RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 NISCHQ9Y2I1 1504 aa43.89■■■■■ 4.62
TRAPPC9-211ENST00000521700 CCDC180Q9P1Z9 1646 aa39.1■■■■□ 3.85
TRAPPC9-211ENST00000521700 ABCC9O60706 1549 aa38.58■■■■□ 3.77
TRAPPC9-211ENST00000521700 RB1CC1Q8TDY2 1594 aa36.95■■■■□ 3.51
TRAPPC9-211ENST00000521700 DCAF8L2P0C7V8 631 aa36.85■■■■□ 3.49
TRAPPC9-211ENST00000521700 NACADO15069 1562 aa36.85■■■■□ 3.49
TRAPPC9-211ENST00000521700 MYO15BQ96JP2 1530 aa36.53■■■■□ 3.44
TRAPPC9-211ENST00000521700 ZCCHC6Q5VYS8 1495 aaKnown RBP36.49■■■■□ 3.43
TRAPPC9-211ENST00000521700 DCAF1Q9Y4B6 1507 aa36.28■■■■□ 3.4
TRAPPC9-211ENST00000521700 UNC13AQ9UPW8 1703 aa36.13■■■■□ 3.37
TRAPPC9-211ENST00000521700 PABPN1Q86U42 306 aaKnown RBP eCLIP36.05■■■■□ 3.36
TRAPPC9-211ENST00000521700 BICRAQ9NZM4 1560 aa35.88■■■■□ 3.33
TRAPPC9-211ENST00000521700 DNAJC5BQ9UF47 199 aa35.74■■■■□ 3.31
TRAPPC9-211ENST00000521700 SCRIBQ14160 1630 aa35.68■■■■□ 3.3
TRAPPC9-211ENST00000521700 SHROOM4Q9ULL8 1493 aa35.4■■■■□ 3.26
TRAPPC9-211ENST00000521700 EIF4G1Q04637 1599 aaKnown RBP34.93■■■■□ 3.18
TRAPPC9-211ENST00000521700 CC2D2AQ9P2K1 1620 aa34.87■■■■□ 3.17
TRAPPC9-211ENST00000521700 CECR2Q9BXF3 1484 aa34.69■■■■□ 3.14
TRAPPC9-211ENST00000521700 SMARCA4P51532 1647 aa34.1■■■■□ 3.05
TRAPPC9-211ENST00000521700 NCAPD3P42695 1498 aa34.03■■■■□ 3.04
TRAPPC9-211ENST00000521700 BAZ1AQ9NRL2 1556 aaPredicted RBP34.02■■■■□ 3.04
TRAPPC9-211ENST00000521700 ATAD2BQ9ULI0 1458 aa34.01■■■■□ 3.03
TRAPPC9-211ENST00000521700 SMARCA2P51531 1590 aa33.92■■■■□ 3.02
TRAPPC9-211ENST00000521700 MROH2BQ7Z745 1585 aa33.85■■■■□ 3.01
TRAPPC9-211ENST00000521700 HMGXB3Q12766 1538 aa33.79■■■■□ 3
TRAPPC9-211ENST00000521700 PEG3Q9GZU2 1588 aa33.77■■■■□ 3
TRAPPC9-211ENST00000521700 BAZ1BQ9UIG0 1483 aaKnown RBP33.69■■■□□ 2.98
TRAPPC9-211ENST00000521700 WIZO95785 1651 aa33.46■■■□□ 2.95
TRAPPC9-211ENST00000521700 RSF1Q96T23 1441 aaPredicted RBP33.36■■■□□ 2.93
TRAPPC9-211ENST00000521700 NESP48681 1621 aa33.32■■■□□ 2.92
TRAPPC9-211ENST00000521700 ERCC6Q03468 1493 aa33.25■■■□□ 2.91
TRAPPC9-211ENST00000521700 LAMC3Q9Y6N6 1575 aa33.14■■■□□ 2.9
TRAPPC9-211ENST00000521700 TOP2AP11388 1531 aaKnown RBP33.06■■■□□ 2.88
TRAPPC9-211ENST00000521700 CADPSQ9ULU8 1353 aa33.03■■■□□ 2.88
TRAPPC9-211ENST00000521700 CUX2O14529 1486 aa32.98■■■□□ 2.87
TRAPPC9-211ENST00000521700 PDS5BQ9NTI5 1447 aa32.94■■■□□ 2.86
TRAPPC9-211ENST00000521700 KIF21AQ7Z4S6 1674 aa32.88■■■□□ 2.85
TRAPPC9-211ENST00000521700 THOC2Q8NI27 1593 aaKnown RBP32.82■■■□□ 2.84
TRAPPC9-211ENST00000521700 CFTRP13569 1480 aa32.77■■■□□ 2.84
TRAPPC9-211ENST00000521700 CCDC88BA6NC98 1476 aa32.71■■■□□ 2.83
TRAPPC9-211ENST00000521700 DNAJC5Q9H3Z4 198 aa32.66■■■□□ 2.82
TRAPPC9-211ENST00000521700 FANCD2Q9BXW9 1451 aa32.64■■■□□ 2.82
TRAPPC9-211ENST00000521700 MRC2Q9UBG0 1479 aa32.61■■■□□ 2.81
TRAPPC9-211ENST00000521700 CEP164Q9UPV0 1460 aa32.61■■■□□ 2.81
TRAPPC9-211ENST00000521700 WDR62O43379 1518 aa32.51■■■□□ 2.8
TRAPPC9-211ENST00000521700 PRDM2Q13029 1718 aa32.45■■■□□ 2.78
TRAPPC9-211ENST00000521700 SUPT5HO00267 1087 aaKnown RBP32.35■■■□□ 2.77
TRAPPC9-211ENST00000521700 URB2Q14146 1524 aaKnown RBP32.34■■■□□ 2.77
TRAPPC9-211ENST00000521700 TOPBP1Q92547 1522 aa32.09■■■□□ 2.73
TRAPPC9-211ENST00000521700 ABCC8Q09428 1581 aa32.05■■■□□ 2.72
TRAPPC9-211ENST00000521700 DNMBPQ6XZF7 1577 aa32■■■□□ 2.71
TRAPPC9-211ENST00000521700 IFT140Q96RY7 1462 aa31.94■■■□□ 2.7
TRAPPC9-211ENST00000521700 ZNF608Q9ULD9 1512 aaPredicted RBP31.85■■■□□ 2.69
TRAPPC9-211ENST00000521700 POLA1P09884 1462 aaPredicted RBP31.8■■■□□ 2.68
TRAPPC9-211ENST00000521700 TARBP1Q13395 1621 aaKnown RBP31.75■■■□□ 2.67
TRAPPC9-211ENST00000521700 CUX1P39880 1505 aa31.75■■■□□ 2.67
TRAPPC9-211ENST00000521700 RAD54L2Q9Y4B4 1467 aa31.7■■■□□ 2.66
TRAPPC9-211ENST00000521700 SOGA1O94964 1423 aa31.68■■■□□ 2.66
TRAPPC9-211ENST00000521700 FGD5Q6ZNL6 1462 aa31.68■■■□□ 2.66
TRAPPC9-211ENST00000521700 EIF4G3O43432 1585 aaKnown RBP31.67■■■□□ 2.66
TRAPPC9-211ENST00000521700 AQRO60306 1485 aaKnown RBP eCLIP31.65■■■□□ 2.663e-6■■■■■ 26.9
TRAPPC9-211ENST00000521700 OSCARQ8IYS5 282 aa31.63■■■□□ 2.65
TRAPPC9-211ENST00000521700 TDRD9Q8NDG6 1382 aaKnown RBP31.56■■■□□ 2.64
TRAPPC9-211ENST00000521700 WRNQ14191 1432 aaPredicted RBP eCLIP31.44■■■□□ 2.62
TRAPPC9-211ENST00000521700 WDR97A6NE52 1622 aa31.44■■■□□ 2.62
TRAPPC9-211ENST00000521700 TOP2BQ02880 1626 aa31.38■■■□□ 2.61
TRAPPC9-211ENST00000521700 SYNJ1O43426 1573 aa31.38■■■□□ 2.61
TRAPPC9-211ENST00000521700 BIVM-ERCC5R4GMW8 1640 aa31.38■■■□□ 2.61
TRAPPC9-211ENST00000521700 ABCA10Q8WWZ4 1543 aa31.35■■■□□ 2.61
TRAPPC9-211ENST00000521700 CHD1O14646 1710 aa31.34■■■□□ 2.61
TRAPPC9-211ENST00000521700 FBLN2P98095 1184 aa31.33■■■□□ 2.61
TRAPPC9-211ENST00000521700 GRIN2BQ13224 1484 aa31.32■■■□□ 2.6
TRAPPC9-211ENST00000521700 SNAPC4Q5SXM2 1469 aa31.32■■■□□ 2.6
TRAPPC9-211ENST00000521700 GAPVD1Q14C86 1478 aa31.29■■■□□ 2.6
TRAPPC9-211ENST00000521700 MAGI1Q96QZ7 1491 aaPredicted RBP31.25■■■□□ 2.59
TRAPPC9-211ENST00000521700 ABCA5Q8WWZ7 1642 aa31.24■■■□□ 2.59
TRAPPC9-211ENST00000521700 PBRM1Q86U86 1689 aa31.22■■■□□ 2.59
TRAPPC9-211ENST00000521700 CHMP7Q8WUX9 453 aaPredicted RBP31.2■■■□□ 2.59
TRAPPC9-211ENST00000521700 TRIM41Q8WV44 630 aa31.18■■■□□ 2.58
TRAPPC9-211ENST00000521700 SYNJ2O15056 1496 aa31.14■■■□□ 2.58
TRAPPC9-211ENST00000521700 RIMBP3CA6NJZ7 1639 aa31.12■■■□□ 2.57
TRAPPC9-211ENST00000521700 RIMBP3BA6NNM3 1639 aa31.12■■■□□ 2.57
TRAPPC9-211ENST00000521700 RIMBP3Q9UFD9 1639 aa31.12■■■□□ 2.57
TRAPPC9-211ENST00000521700 ARHGEF11O15085 1522 aa31.08■■■□□ 2.57
TRAPPC9-211ENST00000521700 CLASP1Q7Z460 1538 aa30.99■■■□□ 2.55
TRAPPC9-211ENST00000521700 ERICH3Q5RHP9 1530 aa30.96■■■□□ 2.55
TRAPPC9-211ENST00000521700 ADAMTS12P58397 1594 aa30.95■■■□□ 2.54
TRAPPC9-211ENST00000521700 FHAD1B1AJZ9 1412 aa30.92■■■□□ 2.54
TRAPPC9-211ENST00000521700 GRIN2AQ12879 1464 aa30.91■■■□□ 2.54
TRAPPC9-211ENST00000521700 CYB5RLQ6IPT4 315 aa30.87■■■□□ 2.53
TRAPPC9-211ENST00000521700 ARAP1Q96P48 1450 aa30.82■■■□□ 2.52
TRAPPC9-211ENST00000521700 NUP160Q12769 1436 aa30.8■■■□□ 2.52
TRAPPC9-211ENST00000521700 KIF27Q86VH2 1401 aa30.8■■■□□ 2.52
TRAPPC9-211ENST00000521700 CEP170Q5SW79 1584 aa30.78■■■□□ 2.52
TRAPPC9-211ENST00000521700 IGF1RP08069 1367 aa30.76■■■□□ 2.51
TRAPPC9-211ENST00000521700 CUL7Q14999 1698 aa30.61■■■□□ 2.49
TRAPPC9-211ENST00000521700 SHROOM2Q13796 1616 aa30.58■■■□□ 2.49
TRAPPC9-211ENST00000521700 ERCC6L2Q5T890 1561 aa30.58■■■□□ 2.49
TRAPPC9-211ENST00000521700 CARMIL1Q5VZK9 1371 aa30.54■■■□□ 2.48
TRAPPC9-211ENST00000521700 JPH4Q96JJ6 628 aa30.53■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms