25.71■■□□□ 1.71
NR1H3-233ENST00000531660 SPATA31D1Q6ZQQ2 1576 aa25.7■■□□□ 1.71
NR1H3-233ENST00000531660 LMTK2Q8IWU2 1503 aa25.7■■□□□ 1.7
NR1H3-233ENST00000531660 NLRP1Q9C000 1473 aa25.7■■□□□ 1.7
NR1H3-233ENST00000531660 ITGAEP38570 1179 aa25.69■■□□□ 1.7
NR1H3-233ENST00000531660 ERVK-7P63135 1459 aa25.68■■□□□ 1.7
NR1H3-233ENST00000531660 PLA2R1Q13018 1463 aa25.67■■□□□ 1.7
NR1H3-233ENST00000531660 CFAP65Q6ZU64 1925 aaKnown RBP25.65■■□□□ 1.7
NR1H3-233ENST00000531660 PTPRTO14522 1441 aa25.64■■□□□ 1.7
NR1H3-233ENST00000531660 PKD2Q13563 968 aa25.62■■□□□ 1.69
NR1H3-233ENST00000531660 UNC13BO14795 1591 aa25.61■■□□□ 1.69
NR1H3-233ENST00000531660 THEMISQ8N1K5 641 aaPredicted RBP25.6■■□□□ 1.69
NR1H3-233ENST00000531660 EFCAB6Q5THR3 1501 aa25.59■■□□□ 1.69
NR1H3-233ENST00000531660 UGGT1Q9NYU2 1555 aa25.58■■□□□ 1.69
NR1H3-233ENST00000531660 RPRD2Q5VT52 1461 aaKnown RBP25.56■■□□□ 1.68
NR1H3-233ENST00000531660 TET3O43151 1660 aa25.55■■□□□ 1.68
NR1H3-233ENST00000531660 NCKAP5LQ9HCH0 1330 aa25.54■■□□□ 1.68
NR1H3-233ENST00000531660 NOS1P29475 1434 aa25.52■■□□□ 1.68
NR1H3-233ENST00000531660 IQGAP3Q86VI3 1631 aa25.52■■□□□ 1.68
NR1H3-233ENST00000531660 GCC2Q8IWJ2 1684 aa25.52■■□□□ 1.68
NR1H3-233ENST00000531660 NUP155O75694 1391 aa25.5■■□□□ 1.67
NR1H3-233ENST00000531660 NAIPQ13075 1403 aa25.5■■□□□ 1.67
NR1H3-233ENST00000531660 ANKLE2Q86XL3 938 aa25.5■■□□□ 1.67
NR1H3-233ENST00000531660 POLR1AO95602 1720 aaPredicted RBP25.49■■□□□ 1.67
NR1H3-233ENST00000531660 HFM1A2PYH4 1435 aa25.48■■□□□ 1.67
NR1H3-233ENST00000531660 UBR1Q8IWV7 1749 aa25.48■■□□□ 1.67
NR1H3-233ENST00000531660 SLC52A1Q9NWF4 448 aa25.46■■□□□ 1.67
NR1H3-233ENST00000531660 SYNMO15061 1565 aa25.46■■□□□ 1.67
NR1H3-233ENST00000531660 KDM5AP29375 1690 aaKnown RBP25.45■■□□□ 1.66
NR1H3-233ENST00000531660 IDI1Q13907 227 aa25.43■■□□□ 1.66
NR1H3-233ENST00000531660 PIK3C2BO00750 1634 aa25.43■■□□□ 1.66
NR1H3-233ENST00000531660 MED14O60244 1454 aa25.42■■□□□ 1.66
NR1H3-233ENST00000531660 CERKQ8TCT0 537 aa25.42■■□□□ 1.66
NR1H3-233ENST00000531660 NEURL4Q96JN8 1562 aa25.42■■□□□ 1.66
NR1H3-233ENST00000531660 E9PCH4 1651 aa25.42■■□□□ 1.66
NR1H3-233ENST00000531660 STAG3Q9UJ98 1225 aa25.41■■□□□ 1.66
NR1H3-233ENST00000531660 SLIT1O75093 1534 aa25.4■■□□□ 1.66
NR1H3-233ENST00000531660 ARHGAP23Q9P227 1491 aa25.4■■□□□ 1.66
NR1H3-233ENST00000531660 FBXO41Q8TF61 875 aa25.38■■□□□ 1.65
NR1H3-233ENST00000531660 NPHP4O75161 1426 aaPredicted RBP25.37■■□□□ 1.65
NR1H3-233ENST00000531660 LTBP4Q8N2S1 1624 aa25.37■■□□□ 1.65
NR1H3-233ENST00000531660 ILDR1Q86SU0 546 aaPredicted RBP25.36■■□□□ 1.65
NR1H3-233ENST00000531660 SCAF11Q99590 1463 aaKnown RBP25.35■■□□□ 1.65
NR1H3-233ENST00000531660 TMEM2Q9UHN6 1383 aa25.35■■□□□ 1.65
NR1H3-233ENST00000531660 EID1Q9Y6B2 187 aa25.35■■□□□ 1.65
NR1H3-233ENST00000531660 ADGRB3O60242 1522 aa25.35■■□□□ 1.65
NR1H3-233ENST00000531660 TXNDC2Q86VQ3 553 aa25.33■■□□□ 1.65
NR1H3-233ENST00000531660 IQGAP1P46940 1657 aa25.32■■□□□ 1.64
NR1H3-233ENST00000531660 ZNF335Q9H4Z2 1342 aaPredicted RBP25.32■■□□□ 1.64
NR1H3-233ENST00000531660 LTKP29376 864 aa25.3■■□□□ 1.64
NR1H3-233ENST00000531660 ACIN1Q9UKV3 1341 aaKnown RBP25.3■■□□□ 1.64
NR1H3-233ENST00000531660 IQSEC2Q5JU85 1478 aa25.29■■□□□ 1.64
NR1H3-233ENST00000531660 TRIM52Q96A61 297 aa25.29■■□□□ 1.64
NR1H3-233ENST00000531660 TMEM131LA2VDJ0 1609 aa25.26■■□□□ 1.63
NR1H3-233ENST00000531660 SPHKAPQ2M3C7 1700 aa25.26■■□□□ 1.63
NR1H3-233ENST00000531660 HDGFP51858 240 aaKnown RBP25.25■■□□□ 1.63
NR1H3-233ENST00000531660 MYO5BQ9ULV0 1848 aa25.23■■□□□ 1.63
NR1H3-233ENST00000531660 CPS1P31327 1500 aa25.22■■□□□ 1.63
NR1H3-233ENST00000531660 SLC4A1APQ9BWU0 796 aaKnown RBP25.22■■□□□ 1.63
NR1H3-233ENST00000531660 ZFYVE9O95405 1425 aa25.2■■□□□ 1.63
NR1H3-233ENST00000531660 SETD5Q9C0A6 1442 aa25.2■■□□□ 1.63
NR1H3-233ENST00000531660 CHGAP10645 457 aaKnown RBP25.2■■□□□ 1.62
NR1H3-233ENST00000531660 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms