RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 HSPA2P54652 639 aa18.73■□□□□ 0.59
TRAPPC4-209ENST00000528230 EIF2AK4Q9P2K8 1649 aaKnown RBP18.73■□□□□ 0.59
TRAPPC4-209ENST00000528230 DUOX2Q9NRD8 1548 aa18.72■□□□□ 0.59
TRAPPC4-209ENST00000528230 RNF17Q9BXT8 1623 aaKnown RBP18.71■□□□□ 0.58
TRAPPC4-209ENST00000528230 PTPRKQ15262 1439 aa18.69■□□□□ 0.58
TRAPPC4-209ENST00000528230 WASHC2CQ9Y4E1 1318 aa18.69■□□□□ 0.58
TRAPPC4-209ENST00000528230 KDM5DQ9BY66 1539 aa18.69■□□□□ 0.58
TRAPPC4-209ENST00000528230 KIF15Q9NS87 1388 aa18.68■□□□□ 0.58
TRAPPC4-209ENST00000528230 ANKRD30AQ9BXX3 1397 aa18.68■□□□□ 0.58
TRAPPC4-209ENST00000528230 FAM50AQ14320 339 aaKnown RBP18.67■□□□□ 0.58
TRAPPC4-209ENST00000528230 RRP7BPQ9NSQ0 103 aa18.67■□□□□ 0.58
TRAPPC4-209ENST00000528230 ERBINQ96RT1 1412 aa18.66■□□□□ 0.58
TRAPPC4-209ENST00000528230 NCOA1Q15788 1441 aa18.65■□□□□ 0.58
TRAPPC4-209ENST00000528230 ZC3H13Q5T200 1668 aaKnown RBP18.64■□□□□ 0.57
TRAPPC4-209ENST00000528230 CHIC2Q9UKJ5 165 aa18.64■□□□□ 0.57
TRAPPC4-209ENST00000528230 ADGRL2O95490 1459 aa18.64■□□□□ 0.57
TRAPPC4-209ENST00000528230 PZPP20742 1482 aa18.63■□□□□ 0.57
TRAPPC4-209ENST00000528230 MROH1Q8NDA8 1641 aa18.62■□□□□ 0.57
TRAPPC4-209ENST00000528230 STRCQ7RTU9 1775 aa18.62■□□□□ 0.57
TRAPPC4-209ENST00000528230 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.61■□□□□ 0.573e-6■■■■□ 26.4
TRAPPC4-209ENST00000528230 DMRT2Q9Y5R5 561 aa18.61■□□□□ 0.57
TRAPPC4-209ENST00000528230 ZNF142P52746 1687 aaPredicted RBP18.6■□□□□ 0.57
TRAPPC4-209ENST00000528230 MYO3AQ8NEV4 1616 aa18.6■□□□□ 0.57
TRAPPC4-209ENST00000528230 ABCC3O15438 1527 aa18.6■□□□□ 0.57
TRAPPC4-209ENST00000528230 PPARGC1BQ86YN6 1023 aaKnown RBP18.6■□□□□ 0.57
TRAPPC4-209ENST00000528230 DEPDC5O75140 1603 aa18.59■□□□□ 0.57
TRAPPC4-209ENST00000528230 FBXO31Q5XUX0 539 aaPredicted RBP18.58■□□□□ 0.56
TRAPPC4-209ENST00000528230 PRDM15P57071 1507 aaPredicted RBP18.58■□□□□ 0.56
TRAPPC4-209ENST00000528230 CEP170BQ9Y4F5 1589 aaPredicted RBP18.57■□□□□ 0.56
TRAPPC4-209ENST00000528230 CEP152O94986 1710 aa18.57■□□□□ 0.56
TRAPPC4-209ENST00000528230 TNRQ92752 1358 aa18.56■□□□□ 0.56
TRAPPC4-209ENST00000528230 A2ML1A8K2U0 1454 aa18.55■□□□□ 0.56
TRAPPC4-209ENST00000528230 CAMSAP1Q5T5Y3 1602 aa18.55■□□□□ 0.56
TRAPPC4-209ENST00000528230 ROCK1Q13464 1354 aa18.55■□□□□ 0.56
TRAPPC4-209ENST00000528230 KANK1Q14678 1352 aa18.55■□□□□ 0.56
TRAPPC4-209ENST00000528230 CFAP65Q6ZU64 1925 aaKnown RBP18.53■□□□□ 0.56
TRAPPC4-209ENST00000528230 PTPRTO14522 1441 aa18.53■□□□□ 0.56
TRAPPC4-209ENST00000528230 ARHGAP31Q2M1Z3 1444 aa18.53■□□□□ 0.56
TRAPPC4-209ENST00000528230 ANKRD50Q9ULJ7 1429 aa18.53■□□□□ 0.56
TRAPPC4-209ENST00000528230 PLA2R1Q13018 1463 aa18.52■□□□□ 0.56
TRAPPC4-209ENST00000528230 SPATA31D1Q6ZQQ2 1576 aa18.52■□□□□ 0.56
TRAPPC4-209ENST00000528230 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.52■□□□□ 0.56
TRAPPC4-209ENST00000528230 NLRP1Q9C000 1473 aa18.52■□□□□ 0.55
TRAPPC4-209ENST00000528230 VWDEQ8N2E2 1590 aa18.51■□□□□ 0.55
TRAPPC4-209ENST00000528230 RRBP1Q9P2E9 1410 aaKnown RBP18.5■□□□□ 0.55
TRAPPC4-209ENST00000528230 LMTK2Q8IWU2 1503 aa18.5■□□□□ 0.55
TRAPPC4-209ENST00000528230 PKD2Q13563 968 aa18.5■□□□□ 0.55
TRAPPC4-209ENST00000528230 ERVK-7P63135 1459 aa18.49■□□□□ 0.55
TRAPPC4-209ENST00000528230 THEMISQ8N1K5 641 aaPredicted RBP18.47■□□□□ 0.55
TRAPPC4-209ENST00000528230 NCKAP5LQ9HCH0 1330 aa18.46■□□□□ 0.55
TRAPPC4-209ENST00000528230 ITGAEP38570 1179 aa18.45■□□□□ 0.54
TRAPPC4-209ENST00000528230 UGGT1Q9NYU2 1555 aa18.45■□□□□ 0.54
TRAPPC4-209ENST00000528230 ILDR1Q86SU0 546 aaPredicted RBP18.43■□□□□ 0.54
TRAPPC4-209ENST00000528230 UNC13BO14795 1591 aa18.42■□□□□ 0.54
TRAPPC4-209ENST00000528230 POLR1AO95602 1720 aaPredicted RBP18.41■□□□□ 0.54
TRAPPC4-209ENST00000528230 EFCAB6Q5THR3 1501 aa18.41■□□□□ 0.54
TRAPPC4-209ENST00000528230 CERKQ8TCT0 537 aa18.41■□□□□ 0.54
TRAPPC4-209ENST00000528230 ANKLE2Q86XL3 938 aa18.4■□□□□ 0.54
TRAPPC4-209ENST00000528230 FBXO41Q8TF61 875 aa18.4■□□□□ 0.54
TRAPPC4-209ENST00000528230 RPRD2Q5VT52 1461 aaKnown RBP18.39■□□□□ 0.54
TRAPPC4-209ENST00000528230 TET3O43151 1660 aa18.39■□□□□ 0.53
TRAPPC4-209ENST00000528230 GCC2Q8IWJ2 1684 aa18.38■□□□□ 0.53
TRAPPC4-209ENST00000528230 UBR1Q8IWV7 1749 aa18.38■□□□□ 0.53
TRAPPC4-209ENST00000528230 NOS1P29475 1434 aa18.37■□□□□ 0.53
TRAPPC4-209ENST00000528230 KDM5AP29375 1690 aaKnown RBP18.36■□□□□ 0.53
TRAPPC4-209ENST00000528230 IQGAP3Q86VI3 1631 aa18.36■□□□□ 0.53
TRAPPC4-209ENST00000528230 NEURL4Q96JN8 1562 aa18.35■□□□□ 0.53
TRAPPC4-209ENST00000528230 MED14O60244 1454 aa18.35■□□□□ 0.53
TRAPPC4-209ENST00000528230 SLC52A1Q9NWF4 448 aa18.35■□□□□ 0.53
TRAPPC4-209ENST00000528230 LTBP4Q8N2S1 1624 aa18.34■□□□□ 0.53
TRAPPC4-209ENST00000528230 IDI1Q13907 227 aa18.34■□□□□ 0.53
TRAPPC4-209ENST00000528230 PIK3C2BO00750 1634 aa18.34■□□□□ 0.53
TRAPPC4-209ENST00000528230 SYNMO15061 1565 aa18.34■□□□□ 0.53
TRAPPC4-209ENST00000528230 NUP155O75694 1391 aa18.33■□□□□ 0.53
TRAPPC4-209ENST00000528230 SLIT1O75093 1534 aa18.32■□□□□ 0.52
TRAPPC4-209ENST00000528230 NAIPQ13075 1403 aa18.32■□□□□ 0.52
TRAPPC4-209ENST00000528230 ARHGAP23Q9P227 1491 aa18.31■□□□□ 0.52
TRAPPC4-209ENST00000528230 E9PCH4 1651 aa18.31■□□□□ 0.52
TRAPPC4-209ENST00000528230 NPHP4O75161 1426 aaPredicted RBP18.31■□□□□ 0.52
TRAPPC4-209ENST00000528230 STAG3Q9UJ98 1225 aa18.3■□□□□ 0.52
TRAPPC4-209ENST00000528230 IQSEC2Q5JU85 1478 aa18.29■□□□□ 0.52
TRAPPC4-209ENST00000528230 IQGAP1P46940 1657 aa18.28■□□□□ 0.52
TRAPPC4-209ENST00000528230 ZNF335Q9H4Z2 1342 aaPredicted RBP18.28■□□□□ 0.52
TRAPPC4-209ENST00000528230 HFM1A2PYH4 1435 aa18.28■□□□□ 0.52
TRAPPC4-209ENST00000528230 TXNDC2Q86VQ3 553 aa18.27■□□□□ 0.52
TRAPPC4-209ENST00000528230 EID1Q9Y6B2 187 aa18.27■□□□□ 0.52
TRAPPC4-209ENST00000528230 TMEM2Q9UHN6 1383 aa18.27■□□□□ 0.51
TRAPPC4-209ENST00000528230 SCAF11Q99590 1463 aaKnown RBP18.26■□□□□ 0.51
TRAPPC4-209ENST00000528230 LTKP29376 864 aa18.26■□□□□ 0.51
TRAPPC4-209ENST00000528230 ADGRB3O60242 1522 aa18.25■□□□□ 0.51
TRAPPC4-209ENST00000528230 CPS1P31327 1500 aa18.22■□□□□ 0.51
TRAPPC4-209ENST00000528230 MYO5BQ9ULV0 1848 aa18.21■□□□□ 0.51
TRAPPC4-209ENST00000528230 TMEM131LA2VDJ0 1609 aa18.21■□□□□ 0.51
TRAPPC4-209ENST00000528230 HDGFP51858 240 aaKnown RBP18.2■□□□□ 0.5
TRAPPC4-209ENST00000528230 SPHKAPQ2M3C7 1700 aa18.19■□□□□ 0.5
TRAPPC4-209ENST00000528230 TRIM52Q96A61 297 aa18.17■□□□□ 0.5
TRAPPC4-209ENST00000528230 ACIN1Q9UKV3 1341 aaKnown RBP18.17■□□□□ 0.5
TRAPPC4-209ENST00000528230 FOXD1Q16676 465 aa18.16■□□□□ 0.5
TRAPPC4-209ENST00000528230 ZFYVE9O95405 1425 aa18.15■□□□□ 0.5
TRAPPC4-209ENST00000528230 STRCP1A6NGW2 1772 aa18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms