RNA–Protein interactions for RNA: ENST00000521368.5

CTNNA1-226, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-226ENST00000521368 MROH2AA6NES4 1674 aa20.94■□□□□ 0.94
CTNNA1-226ENST00000521368 ITGAEP38570 1179 aa20.94■□□□□ 0.94
CTNNA1-226ENST00000521368 DEPDC5O75140 1603 aa20.93■□□□□ 0.94
CTNNA1-226ENST00000521368 GGT6Q6P531 493 aa20.92■□□□□ 0.94
CTNNA1-226ENST00000521368 ANKRD50Q9ULJ7 1429 aa20.92■□□□□ 0.94
CTNNA1-226ENST00000521368 MROH1Q8NDA8 1641 aa20.92■□□□□ 0.94
CTNNA1-226ENST00000521368 PRDM15P57071 1507 aaPredicted RBP20.91■□□□□ 0.94
CTNNA1-226ENST00000521368 ESF1Q9H501 851 aaKnown RBP20.91■□□□□ 0.94
CTNNA1-226ENST00000521368 KDM5DQ9BY66 1539 aa20.9■□□□□ 0.94
CTNNA1-226ENST00000521368 AEBP2Q6ZN18 517 aaPredicted RBP20.9■□□□□ 0.94
CTNNA1-226ENST00000521368 CLTCQ00610 1675 aaKnown RBP20.89■□□□□ 0.94
CTNNA1-226ENST00000521368 ZC3H13Q5T200 1668 aaKnown RBP20.89■□□□□ 0.94
CTNNA1-226ENST00000521368 C3P01024 1663 aa20.87■□□□□ 0.93
CTNNA1-226ENST00000521368 GCC2Q8IWJ2 1684 aa20.87■□□□□ 0.93
CTNNA1-226ENST00000521368 HFM1A2PYH4 1435 aa20.84■□□□□ 0.93
CTNNA1-226ENST00000521368 UNC13BO14795 1591 aa20.84■□□□□ 0.93
CTNNA1-226ENST00000521368 ABCC3O15438 1527 aa20.83■□□□□ 0.93
CTNNA1-226ENST00000521368 NAIPQ13075 1403 aa20.83■□□□□ 0.93
CTNNA1-226ENST00000521368 VWDEQ8N2E2 1590 aa20.83■□□□□ 0.92
CTNNA1-226ENST00000521368 ZMYM3Q14202 1370 aa20.83■□□□□ 0.92
CTNNA1-226ENST00000521368 WASHC2CQ9Y4E1 1318 aa20.82■□□□□ 0.92
CTNNA1-226ENST00000521368 KANK1Q14678 1352 aa20.81■□□□□ 0.92
CTNNA1-226ENST00000521368 CEP152O94986 1710 aa20.81■□□□□ 0.92
CTNNA1-226ENST00000521368 LMTK2Q8IWU2 1503 aa20.79■□□□□ 0.92
CTNNA1-226ENST00000521368 NPATQ14207 1427 aa20.78■□□□□ 0.92
CTNNA1-226ENST00000521368 CAMSAP1Q5T5Y3 1602 aa20.78■□□□□ 0.92
CTNNA1-226ENST00000521368 PZPP20742 1482 aa20.78■□□□□ 0.92
CTNNA1-226ENST00000521368 CEBPAP49715 358 aaPredicted RBP20.77■□□□□ 0.92
CTNNA1-226ENST00000521368 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.75■□□□□ 0.913e-7■■□□□ 12.6
CTNNA1-226ENST00000521368 ARHGAP31Q2M1Z3 1444 aa20.75■□□□□ 0.91
CTNNA1-226ENST00000521368 IQGAP3Q86VI3 1631 aa20.75■□□□□ 0.91
CTNNA1-226ENST00000521368 PREX1Q8TCU6 1659 aa20.73■□□□□ 0.91
CTNNA1-226ENST00000521368 SETD1BQ9UPS6 1966 aaKnown RBP20.72■□□□□ 0.91
CTNNA1-226ENST00000521368 PLPPR3Q6T4P5 718 aa20.72■□□□□ 0.91
CTNNA1-226ENST00000521368 TET3O43151 1660 aa20.72■□□□□ 0.91
CTNNA1-226ENST00000521368 EFCAB6Q5THR3 1501 aa20.72■□□□□ 0.91
CTNNA1-226ENST00000521368 SPATA31D1Q6ZQQ2 1576 aa20.69■□□□□ 0.9
CTNNA1-226ENST00000521368 NUP155O75694 1391 aa20.68■□□□□ 0.9
CTNNA1-226ENST00000521368 UHRF1BP1Q6BDS2 1440 aa20.68■□□□□ 0.9
CTNNA1-226ENST00000521368 RPRD2Q5VT52 1461 aaKnown RBP20.68■□□□□ 0.9
CTNNA1-226ENST00000521368 LMTK3Q96Q04 1460 aa20.68■□□□□ 0.9
CTNNA1-226ENST00000521368 SETD5Q9C0A6 1442 aa20.67■□□□□ 0.9
CTNNA1-226ENST00000521368 ERVK-7P63135 1459 aa20.67■□□□□ 0.9
CTNNA1-226ENST00000521368 ACIN1Q9UKV3 1341 aaKnown RBP20.66■□□□□ 0.9
CTNNA1-226ENST00000521368 MYO3AQ8NEV4 1616 aa20.66■□□□□ 0.9
CTNNA1-226ENST00000521368 ZNF142P52746 1687 aaPredicted RBP20.64■□□□□ 0.9
CTNNA1-226ENST00000521368 TNRQ92752 1358 aa20.64■□□□□ 0.89
CTNNA1-226ENST00000521368 FBXO31Q5XUX0 539 aaPredicted RBP20.63■□□□□ 0.89
CTNNA1-226ENST00000521368 E9PCH4 1651 aa20.62■□□□□ 0.89
CTNNA1-226ENST00000521368 NLRP1Q9C000 1473 aa20.61■□□□□ 0.89
CTNNA1-226ENST00000521368 CEP170BQ9Y4F5 1589 aaPredicted RBP20.6■□□□□ 0.89
CTNNA1-226ENST00000521368 NOS1P29475 1434 aa20.6■□□□□ 0.89
CTNNA1-226ENST00000521368 RAB3GAP2Q9H2M9 1393 aa20.59■□□□□ 0.89
CTNNA1-226ENST00000521368 A2ML1A8K2U0 1454 aa20.58■□□□□ 0.89
CTNNA1-226ENST00000521368 CFAP65Q6ZU64 1925 aaKnown RBP20.58■□□□□ 0.88
CTNNA1-226ENST00000521368 TRIM52Q96A61 297 aa20.57■□□□□ 0.88
CTNNA1-226ENST00000521368 SYNMO15061 1565 aa20.56■□□□□ 0.88
CTNNA1-226ENST00000521368 HRCP23327 699 aa20.56■□□□□ 0.88
CTNNA1-226ENST00000521368 TRIM26Q12899 539 aaPredicted RBP20.56■□□□□ 0.88
CTNNA1-226ENST00000521368 KDM5AP29375 1690 aaKnown RBP20.52■□□□□ 0.88
CTNNA1-226ENST00000521368 SPHKAPQ2M3C7 1700 aa20.52■□□□□ 0.88
CTNNA1-226ENST00000521368 UGGT1Q9NYU2 1555 aa20.51■□□□□ 0.87
CTNNA1-226ENST00000521368 SLC4A1APQ9BWU0 796 aaKnown RBP20.51■□□□□ 0.87
CTNNA1-226ENST00000521368 PIK3C2BO00750 1634 aa20.51■□□□□ 0.87
CTNNA1-226ENST00000521368 SLC52A1Q9NWF4 448 aa20.5■□□□□ 0.87
CTNNA1-226ENST00000521368 PTPRTO14522 1441 aa20.5■□□□□ 0.87
CTNNA1-226ENST00000521368 PLA2R1Q13018 1463 aa20.5■□□□□ 0.87
CTNNA1-226ENST00000521368 HSPA2P54652 639 aa20.49■□□□□ 0.87
CTNNA1-226ENST00000521368 UBR1Q8IWV7 1749 aa20.49■□□□□ 0.87
CTNNA1-226ENST00000521368 PKD2Q13563 968 aa20.47■□□□□ 0.87
CTNNA1-226ENST00000521368 TRPM2O94759 1503 aa20.47■□□□□ 0.87
CTNNA1-226ENST00000521368 MPHOSPH9Q99550 1183 aa20.46■□□□□ 0.87
CTNNA1-226ENST00000521368 ADGRB3O60242 1522 aa20.45■□□□□ 0.86
CTNNA1-226ENST00000521368 IDI1Q13907 227 aa20.45■□□□□ 0.86
CTNNA1-226ENST00000521368 THEMISQ8N1K5 641 aaPredicted RBP20.45■□□□□ 0.86
CTNNA1-226ENST00000521368 STRCQ7RTU9 1775 aa20.44■□□□□ 0.86
CTNNA1-226ENST00000521368 SLIT1O75093 1534 aa20.41■□□□□ 0.86
CTNNA1-226ENST00000521368 TMEM131LA2VDJ0 1609 aa20.41■□□□□ 0.86
CTNNA1-226ENST00000521368 POLR1AO95602 1720 aaPredicted RBP20.4■□□□□ 0.86
CTNNA1-226ENST00000521368 CLTCL1P53675 1640 aa20.39■□□□□ 0.86
CTNNA1-226ENST00000521368 ARHGAP23Q9P227 1491 aa20.39■□□□□ 0.85
CTNNA1-226ENST00000521368 STAG3Q9UJ98 1225 aa20.37■□□□□ 0.85
CTNNA1-226ENST00000521368 MYO5BQ9ULV0 1848 aa20.36■□□□□ 0.85
CTNNA1-226ENST00000521368 TMEM2Q9UHN6 1383 aa20.35■□□□□ 0.85
CTNNA1-226ENST00000521368 DMRT2Q9Y5R5 561 aa20.35■□□□□ 0.85
CTNNA1-226ENST00000521368 KIF1BO60333 1816 aa20.34■□□□□ 0.85
CTNNA1-226ENST00000521368 NEURL4Q96JN8 1562 aa20.34■□□□□ 0.85
CTNNA1-226ENST00000521368 FOXD1Q16676 465 aa20.34■□□□□ 0.85
CTNNA1-226ENST00000521368 ANKLE2Q86XL3 938 aa20.34■□□□□ 0.85
CTNNA1-226ENST00000521368 MED14O60244 1454 aa20.33■□□□□ 0.85
CTNNA1-226ENST00000521368 SCAF11Q99590 1463 aaKnown RBP20.32■□□□□ 0.84
CTNNA1-226ENST00000521368 CCDC144AA2RUR9 1427 aa20.32■□□□□ 0.84
CTNNA1-226ENST00000521368 NCKAP5LQ9HCH0 1330 aa20.31■□□□□ 0.84
CTNNA1-226ENST00000521368 ZFYVE9O95405 1425 aa20.3■□□□□ 0.84
CTNNA1-226ENST00000521368 CHGAP10645 457 aaKnown RBP20.29■□□□□ 0.84
CTNNA1-226ENST00000521368 EID1Q9Y6B2 187 aa20.29■□□□□ 0.84
CTNNA1-226ENST00000521368 ANKRD30BQ9BXX2 1392 aa20.28■□□□□ 0.84
CTNNA1-226ENST00000521368 IQGAP1P46940 1657 aa20.28■□□□□ 0.84
CTNNA1-226ENST00000521368 TXNDC2Q86VQ3 553 aa20.27■□□□□ 0.84
CTNNA1-226ENST00000521368 NPHP4O75161 1426 aaPredicted RBP20.27■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms