RNA–Protein interactions for RNA: ENST00000527011.5

VAV3-210, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best) BASIC

Gene VAV3, Length 4,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-210ENST00000527011 PANK1Q8TE04 598 aa20.83■□□□□ 0.93
VAV3-210ENST00000527011 ESPNB1AK53 854 aa20.83■□□□□ 0.92
VAV3-210ENST00000527011 U2SURPO15042 1029 aaKnown RBP20.83■□□□□ 0.92
VAV3-210ENST00000527011 ATAD2BQ9ULI0 1458 aa20.82■□□□□ 0.92
VAV3-210ENST00000527011 ERICH3Q5RHP9 1530 aa20.81■□□□□ 0.92
VAV3-210ENST00000527011 R3HCC1Q9Y3T6 440 aaKnown RBP20.81■□□□□ 0.92
VAV3-210ENST00000527011 PTMSP20962 102 aa20.8■□□□□ 0.92
VAV3-210ENST00000527011 EIF4G1Q04637 1599 aaKnown RBP20.8■□□□□ 0.92
VAV3-210ENST00000527011 HFM1A2PYH4 1435 aa20.8■□□□□ 0.92
VAV3-210ENST00000527011 C22orf23Q9BZE7 217 aa20.78■□□□□ 0.92
VAV3-210ENST00000527011 MYOM3Q5VTT5 1437 aa20.78■□□□□ 0.92
VAV3-210ENST00000527011 KIAA2012Q0VF49 1180 aa20.77■□□□□ 0.92
VAV3-210ENST00000527011 MORC1Q86VD1 984 aa20.77■□□□□ 0.92
VAV3-210ENST00000527011 MCM4P33991 863 aa20.77■□□□□ 0.92
VAV3-210ENST00000527011 ZNF644Q9H582 1327 aaPredicted RBP20.76■□□□□ 0.91
VAV3-210ENST00000527011 CHAF1AQ13111 956 aaPredicted RBP20.76■□□□□ 0.91
VAV3-210ENST00000527011 TIAM1Q13009 1591 aa20.76■□□□□ 0.91
VAV3-210ENST00000527011 E9PSI1 815 aa20.76■□□□□ 0.91
VAV3-210ENST00000527011 BCAR3O75815 825 aa20.76■□□□□ 0.91
VAV3-210ENST00000527011 CASC1Q6TDU7 716 aa20.76■□□□□ 0.91
VAV3-210ENST00000527011 SKOR2Q2VWA4 1001 aaPredicted RBP20.76■□□□□ 0.91
VAV3-210ENST00000527011 FOXD4L5Q5VV16 416 aaPredicted RBP20.76■□□□□ 0.91
VAV3-210ENST00000527011 FOXD4L4Q8WXT5 416 aaPredicted RBP20.76■□□□□ 0.91
VAV3-210ENST00000527011 GRPEL1Q9HAV7 217 aa20.76■□□□□ 0.91
VAV3-210ENST00000527011 SMC4Q9NTJ3 1288 aa20.75■□□□□ 0.91
VAV3-210ENST00000527011 KIAA1211Q6ZU35 1233 aa20.74■□□□□ 0.91
VAV3-210ENST00000527011 APBB1O00213 710 aa20.74■□□□□ 0.91
VAV3-210ENST00000527011 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.74■□□□□ 0.91
VAV3-210ENST00000527011 TDRD9Q8NDG6 1382 aaKnown RBP20.73■□□□□ 0.91
VAV3-210ENST00000527011 TPM2P07951 284 aa20.73■□□□□ 0.91
VAV3-210ENST00000527011 NAIPQ13075 1403 aa20.73■□□□□ 0.91
VAV3-210ENST00000527011 NASPP49321 788 aaPredicted RBP20.73■□□□□ 0.91
VAV3-210ENST00000527011 NCOA1Q15788 1441 aa20.73■□□□□ 0.91
VAV3-210ENST00000527011 U2AF1L5P0DN76 240 aaPredicted RBP20.72■□□□□ 0.91
VAV3-210ENST00000527011 U2AF1Q01081 240 aaKnown RBP eCLIP20.72■□□□□ 0.91
VAV3-210ENST00000527011 PANK2Q9BZ23 570 aa20.71■□□□□ 0.91
VAV3-210ENST00000527011 RRAGDQ9NQL2 400 aaPredicted RBP20.7■□□□□ 0.9
VAV3-210ENST00000527011 ANKRD30AQ9BXX3 1397 aa20.69■□□□□ 0.9
VAV3-210ENST00000527011 NCOA2Q15596 1464 aa20.68■□□□□ 0.9
VAV3-210ENST00000527011 XRCC6P12956 609 aaKnown RBP eCLIP20.66■□□□□ 0.9
VAV3-210ENST00000527011 PDZRN3Q9UPQ7 1066 aa20.66■□□□□ 0.9
VAV3-210ENST00000527011 CFTRP13569 1480 aa20.65■□□□□ 0.9
VAV3-210ENST00000527011 FOXD4L6Q3SYB3 417 aaPredicted RBP20.65■□□□□ 0.9
VAV3-210ENST00000527011 FOXD4L3Q6VB84 417 aaPredicted RBP20.65■□□□□ 0.9
VAV3-210ENST00000527011 CHMP7Q8WUX9 453 aaPredicted RBP20.65■□□□□ 0.9
VAV3-210ENST00000527011 CASKIN1Q8WXD9 1431 aa20.64■□□□□ 0.89
VAV3-210ENST00000527011 IPO8O15397 1037 aaKnown RBP20.63■□□□□ 0.89
VAV3-210ENST00000527011 NOL8Q76FK4 1167 aaKnown RBP20.63■□□□□ 0.89
VAV3-210ENST00000527011 CLCN1P35523 988 aa20.61■□□□□ 0.89
VAV3-210ENST00000527011 TBC1D2Q9BYX2 928 aa20.61■□□□□ 0.89
VAV3-210ENST00000527011 ANKRD45Q5TZF3 282 aa20.61■□□□□ 0.89
VAV3-210ENST00000527011 C8orf34Q49A92 452 aa20.61■□□□□ 0.89
VAV3-210ENST00000527011 ZKSCAN2Q63HK3 967 aa20.61■□□□□ 0.89
VAV3-210ENST00000527011 MCTP1Q6DN14 999 aa20.61■□□□□ 0.89
VAV3-210ENST00000527011 LNPKQ9C0E8 428 aa20.61■□□□□ 0.89
VAV3-210ENST00000527011 MAP7D2Q96T17 732 aa20.6■□□□□ 0.89
VAV3-210ENST00000527011 CHMP4BQ9H444 224 aaKnown RBP20.6■□□□□ 0.89
VAV3-210ENST00000527011 NBPF1Q3BBV0 1214 aa20.59■□□□□ 0.89
VAV3-210ENST00000527011 DRC7Q8IY82 874 aa20.59■□□□□ 0.89
VAV3-210ENST00000527011 RNF214Q8ND24 703 aa20.59■□□□□ 0.89
VAV3-210ENST00000527011 HNRNPMP52272 730 aaKnown RBP eCLIP20.59■□□□□ 0.89
VAV3-210ENST00000527011 CAVIN1Q6NZI2 390 aaKnown RBP20.58■□□□□ 0.88
VAV3-210ENST00000527011 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.57■□□□□ 0.88
VAV3-210ENST00000527011 MAP3K1Q13233 1512 aa20.56■□□□□ 0.88
VAV3-210ENST00000527011 CCDC173Q0VFZ6 552 aa20.56■□□□□ 0.88
VAV3-210ENST00000527011 PDCL3Q9H2J4 239 aa20.56■□□□□ 0.88
VAV3-210ENST00000527011 PPP2R1AP30153 589 aa20.56■□□□□ 0.88
VAV3-210ENST00000527011 SYAP1Q96A49 352 aaPredicted RBP20.56■□□□□ 0.88
VAV3-210ENST00000527011 CSPP1Q1MSJ5 1256 aa20.56■□□□□ 0.88
VAV3-210ENST00000527011 DZIP1LQ8IYY4 767 aaKnown RBP20.56■□□□□ 0.88
VAV3-210ENST00000527011 RNF123Q5XPI4 1314 aa20.55■□□□□ 0.88
VAV3-210ENST00000527011 PDE3AQ14432 1141 aa20.54■□□□□ 0.88
VAV3-210ENST00000527011 MPNDQ8N594 471 aa20.54■□□□□ 0.88
VAV3-210ENST00000527011 EIF3AQ14152 1382 aaKnown RBP20.54■□□□□ 0.88
VAV3-210ENST00000527011 PRDM10Q9NQV6 1147 aa20.54■□□□□ 0.88
VAV3-210ENST00000527011 FYCO1Q9BQS8 1478 aa20.53■□□□□ 0.88
VAV3-210ENST00000527011 ISY1Q9ULR0 285 aaKnown RBP20.52■□□□□ 0.88
VAV3-210ENST00000527011 SAFB2Q14151 953 aaKnown RBP eCLIP20.52■□□□□ 0.88
VAV3-210ENST00000527011 UQCRHLA0A096LP55 91 aa20.52■□□□□ 0.88
VAV3-210ENST00000527011 UQCRHP07919 91 aa20.52■□□□□ 0.88
VAV3-210ENST00000527011 ZSCAN30Q86W11 494 aa20.52■□□□□ 0.88
VAV3-210ENST00000527011 TOP2BQ02880 1626 aa20.52■□□□□ 0.87
VAV3-210ENST00000527011 CCDC144AA2RUR9 1427 aa20.51■□□□□ 0.87
VAV3-210ENST00000527011 IGHDP01880 384 aa20.51■□□□□ 0.87
VAV3-210ENST00000527011 CUX1P39880 1505 aa20.51■□□□□ 0.87
VAV3-210ENST00000527011 AQRO60306 1485 aaKnown RBP eCLIP20.51■□□□□ 0.87
VAV3-210ENST00000527011 ST18O60284 1047 aa20.5■□□□□ 0.87
VAV3-210ENST00000527011 ZNF771Q7L3S4 317 aaPredicted RBP20.5■□□□□ 0.87
VAV3-210ENST00000527011 ANKRD30BQ9BXX2 1392 aa20.5■□□□□ 0.87
VAV3-210ENST00000527011 MIA2Q96PC5 1412 aa20.49■□□□□ 0.87
VAV3-210ENST00000527011 PTPRKQ15262 1439 aa20.49■□□□□ 0.87
VAV3-210ENST00000527011 GOLGA6L4A6NEF3 574 aa20.48■□□□□ 0.87
VAV3-210ENST00000527011 ELL2O00472 640 aaPredicted RBP20.48■□□□□ 0.87
VAV3-210ENST00000527011 SEC24BO95487 1268 aa20.48■□□□□ 0.87
VAV3-210ENST00000527011 MTERF4Q7Z6M4 381 aaKnown RBP20.48■□□□□ 0.87
VAV3-210ENST00000527011 SLFN5Q08AF3 891 aa20.48■□□□□ 0.87
VAV3-210ENST00000527011 DUSP27Q5VZP5 1158 aa20.48■□□□□ 0.87
VAV3-210ENST00000527011 DDX19BQ9UMR2 479 aa20.47■□□□□ 0.87
VAV3-210ENST00000527011 FGD5Q6ZNL6 1462 aa20.46■□□□□ 0.87
VAV3-210ENST00000527011 MCCP23508 829 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms