RNA–Protein interactions for RNA: ENST00000529764.1

LTBP3-215, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 5

Gene LTBP3, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-215ENST00000529764 MAST1Q9Y2H9 1570 aa10.18□□□□□ -0.78
LTBP3-215ENST00000529764 FGD6Q6ZV73 1430 aa10.16□□□□□ -0.78
LTBP3-215ENST00000529764 KDM5DQ9BY66 1539 aa10.15□□□□□ -0.78
LTBP3-215ENST00000529764 EIF2AK4Q9P2K8 1649 aaKnown RBP10.15□□□□□ -0.79
LTBP3-215ENST00000529764 DUOX2Q9NRD8 1548 aa10.14□□□□□ -0.79
LTBP3-215ENST00000529764 FAM50AQ14320 339 aaKnown RBP10.14□□□□□ -0.79
LTBP3-215ENST00000529764 SHANK2Q9UPX8 1470 aa10.14□□□□□ -0.79
LTBP3-215ENST00000529764 KANK1Q14678 1352 aa10.14□□□□□ -0.79
LTBP3-215ENST00000529764 ANKRD30AQ9BXX3 1397 aa10.14□□□□□ -0.79
LTBP3-215ENST00000529764 CROCC2H7BZ55 1655 aa10.12□□□□□ -0.79
LTBP3-215ENST00000529764 ZC3H13Q5T200 1668 aaKnown RBP10.12□□□□□ -0.79
LTBP3-215ENST00000529764 DNMT1P26358 1616 aaKnown RBP10.12□□□□□ -0.79
LTBP3-215ENST00000529764 DAPK1P53355 1430 aa10.12□□□□□ -0.79
LTBP3-215ENST00000529764 KIF15Q9NS87 1388 aa10.12□□□□□ -0.79
LTBP3-215ENST00000529764 TCOF1Q13428 1488 aaKnown RBP10.11□□□□□ -0.79
LTBP3-215ENST00000529764 ERBINQ96RT1 1412 aa10.11□□□□□ -0.79
LTBP3-215ENST00000529764 RRP7BPQ9NSQ0 103 aa10.11□□□□□ -0.79
LTBP3-215ENST00000529764 PTPRKQ15262 1439 aa10.1□□□□□ -0.79
LTBP3-215ENST00000529764 PKD2Q13563 968 aa10.1□□□□□ -0.79
LTBP3-215ENST00000529764 FBXO41Q8TF61 875 aa10.1□□□□□ -0.79
LTBP3-215ENST00000529764 MYO3AQ8NEV4 1616 aa10.1□□□□□ -0.79
LTBP3-215ENST00000529764 TNRQ92752 1358 aa10.1□□□□□ -0.79
LTBP3-215ENST00000529764 RNF17Q9BXT8 1623 aaKnown RBP10.1□□□□□ -0.79
LTBP3-215ENST00000529764 PZPP20742 1482 aa10.1□□□□□ -0.79
LTBP3-215ENST00000529764 ZNF142P52746 1687 aaPredicted RBP10.09□□□□□ -0.79
LTBP3-215ENST00000529764 ABCC5O15440 1437 aa10.09□□□□□ -0.79
LTBP3-215ENST00000529764 CHIC2Q9UKJ5 165 aa10.09□□□□□ -0.79
LTBP3-215ENST00000529764 CEP170BQ9Y4F5 1589 aaPredicted RBP10.09□□□□□ -0.79
LTBP3-215ENST00000529764 PTPRTO14522 1441 aa10.08□□□□□ -0.8
LTBP3-215ENST00000529764 CAMSAP1Q5T5Y3 1602 aa10.08□□□□□ -0.8
LTBP3-215ENST00000529764 ILDR1Q86SU0 546 aaPredicted RBP10.08□□□□□ -0.8
LTBP3-215ENST00000529764 THEMISQ8N1K5 641 aaPredicted RBP10.08□□□□□ -0.8
LTBP3-215ENST00000529764 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.08□□□□□ -0.8
LTBP3-215ENST00000529764 A2ML1A8K2U0 1454 aa10.07□□□□□ -0.8
LTBP3-215ENST00000529764 PLA2R1Q13018 1463 aa10.07□□□□□ -0.8
LTBP3-215ENST00000529764 NLRP1Q9C000 1473 aa10.07□□□□□ -0.8
LTBP3-215ENST00000529764 NCOA1Q15788 1441 aa10.07□□□□□ -0.8
LTBP3-215ENST00000529764 STRCQ7RTU9 1775 aa10.06□□□□□ -0.8
LTBP3-215ENST00000529764 CERKQ8TCT0 537 aa10.06□□□□□ -0.8
LTBP3-215ENST00000529764 ANKLE2Q86XL3 938 aa10.05□□□□□ -0.8
LTBP3-215ENST00000529764 STAG3Q9UJ98 1225 aa10.05□□□□□ -0.8
LTBP3-215ENST00000529764 ABCC3O15438 1527 aa10.05□□□□□ -0.8
LTBP3-215ENST00000529764 CEP152O94986 1710 aa10.04□□□□□ -0.8
LTBP3-215ENST00000529764 PRDM15P57071 1507 aaPredicted RBP10.04□□□□□ -0.8
LTBP3-215ENST00000529764 FBXO31Q5XUX0 539 aaPredicted RBP10.04□□□□□ -0.8
LTBP3-215ENST00000529764 UGGT1Q9NYU2 1555 aa10.04□□□□□ -0.8
LTBP3-215ENST00000529764 ADGRL2O95490 1459 aa10.04□□□□□ -0.8
LTBP3-215ENST00000529764 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.02□□□□□ -0.8
LTBP3-215ENST00000529764 CFAP65Q6ZU64 1925 aaKnown RBP10.02□□□□□ -0.81
LTBP3-215ENST00000529764 ANKRD50Q9ULJ7 1429 aa10.02□□□□□ -0.81
LTBP3-215ENST00000529764 SCAF1Q9H7N4 1312 aaKnown RBP10.02□□□□□ -0.81
LTBP3-215ENST00000529764 NCKAP5LQ9HCH0 1330 aa10.02□□□□□ -0.81
LTBP3-215ENST00000529764 POLR1AO95602 1720 aaPredicted RBP10.02□□□□□ -0.81
LTBP3-215ENST00000529764 SPATA31D1Q6ZQQ2 1576 aa10.01□□□□□ -0.81
LTBP3-215ENST00000529764 ARHGAP31Q2M1Z3 1444 aa10.01□□□□□ -0.81
LTBP3-215ENST00000529764 DEPDC5O75140 1603 aa10.01□□□□□ -0.81
LTBP3-215ENST00000529764 ITGAEP38570 1179 aa10.01□□□□□ -0.81
LTBP3-215ENST00000529764 EID1Q9Y6B2 187 aa10.01□□□□□ -0.81
LTBP3-215ENST00000529764 ERVK-7P63135 1459 aa10.01□□□□□ -0.81
LTBP3-215ENST00000529764 ROCK1Q13464 1354 aa10.01□□□□□ -0.81
LTBP3-215ENST00000529764 PPARGC1BQ86YN6 1023 aaKnown RBP10□□□□□ -0.81
LTBP3-215ENST00000529764 MROH1Q8NDA8 1641 aa10□□□□□ -0.81
LTBP3-215ENST00000529764 HDGFP51858 240 aaKnown RBP9.99□□□□□ -0.81
LTBP3-215ENST00000529764 IQSEC2Q5JU85 1478 aa9.98□□□□□ -0.81
LTBP3-215ENST00000529764 LMTK2Q8IWU2 1503 aa9.98□□□□□ -0.81
LTBP3-215ENST00000529764 RPRD2Q5VT52 1461 aaKnown RBP9.98□□□□□ -0.81
LTBP3-215ENST00000529764 SLC52A1Q9NWF4 448 aa9.97□□□□□ -0.81
LTBP3-215ENST00000529764 NPHP4O75161 1426 aaPredicted RBP9.96□□□□□ -0.82
LTBP3-215ENST00000529764 TXNDC2Q86VQ3 553 aa9.95□□□□□ -0.82
LTBP3-215ENST00000529764 EFCAB6Q5THR3 1501 aa9.95□□□□□ -0.82
LTBP3-215ENST00000529764 TET3O43151 1660 aa9.95□□□□□ -0.82
LTBP3-215ENST00000529764 UBR1Q8IWV7 1749 aa9.94□□□□□ -0.82
LTBP3-215ENST00000529764 KDM5AP29375 1690 aaKnown RBP9.94□□□□□ -0.82
LTBP3-215ENST00000529764 IQGAP1P46940 1657 aa9.94□□□□□ -0.82
LTBP3-215ENST00000529764 GCC2Q8IWJ2 1684 aa9.94□□□□□ -0.82
LTBP3-215ENST00000529764 VWDEQ8N2E2 1590 aa9.94□□□□□ -0.82
LTBP3-215ENST00000529764 CPS1P31327 1500 aa9.94□□□□□ -0.82
LTBP3-215ENST00000529764 ZNF335Q9H4Z2 1342 aaPredicted RBP9.94□□□□□ -0.82
LTBP3-215ENST00000529764 MAPK8IP2Q13387 824 aaPredicted RBP9.94□□□□□ -0.82
LTBP3-215ENST00000529764 UNC13BO14795 1591 aa9.93□□□□□ -0.82
LTBP3-215ENST00000529764 MED14O60244 1454 aa9.93□□□□□ -0.82
LTBP3-215ENST00000529764 SCAF11Q99590 1463 aaKnown RBP9.93□□□□□ -0.82
LTBP3-215ENST00000529764 RRBP1Q9P2E9 1410 aaKnown RBP9.93□□□□□ -0.82
LTBP3-215ENST00000529764 NUP155O75694 1391 aa9.93□□□□□ -0.82
LTBP3-215ENST00000529764 BCANQ96GW7 911 aa9.93□□□□□ -0.82
LTBP3-215ENST00000529764 PIK3C2BO00750 1634 aa9.93□□□□□ -0.82
LTBP3-215ENST00000529764 LTBP4Q8N2S1 1624 aa9.93□□□□□ -0.82
LTBP3-215ENST00000529764 ACIN1Q9UKV3 1341 aaKnown RBP9.92□□□□□ -0.82
LTBP3-215ENST00000529764 TOM1O60784 492 aa9.92□□□□□ -0.82
LTBP3-215ENST00000529764 SLIT1O75093 1534 aa9.92□□□□□ -0.82
LTBP3-215ENST00000529764 UBAP1LF5GYI3 381 aa9.91□□□□□ -0.82
LTBP3-215ENST00000529764 PPP1R15AO75807 674 aaPredicted RBP9.91□□□□□ -0.82
LTBP3-215ENST00000529764 CHGAP10645 457 aaKnown RBP9.91□□□□□ -0.82
LTBP3-215ENST00000529764 IDI1Q13907 227 aa9.91□□□□□ -0.82
LTBP3-215ENST00000529764 IQGAP3Q86VI3 1631 aa9.91□□□□□ -0.82
LTBP3-215ENST00000529764 NEURL4Q96JN8 1562 aa9.91□□□□□ -0.82
LTBP3-215ENST00000529764 NOS1P29475 1434 aa9.9□□□□□ -0.82
LTBP3-215ENST00000529764 TMEM2Q9UHN6 1383 aa9.9□□□□□ -0.82
LTBP3-215ENST00000529764 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.9□□□□□ -0.82
LTBP3-215ENST00000529764 ADGRB3O60242 1522 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms