RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.32□□□□□ -0.6
CHD7-202ENST00000524602 E9PCH4 1651 aa11.31□□□□□ -0.6
CHD7-202ENST00000524602 FANCIQ9NVI1 1328 aa11.31□□□□□ -0.6
CHD7-202ENST00000524602 UNC13BO14795 1591 aa11.3□□□□□ -0.6
CHD7-202ENST00000524602 FAM135AQ9P2D6 1515 aa11.3□□□□□ -0.6
CHD7-202ENST00000524602 UHRF1BP1LA0JNW5 1464 aa11.3□□□□□ -0.6
CHD7-202ENST00000524602 MYO5CQ9NQX4 1742 aa11.3□□□□□ -0.6
CHD7-202ENST00000524602 HNRNPMP52272 730 aaKnown RBP eCLIP11.29□□□□□ -0.61e-6■■■■□ 23.4
CHD7-202ENST00000524602 LAMC1P11047 1609 aa11.29□□□□□ -0.6
CHD7-202ENST00000524602 ARHGAP5Q13017 1502 aa11.28□□□□□ -0.6
CHD7-202ENST00000524602 PLXNC1O60486 1568 aa11.28□□□□□ -0.6
CHD7-202ENST00000524602 CARD11Q9BXL7 1154 aa11.28□□□□□ -0.6
CHD7-202ENST00000524602 TRPM1Q7Z4N2 1603 aa11.28□□□□□ -0.6
CHD7-202ENST00000524602 IRX6P78412 446 aaPredicted RBP11.28□□□□□ -0.6
CHD7-202ENST00000524602 CNGB1Q14028 1251 aaPredicted RBP11.27□□□□□ -0.61
CHD7-202ENST00000524602 ZNF326Q5BKZ1 582 aaKnown RBP11.27□□□□□ -0.61
CHD7-202ENST00000524602 SYCP2Q9BX26 1530 aa11.27□□□□□ -0.61
CHD7-202ENST00000524602 PLEKHH2Q8IVE3 1493 aa11.27□□□□□ -0.61
CHD7-202ENST00000524602 RNF123Q5XPI4 1314 aa11.26□□□□□ -0.61
CHD7-202ENST00000524602 BRD4O60885 1362 aaPredicted RBP11.26□□□□□ -0.61
CHD7-202ENST00000524602 NUDCQ9Y266 331 aa11.26□□□□□ -0.61
CHD7-202ENST00000524602 IQGAP3Q86VI3 1631 aa11.26□□□□□ -0.61
CHD7-202ENST00000524602 RALBP1Q15311 655 aa11.25□□□□□ -0.61
CHD7-202ENST00000524602 EIF2AK4Q9P2K8 1649 aaKnown RBP11.24□□□□□ -0.61
CHD7-202ENST00000524602 LRPPRCP42704 1394 aaKnown RBP11.24□□□□□ -0.61
CHD7-202ENST00000524602 CCDC144AA2RUR9 1427 aa11.24□□□□□ -0.61
CHD7-202ENST00000524602 PRAG1Q86YV5 1406 aa11.24□□□□□ -0.61
CHD7-202ENST00000524602 PNISRQ8TF01 805 aaKnown RBP11.24□□□□□ -0.61
CHD7-202ENST00000524602 GPRASP1Q5JY77 1395 aa11.23□□□□□ -0.61
CHD7-202ENST00000524602 MYBBP1AQ9BQG0 1328 aaKnown RBP11.23□□□□□ -0.61
CHD7-202ENST00000524602 ATP10AO60312 1499 aa11.22□□□□□ -0.61
CHD7-202ENST00000524602 TMC1Q8TDI8 760 aa11.22□□□□□ -0.61
CHD7-202ENST00000524602 DCAF11Q8TEB1 546 aa11.22□□□□□ -0.61
CHD7-202ENST00000524602 MAGI2Q86UL8 1455 aa11.22□□□□□ -0.61
CHD7-202ENST00000524602 ST20-MTHFSA0A0A6YYL1 179 aa11.22□□□□□ -0.61
CHD7-202ENST00000524602 DUOX2Q9NRD8 1548 aa11.22□□□□□ -0.61
CHD7-202ENST00000524602 POLR3GLQ9BT43 218 aa11.21□□□□□ -0.61
CHD7-202ENST00000524602 PRDM15P57071 1507 aaPredicted RBP11.21□□□□□ -0.61
CHD7-202ENST00000524602 PLCH2O75038 1416 aa11.21□□□□□ -0.62
CHD7-202ENST00000524602 ZMYM4Q5VZL5 1548 aa11.21□□□□□ -0.62
CHD7-202ENST00000524602 ERBINQ96RT1 1412 aa11.2□□□□□ -0.62
CHD7-202ENST00000524602 INSRP06213 1382 aa11.2□□□□□ -0.62
CHD7-202ENST00000524602 WASHC2CQ9Y4E1 1318 aa11.2□□□□□ -0.62
CHD7-202ENST00000524602 KDM2AQ9Y2K7 1162 aa11.19□□□□□ -0.62
CHD7-202ENST00000524602 SENP3-EIF4A1A0A087X0R7 540 aa11.19□□□□□ -0.62
CHD7-202ENST00000524602 OSCARQ8IYS5 282 aa11.19□□□□□ -0.62
CHD7-202ENST00000524602 PARD3Q8TEW0 1356 aa11.19□□□□□ -0.62
CHD7-202ENST00000524602 A2MP01023 1474 aa11.19□□□□□ -0.62
CHD7-202ENST00000524602 PLA2R1Q13018 1463 aa11.19□□□□□ -0.62
CHD7-202ENST00000524602 COL17A1Q9UMD9 1497 aaPredicted RBP11.19□□□□□ -0.62
CHD7-202ENST00000524602 B4GALNT3Q6L9W6 998 aa11.18□□□□□ -0.62
CHD7-202ENST00000524602 WDR7Q9Y4E6 1490 aa11.18□□□□□ -0.62
CHD7-202ENST00000524602 ABCC1P33527 1531 aa11.18□□□□□ -0.62
CHD7-202ENST00000524602 RNF17Q9BXT8 1623 aaKnown RBP11.17□□□□□ -0.62
CHD7-202ENST00000524602 MSH5O43196 834 aa11.17□□□□□ -0.62
CHD7-202ENST00000524602 EFCAB2Q5VUJ9 269 aa11.17□□□□□ -0.62
CHD7-202ENST00000524602 NLRP13Q86W25 1043 aa11.17□□□□□ -0.62
CHD7-202ENST00000524602 PDE3BQ13370 1112 aa11.15□□□□□ -0.62
CHD7-202ENST00000524602 ARAP3Q8WWN8 1544 aa11.15□□□□□ -0.62
CHD7-202ENST00000524602 TRAPPC8Q9Y2L5 1435 aa11.15□□□□□ -0.63
CHD7-202ENST00000524602 ABCA9Q8IUA7 1624 aa11.14□□□□□ -0.63
CHD7-202ENST00000524602 ERICH6Q7L0X2 663 aa11.14□□□□□ -0.63
CHD7-202ENST00000524602 ASXL2Q76L83 1435 aa11.13□□□□□ -0.63
CHD7-202ENST00000524602 ANO8Q9HCE9 1232 aaPredicted RBP11.13□□□□□ -0.63
CHD7-202ENST00000524602 CCDC136Q96JN2 1154 aa11.13□□□□□ -0.63
CHD7-202ENST00000524602 PER1O15534 1290 aaPredicted RBP11.12□□□□□ -0.63
CHD7-202ENST00000524602 STAC3Q96MF2 364 aa11.12□□□□□ -0.63
CHD7-202ENST00000524602 MYT1LQ9UL68 1186 aa11.11□□□□□ -0.63
CHD7-202ENST00000524602 FANCAO15360 1455 aa11.11□□□□□ -0.63
CHD7-202ENST00000524602 TESK2Q96S53 571 aa11.11□□□□□ -0.63
CHD7-202ENST00000524602 RTEL1-TNFRSF6BF6WH68 1400 aa11.11□□□□□ -0.63
CHD7-202ENST00000524602 CEP152O94986 1710 aa11.1□□□□□ -0.63
CHD7-202ENST00000524602 BLMP54132 1417 aaPredicted RBP11.1□□□□□ -0.63
CHD7-202ENST00000524602 IQGAP1P46940 1657 aa11.1□□□□□ -0.63
CHD7-202ENST00000524602 TMF1P82094 1093 aa11.1□□□□□ -0.63
CHD7-202ENST00000524602 NBPF1Q3BBV0 1214 aa11.1□□□□□ -0.63
CHD7-202ENST00000524602 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.1□□□□□ -0.639e-7■■■□□ 16.5
CHD7-202ENST00000524602 TRPM2O94759 1503 aa11.1□□□□□ -0.63
CHD7-202ENST00000524602 MADDQ8WXG6 1647 aa11.1□□□□□ -0.63
CHD7-202ENST00000524602 SPHKAPQ2M3C7 1700 aa11.1□□□□□ -0.63
CHD7-202ENST00000524602 ZFYVE16Q7Z3T8 1539 aa11.1□□□□□ -0.63
CHD7-202ENST00000524602 AFAP1Q8N556 730 aa11.1□□□□□ -0.63
CHD7-202ENST00000524602 DEPDC5O75140 1603 aa11.09□□□□□ -0.63
CHD7-202ENST00000524602 RGL3Q3MIN7 710 aa11.09□□□□□ -0.63
CHD7-202ENST00000524602 DISP3Q9P2K9 1392 aa11.09□□□□□ -0.63
CHD7-202ENST00000524602 NEURL4Q96JN8 1562 aa11.09□□□□□ -0.63
CHD7-202ENST00000524602 RRP1P56182 461 aaKnown RBP11.09□□□□□ -0.63
CHD7-202ENST00000524602 SPAG9O60271 1321 aaKnown RBP11.08□□□□□ -0.64
CHD7-202ENST00000524602 RCAN3Q9UKA8 241 aa11.07□□□□□ -0.64
CHD7-202ENST00000524602 KIAA1210Q9ULL0 1709 aa11.07□□□□□ -0.64
CHD7-202ENST00000524602 SCAPERQ9BY12 1400 aa11.07□□□□□ -0.64
CHD7-202ENST00000524602 NPM1P06748 294 aaKnown RBP eCLIP11.07□□□□□ -0.64
CHD7-202ENST00000524602 ADGRL1O94910 1474 aa11.07□□□□□ -0.64
CHD7-202ENST00000524602 TET3O43151 1660 aa11.07□□□□□ -0.64
CHD7-202ENST00000524602 SYNMO15061 1565 aa11.07□□□□□ -0.64
CHD7-202ENST00000524602 INO80Q9ULG1 1556 aaPredicted RBP11.06□□□□□ -0.64
CHD7-202ENST00000524602 PTPRTO14522 1441 aa11.06□□□□□ -0.64
CHD7-202ENST00000524602 ATP7AQ04656 1500 aa11.06□□□□□ -0.64
CHD7-202ENST00000524602 CDCA8Q53HL2 280 aa11.05□□□□□ -0.64
CHD7-202ENST00000524602 PANK3Q9H999 370 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms