RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 RRP7BPQ9NSQ0 103 aa26.37■■□□□ 1.81
LMX1B-203ENST00000526117 KDM5DQ9BY66 1539 aa26.37■■□□□ 1.81
LMX1B-203ENST00000526117 DEPDC5O75140 1603 aa26.36■■□□□ 1.81
LMX1B-203ENST00000526117 MROH1Q8NDA8 1641 aa26.36■■□□□ 1.81
LMX1B-203ENST00000526117 ESF1Q9H501 851 aaKnown RBP26.36■■□□□ 1.81
LMX1B-203ENST00000526117 CHIC2Q9UKJ5 165 aa26.36■■□□□ 1.81
LMX1B-203ENST00000526117 PRDM15P57071 1507 aaPredicted RBP26.35■■□□□ 1.81
LMX1B-203ENST00000526117 C3P01024 1663 aa26.35■■□□□ 1.81
LMX1B-203ENST00000526117 GGT6Q6P531 493 aa26.35■■□□□ 1.81
LMX1B-203ENST00000526117 ZC3H13Q5T200 1668 aaKnown RBP26.34■■□□□ 1.81
LMX1B-203ENST00000526117 CLTCQ00610 1675 aaKnown RBP26.34■■□□□ 1.81
LMX1B-203ENST00000526117 ANKRD50Q9ULJ7 1429 aa26.31■■□□□ 1.8
LMX1B-203ENST00000526117 ZMYM3Q14202 1370 aa26.3■■□□□ 1.8
LMX1B-203ENST00000526117 NPATQ14207 1427 aa26.3■■□□□ 1.8
LMX1B-203ENST00000526117 ABCC3O15438 1527 aa26.27■■□□□ 1.8
LMX1B-203ENST00000526117 VWDEQ8N2E2 1590 aa26.26■■□□□ 1.79
LMX1B-203ENST00000526117 WASHC2CQ9Y4E1 1318 aa26.24■■□□□ 1.79
LMX1B-203ENST00000526117 PREX1Q8TCU6 1659 aa26.23■■□□□ 1.79
LMX1B-203ENST00000526117 LMTK2Q8IWU2 1503 aa26.23■■□□□ 1.79
LMX1B-203ENST00000526117 PZPP20742 1482 aa26.23■■□□□ 1.79
LMX1B-203ENST00000526117 SETD1BQ9UPS6 1966 aaKnown RBP26.22■■□□□ 1.79
LMX1B-203ENST00000526117 CEBPAP49715 358 aaPredicted RBP26.21■■□□□ 1.79
LMX1B-203ENST00000526117 LMTK3Q96Q04 1460 aa26.21■■□□□ 1.79
LMX1B-203ENST00000526117 UNC13BO14795 1591 aa26.2■■□□□ 1.79
LMX1B-203ENST00000526117 ITGAEP38570 1179 aa26.19■■□□□ 1.78
LMX1B-203ENST00000526117 ARHGAP31Q2M1Z3 1444 aa26.19■■□□□ 1.78
LMX1B-203ENST00000526117 KANK1Q14678 1352 aa26.19■■□□□ 1.78
LMX1B-203ENST00000526117 GCC2Q8IWJ2 1684 aa26.19■■□□□ 1.78
LMX1B-203ENST00000526117 CAMSAP1Q5T5Y3 1602 aa26.18■■□□□ 1.78
LMX1B-203ENST00000526117 CEP152O94986 1710 aa26.17■■□□□ 1.78
LMX1B-203ENST00000526117 HFM1A2PYH4 1435 aa26.17■■□□□ 1.78
LMX1B-203ENST00000526117 NAIPQ13075 1403 aa26.16■■□□□ 1.78
LMX1B-203ENST00000526117 UHRF1BP1Q6BDS2 1440 aa26.14■■□□□ 1.77
LMX1B-203ENST00000526117 SPATA31D1Q6ZQQ2 1576 aa26.12■■□□□ 1.77
LMX1B-203ENST00000526117 ZNF142P52746 1687 aaPredicted RBP26.1■■□□□ 1.77
LMX1B-203ENST00000526117 IQGAP3Q86VI3 1631 aa26.1■■□□□ 1.77
LMX1B-203ENST00000526117 MYO3AQ8NEV4 1616 aa26.1■■□□□ 1.77
LMX1B-203ENST00000526117 EFCAB6Q5THR3 1501 aa26.09■■□□□ 1.77
LMX1B-203ENST00000526117 PLPPR3Q6T4P5 718 aa26.09■■□□□ 1.77
LMX1B-203ENST00000526117 TET3O43151 1660 aa26.07■■□□□ 1.76
LMX1B-203ENST00000526117 ERVK-7P63135 1459 aa26.06■■□□□ 1.76
LMX1B-203ENST00000526117 RPRD2Q5VT52 1461 aaKnown RBP26.06■■□□□ 1.76
LMX1B-203ENST00000526117 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.06■■□□□ 1.76
LMX1B-203ENST00000526117 TNRQ92752 1358 aa26.05■■□□□ 1.76
LMX1B-203ENST00000526117 NLRP1Q9C000 1473 aa26.04■■□□□ 1.76
LMX1B-203ENST00000526117 CEP170BQ9Y4F5 1589 aaPredicted RBP26.03■■□□□ 1.76
LMX1B-203ENST00000526117 FBXO31Q5XUX0 539 aaPredicted RBP26.02■■□□□ 1.76
LMX1B-203ENST00000526117 A2ML1A8K2U0 1454 aa26.01■■□□□ 1.75
LMX1B-203ENST00000526117 NUP155O75694 1391 aa25.98■■□□□ 1.75
LMX1B-203ENST00000526117 NOS1P29475 1434 aa25.97■■□□□ 1.75
LMX1B-203ENST00000526117 ACIN1Q9UKV3 1341 aaKnown RBP25.97■■□□□ 1.75
LMX1B-203ENST00000526117 E9PCH4 1651 aa25.93■■□□□ 1.74
LMX1B-203ENST00000526117 PLA2R1Q13018 1463 aa25.93■■□□□ 1.74
LMX1B-203ENST00000526117 SYNMO15061 1565 aa25.91■■□□□ 1.74
LMX1B-203ENST00000526117 HSPA2P54652 639 aa25.91■■□□□ 1.74
LMX1B-203ENST00000526117 KDM5AP29375 1690 aaKnown RBP25.9■■□□□ 1.74
LMX1B-203ENST00000526117 SETD5Q9C0A6 1442 aa25.9■■□□□ 1.74
LMX1B-203ENST00000526117 UGGT1Q9NYU2 1555 aa25.89■■□□□ 1.73
LMX1B-203ENST00000526117 STRCQ7RTU9 1775 aa25.87■■□□□ 1.73
LMX1B-203ENST00000526117 CFAP65Q6ZU64 1925 aaKnown RBP25.86■■□□□ 1.73
LMX1B-203ENST00000526117 UBR1Q8IWV7 1749 aa25.85■■□□□ 1.73
LMX1B-203ENST00000526117 PIK3C2BO00750 1634 aa25.85■■□□□ 1.73
LMX1B-203ENST00000526117 SLC52A1Q9NWF4 448 aa25.84■■□□□ 1.73
LMX1B-203ENST00000526117 PTPRTO14522 1441 aa25.82■■□□□ 1.72
LMX1B-203ENST00000526117 THEMISQ8N1K5 641 aaPredicted RBP25.82■■□□□ 1.72
LMX1B-203ENST00000526117 HRCP23327 699 aa25.81■■□□□ 1.72
LMX1B-203ENST00000526117 PKD2Q13563 968 aa25.79■■□□□ 1.72
LMX1B-203ENST00000526117 SPHKAPQ2M3C7 1700 aa25.79■■□□□ 1.72
LMX1B-203ENST00000526117 RAB3GAP2Q9H2M9 1393 aa25.79■■□□□ 1.72
LMX1B-203ENST00000526117 ADGRB3O60242 1522 aa25.78■■□□□ 1.72
LMX1B-203ENST00000526117 DMRT2Q9Y5R5 561 aa25.78■■□□□ 1.72
LMX1B-203ENST00000526117 SLIT1O75093 1534 aa25.78■■□□□ 1.72
LMX1B-203ENST00000526117 IDI1Q13907 227 aa25.77■■□□□ 1.72
LMX1B-203ENST00000526117 TRIM52Q96A61 297 aa25.77■■□□□ 1.72
LMX1B-203ENST00000526117 ARHGAP23Q9P227 1491 aa25.77■■□□□ 1.72
LMX1B-203ENST00000526117 POLR1AO95602 1720 aaPredicted RBP25.75■■□□□ 1.71
LMX1B-203ENST00000526117 TRPM2O94759 1503 aa25.75■■□□□ 1.71
LMX1B-203ENST00000526117 ILDR1Q86SU0 546 aaPredicted RBP25.73■■□□□ 1.71
LMX1B-203ENST00000526117 SLC4A1APQ9BWU0 796 aaKnown RBP25.73■■□□□ 1.71
LMX1B-203ENST00000526117 MED14O60244 1454 aa25.72■■□□□ 1.71
LMX1B-203ENST00000526117 TMEM131LA2VDJ0 1609 aa25.71■■□□□ 1.71
LMX1B-203ENST00000526117 NEURL4Q96JN8 1562 aa25.71■■□□□ 1.71
LMX1B-203ENST00000526117 TMEM2Q9UHN6 1383 aa25.69■■□□□ 1.7
LMX1B-203ENST00000526117 ANKLE2Q86XL3 938 aa25.68■■□□□ 1.7
LMX1B-203ENST00000526117 MPHOSPH9Q99550 1183 aa25.67■■□□□ 1.7
LMX1B-203ENST00000526117 SCAF11Q99590 1463 aaKnown RBP25.66■■□□□ 1.7
LMX1B-203ENST00000526117 NCKAP5LQ9HCH0 1330 aa25.65■■□□□ 1.7
LMX1B-203ENST00000526117 CLTCL1P53675 1640 aa25.64■■□□□ 1.7
LMX1B-203ENST00000526117 STAG3Q9UJ98 1225 aa25.64■■□□□ 1.7
LMX1B-203ENST00000526117 ZFYVE9O95405 1425 aa25.62■■□□□ 1.69
LMX1B-203ENST00000526117 TRIM26Q12899 539 aaPredicted RBP25.61■■□□□ 1.69
LMX1B-203ENST00000526117 IQGAP1P46940 1657 aa25.61■■□□□ 1.69
LMX1B-203ENST00000526117 MYO5BQ9ULV0 1848 aa25.6■■□□□ 1.69
LMX1B-203ENST00000526117 NPHP4O75161 1426 aaPredicted RBP25.6■■□□□ 1.69
LMX1B-203ENST00000526117 EID1Q9Y6B2 187 aa25.59■■□□□ 1.69
LMX1B-203ENST00000526117 LTKP29376 864 aa25.57■■□□□ 1.68
LMX1B-203ENST00000526117 KIF1BO60333 1816 aa25.56■■□□□ 1.68
LMX1B-203ENST00000526117 TXNDC2Q86VQ3 553 aa25.55■■□□□ 1.68
LMX1B-203ENST00000526117 RIMS2Q9UQ26 1411 aa25.54■■□□□ 1.68
LMX1B-203ENST00000526117 HDGFP51858 240 aaKnown RBP25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms