RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 PTPRKQ15262 1439 aa27.66■■■□□ 2.02
TRAPPC9-211ENST00000521700 WASHC2CQ9Y4E1 1318 aa27.66■■■□□ 2.02
TRAPPC9-211ENST00000521700 FAM50AQ14320 339 aaKnown RBP27.65■■■□□ 2.02
TRAPPC9-211ENST00000521700 PPARGC1BQ86YN6 1023 aaKnown RBP27.65■■■□□ 2.02
TRAPPC9-211ENST00000521700 DUOX2Q9NRD8 1548 aa27.65■■■□□ 2.02
TRAPPC9-211ENST00000521700 KIF15Q9NS87 1388 aa27.64■■■□□ 2.02
TRAPPC9-211ENST00000521700 CHIC2Q9UKJ5 165 aa27.64■■■□□ 2.02
TRAPPC9-211ENST00000521700 EIF2AK4Q9P2K8 1649 aaKnown RBP27.63■■■□□ 2.01
TRAPPC9-211ENST00000521700 KDM5DQ9BY66 1539 aa27.62■■■□□ 2.01
TRAPPC9-211ENST00000521700 FAM135AQ9P2D6 1515 aa27.62■■■□□ 2.01
TRAPPC9-211ENST00000521700 RNF17Q9BXT8 1623 aaKnown RBP27.62■■■□□ 2.01
TRAPPC9-211ENST00000521700 ANKRD30AQ9BXX3 1397 aa27.58■■■□□ 2.01
TRAPPC9-211ENST00000521700 FBXO31Q5XUX0 539 aaPredicted RBP27.57■■■□□ 2
TRAPPC9-211ENST00000521700 NCOA1Q15788 1441 aa27.56■■■□□ 2
TRAPPC9-211ENST00000521700 ERBINQ96RT1 1412 aa27.56■■■□□ 2
TRAPPC9-211ENST00000521700 MROH1Q8NDA8 1641 aa27.56■■■□□ 2
TRAPPC9-211ENST00000521700 STRCQ7RTU9 1775 aa27.55■■■□□ 2
TRAPPC9-211ENST00000521700 PZPP20742 1482 aa27.54■■■□□ 2
TRAPPC9-211ENST00000521700 ABCC3O15438 1527 aa27.53■■■□□ 2
TRAPPC9-211ENST00000521700 MYO3AQ8NEV4 1616 aa27.52■■■□□ 2
TRAPPC9-211ENST00000521700 ADGRL2O95490 1459 aa27.51■■■□□ 2
TRAPPC9-211ENST00000521700 ZC3H13Q5T200 1668 aaKnown RBP27.49■■□□□ 1.99
TRAPPC9-211ENST00000521700 TNRQ92752 1358 aa27.48■■□□□ 1.99
TRAPPC9-211ENST00000521700 DMRT2Q9Y5R5 561 aa27.48■■□□□ 1.99
TRAPPC9-211ENST00000521700 ZNF142P52746 1687 aaPredicted RBP27.48■■□□□ 1.99
TRAPPC9-211ENST00000521700 CEP170BQ9Y4F5 1589 aaPredicted RBP27.48■■□□□ 1.99
TRAPPC9-211ENST00000521700 CAMSAP1Q5T5Y3 1602 aa27.46■■□□□ 1.99
TRAPPC9-211ENST00000521700 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.46■■□□□ 1.99
TRAPPC9-211ENST00000521700 CEP152O94986 1710 aa27.45■■□□□ 1.99
TRAPPC9-211ENST00000521700 PRDM15P57071 1507 aaPredicted RBP27.45■■□□□ 1.98
TRAPPC9-211ENST00000521700 DEPDC5O75140 1603 aa27.44■■□□□ 1.98
TRAPPC9-211ENST00000521700 A2ML1A8K2U0 1454 aa27.44■■□□□ 1.98
TRAPPC9-211ENST00000521700 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.41■■□□□ 1.98
TRAPPC9-211ENST00000521700 FBXO41Q8TF61 875 aa27.41■■□□□ 1.98
TRAPPC9-211ENST00000521700 PTPRTO14522 1441 aa27.4■■□□□ 1.98
TRAPPC9-211ENST00000521700 NCKAP5LQ9HCH0 1330 aa27.4■■□□□ 1.98
TRAPPC9-211ENST00000521700 ANKRD50Q9ULJ7 1429 aa27.39■■□□□ 1.97
TRAPPC9-211ENST00000521700 KANK1Q14678 1352 aa27.38■■□□□ 1.97
TRAPPC9-211ENST00000521700 ITGAEP38570 1179 aa27.38■■□□□ 1.97
TRAPPC9-211ENST00000521700 SPATA31D1Q6ZQQ2 1576 aa27.38■■□□□ 1.97
TRAPPC9-211ENST00000521700 CFAP65Q6ZU64 1925 aaKnown RBP27.37■■□□□ 1.97
TRAPPC9-211ENST00000521700 ERVK-7P63135 1459 aa27.37■■□□□ 1.97
TRAPPC9-211ENST00000521700 PLA2R1Q13018 1463 aa27.37■■□□□ 1.97
TRAPPC9-211ENST00000521700 ROCK1Q13464 1354 aa27.35■■□□□ 1.97
TRAPPC9-211ENST00000521700 ARHGAP31Q2M1Z3 1444 aa27.35■■□□□ 1.97
TRAPPC9-211ENST00000521700 NLRP1Q9C000 1473 aa27.35■■□□□ 1.97
TRAPPC9-211ENST00000521700 VWDEQ8N2E2 1590 aa27.35■■□□□ 1.97
TRAPPC9-211ENST00000521700 PKD2Q13563 968 aa27.34■■□□□ 1.97
TRAPPC9-211ENST00000521700 RRBP1Q9P2E9 1410 aaKnown RBP27.32■■□□□ 1.96
TRAPPC9-211ENST00000521700 LMTK2Q8IWU2 1503 aa27.31■■□□□ 1.96
TRAPPC9-211ENST00000521700 THEMISQ8N1K5 641 aaPredicted RBP27.3■■□□□ 1.96
TRAPPC9-211ENST00000521700 UGGT1Q9NYU2 1555 aa27.28■■□□□ 1.96
TRAPPC9-211ENST00000521700 CERKQ8TCT0 537 aa27.28■■□□□ 1.96
TRAPPC9-211ENST00000521700 ANKLE2Q86XL3 938 aa27.22■■□□□ 1.95
TRAPPC9-211ENST00000521700 EFCAB6Q5THR3 1501 aa27.21■■□□□ 1.95
TRAPPC9-211ENST00000521700 UNC13BO14795 1591 aa27.21■■□□□ 1.95
TRAPPC9-211ENST00000521700 POLR1AO95602 1720 aaPredicted RBP27.19■■□□□ 1.94
TRAPPC9-211ENST00000521700 LTBP4Q8N2S1 1624 aa27.18■■□□□ 1.94
TRAPPC9-211ENST00000521700 NEURL4Q96JN8 1562 aa27.18■■□□□ 1.94
TRAPPC9-211ENST00000521700 UBR1Q8IWV7 1749 aa27.17■■□□□ 1.94
TRAPPC9-211ENST00000521700 NOS1P29475 1434 aa27.16■■□□□ 1.94
TRAPPC9-211ENST00000521700 TET3O43151 1660 aa27.15■■□□□ 1.94
TRAPPC9-211ENST00000521700 IDI1Q13907 227 aa27.15■■□□□ 1.94
TRAPPC9-211ENST00000521700 ZNF335Q9H4Z2 1342 aaPredicted RBP27.15■■□□□ 1.94
TRAPPC9-211ENST00000521700 SYNMO15061 1565 aa27.14■■□□□ 1.93
TRAPPC9-211ENST00000521700 RPRD2Q5VT52 1461 aaKnown RBP27.13■■□□□ 1.93
TRAPPC9-211ENST00000521700 PIK3C2BO00750 1634 aa27.12■■□□□ 1.93
TRAPPC9-211ENST00000521700 NUP155O75694 1391 aa27.12■■□□□ 1.93
TRAPPC9-211ENST00000521700 MED14O60244 1454 aa27.12■■□□□ 1.93
TRAPPC9-211ENST00000521700 GCC2Q8IWJ2 1684 aa27.11■■□□□ 1.93
TRAPPC9-211ENST00000521700 IQGAP3Q86VI3 1631 aa27.1■■□□□ 1.93
TRAPPC9-211ENST00000521700 NPHP4O75161 1426 aaPredicted RBP27.09■■□□□ 1.93
TRAPPC9-211ENST00000521700 SLC52A1Q9NWF4 448 aa27.08■■□□□ 1.93
TRAPPC9-211ENST00000521700 STAG3Q9UJ98 1225 aa27.08■■□□□ 1.93
TRAPPC9-211ENST00000521700 NAIPQ13075 1403 aa27.07■■□□□ 1.92
TRAPPC9-211ENST00000521700 ARHGAP23Q9P227 1491 aa27.07■■□□□ 1.92
TRAPPC9-211ENST00000521700 LTKP29376 864 aa27.07■■□□□ 1.92
TRAPPC9-211ENST00000521700 SLIT1O75093 1534 aa27.06■■□□□ 1.92
TRAPPC9-211ENST00000521700 E9PCH4 1651 aa27.05■■□□□ 1.92
TRAPPC9-211ENST00000521700 TXNDC2Q86VQ3 553 aa27.05■■□□□ 1.92
TRAPPC9-211ENST00000521700 KDM5AP29375 1690 aaKnown RBP27.04■■□□□ 1.92
TRAPPC9-211ENST00000521700 IQGAP1P46940 1657 aa27.03■■□□□ 1.92
TRAPPC9-211ENST00000521700 SCAF11Q99590 1463 aaKnown RBP27.03■■□□□ 1.92
TRAPPC9-211ENST00000521700 TMEM2Q9UHN6 1383 aa27.03■■□□□ 1.92
TRAPPC9-211ENST00000521700 EID1Q9Y6B2 187 aa27.01■■□□□ 1.91
TRAPPC9-211ENST00000521700 IQSEC2Q5JU85 1478 aa27■■□□□ 1.91
TRAPPC9-211ENST00000521700 HFM1A2PYH4 1435 aa26.99■■□□□ 1.91
TRAPPC9-211ENST00000521700 ADGRB3O60242 1522 aa26.99■■□□□ 1.91
TRAPPC9-211ENST00000521700 CPS1P31327 1500 aa26.91■■□□□ 1.9
TRAPPC9-211ENST00000521700 TMEM131LA2VDJ0 1609 aa26.91■■□□□ 1.9
TRAPPC9-211ENST00000521700 MYO5BQ9ULV0 1848 aa26.91■■□□□ 1.9
TRAPPC9-211ENST00000521700 TRIM52Q96A61 297 aa26.9■■□□□ 1.9
TRAPPC9-211ENST00000521700 CHGAP10645 457 aaKnown RBP26.89■■□□□ 1.9
TRAPPC9-211ENST00000521700 STRCP1A6NGW2 1772 aa26.86■■□□□ 1.89
TRAPPC9-211ENST00000521700 ZFYVE9O95405 1425 aa26.86■■□□□ 1.89
TRAPPC9-211ENST00000521700 SPHKAPQ2M3C7 1700 aa26.85■■□□□ 1.89
TRAPPC9-211ENST00000521700 RIMS2Q9UQ26 1411 aa26.84■■□□□ 1.89
TRAPPC9-211ENST00000521700 UBAP1LF5GYI3 381 aa26.83■■□□□ 1.89
TRAPPC9-211ENST00000521700 HDGFP51858 240 aaKnown RBP26.83■■□□□ 1.89
TRAPPC9-211ENST00000521700 SLC26A8Q96RN1 970 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms