RNA–Protein interactions for RNA: ENST00000521368.5

CTNNA1-226, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-226ENST00000521368 NISCHQ9Y2I1 1504 aa33.26■■■□□ 2.91
CTNNA1-226ENST00000521368 CCDC180Q9P1Z9 1646 aa29.55■■■□□ 2.32
CTNNA1-226ENST00000521368 ABCC9O60706 1549 aa28.6■■■□□ 2.17
CTNNA1-226ENST00000521368 ZCCHC6Q5VYS8 1495 aaKnown RBP27.76■■■□□ 2.04
CTNNA1-226ENST00000521368 NACADO15069 1562 aa27.71■■■□□ 2.03
CTNNA1-226ENST00000521368 RB1CC1Q8TDY2 1594 aa27.69■■■□□ 2.02
CTNNA1-226ENST00000521368 MYO15BQ96JP2 1530 aa27.65■■■□□ 2.02
CTNNA1-226ENST00000521368 DCAF1Q9Y4B6 1507 aa27.59■■■□□ 2.01
CTNNA1-226ENST00000521368 DCAF8L2P0C7V8 631 aa27.56■■■□□ 2
CTNNA1-226ENST00000521368 UNC13AQ9UPW8 1703 aa27.05■■□□□ 1.92
CTNNA1-226ENST00000521368 SCRIBQ14160 1630 aa26.88■■□□□ 1.89
CTNNA1-226ENST00000521368 BICRAQ9NZM4 1560 aa26.82■■□□□ 1.88
CTNNA1-226ENST00000521368 PABPN1Q86U42 306 aaKnown RBP eCLIP26.7■■□□□ 1.86
CTNNA1-226ENST00000521368 SHROOM4Q9ULL8 1493 aa26.64■■□□□ 1.86
CTNNA1-226ENST00000521368 EIF4G1Q04637 1599 aaKnown RBP26.09■■□□□ 1.77
CTNNA1-226ENST00000521368 DNAJC5BQ9UF47 199 aa26.03■■□□□ 1.76
CTNNA1-226ENST00000521368 CC2D2AQ9P2K1 1620 aa25.93■■□□□ 1.74
CTNNA1-226ENST00000521368 CECR2Q9BXF3 1484 aa25.84■■□□□ 1.73
CTNNA1-226ENST00000521368 BAZ1AQ9NRL2 1556 aaPredicted RBP25.78■■□□□ 1.72
CTNNA1-226ENST00000521368 SMARCA4P51532 1647 aa25.77■■□□□ 1.72
CTNNA1-226ENST00000521368 MROH2BQ7Z745 1585 aa25.61■■□□□ 1.69
CTNNA1-226ENST00000521368 SMARCA2P51531 1590 aa25.58■■□□□ 1.69
CTNNA1-226ENST00000521368 ATAD2BQ9ULI0 1458 aa25.57■■□□□ 1.68
CTNNA1-226ENST00000521368 PEG3Q9GZU2 1588 aa25.56■■□□□ 1.68
CTNNA1-226ENST00000521368 NCAPD3P42695 1498 aa25.54■■□□□ 1.68
CTNNA1-226ENST00000521368 HMGXB3Q12766 1538 aa25.47■■□□□ 1.67
CTNNA1-226ENST00000521368 RSF1Q96T23 1441 aaPredicted RBP25.38■■□□□ 1.65
CTNNA1-226ENST00000521368 BAZ1BQ9UIG0 1483 aaKnown RBP25.37■■□□□ 1.65
CTNNA1-226ENST00000521368 WIZO95785 1651 aa25.34■■□□□ 1.65
CTNNA1-226ENST00000521368 TOP2AP11388 1531 aaKnown RBP25.12■■□□□ 1.61
CTNNA1-226ENST00000521368 LAMC3Q9Y6N6 1575 aa24.87■■□□□ 1.57
CTNNA1-226ENST00000521368 NESP48681 1621 aa24.81■■□□□ 1.56
CTNNA1-226ENST00000521368 CADPSQ9ULU8 1353 aa24.79■■□□□ 1.56
CTNNA1-226ENST00000521368 CCDC88BA6NC98 1476 aa24.78■■□□□ 1.56
CTNNA1-226ENST00000521368 SUPT5HO00267 1087 aaKnown RBP24.78■■□□□ 1.56
CTNNA1-226ENST00000521368 CFTRP13569 1480 aa24.7■■□□□ 1.55
CTNNA1-226ENST00000521368 PDS5BQ9NTI5 1447 aa24.66■■□□□ 1.54
CTNNA1-226ENST00000521368 ERCC6Q03468 1493 aa24.65■■□□□ 1.54
CTNNA1-226ENST00000521368 PRDM2Q13029 1718 aa24.58■■□□□ 1.53
CTNNA1-226ENST00000521368 KIF21AQ7Z4S6 1674 aa24.57■■□□□ 1.52
CTNNA1-226ENST00000521368 FANCD2Q9BXW9 1451 aa24.5■■□□□ 1.51
CTNNA1-226ENST00000521368 THOC2Q8NI27 1593 aaKnown RBP24.46■■□□□ 1.51
CTNNA1-226ENST00000521368 CEP164Q9UPV0 1460 aa24.46■■□□□ 1.51
CTNNA1-226ENST00000521368 CUX2O14529 1486 aa24.39■■□□□ 1.5
CTNNA1-226ENST00000521368 MRC2Q9UBG0 1479 aa24.38■■□□□ 1.49
CTNNA1-226ENST00000521368 WDR62O43379 1518 aa24.33■■□□□ 1.49
CTNNA1-226ENST00000521368 URB2Q14146 1524 aaKnown RBP24.24■■□□□ 1.47
CTNNA1-226ENST00000521368 ABCC8Q09428 1581 aa24.19■■□□□ 1.46
CTNNA1-226ENST00000521368 DNMBPQ6XZF7 1577 aa24.15■■□□□ 1.46
CTNNA1-226ENST00000521368 TOPBP1Q92547 1522 aa24.14■■□□□ 1.45
CTNNA1-226ENST00000521368 CUX1P39880 1505 aa24.02■■□□□ 1.44
CTNNA1-226ENST00000521368 POLA1P09884 1462 aaPredicted RBP23.94■■□□□ 1.42
CTNNA1-226ENST00000521368 IFT140Q96RY7 1462 aa23.94■■□□□ 1.42
CTNNA1-226ENST00000521368 WRNQ14191 1432 aaPredicted RBP eCLIP23.93■■□□□ 1.42
CTNNA1-226ENST00000521368 BIVM-ERCC5R4GMW8 1640 aa23.91■■□□□ 1.42
CTNNA1-226ENST00000521368 FGD5Q6ZNL6 1462 aa23.9■■□□□ 1.42
CTNNA1-226ENST00000521368 TOP2BQ02880 1626 aa23.89■■□□□ 1.42
CTNNA1-226ENST00000521368 TARBP1Q13395 1621 aaKnown RBP23.88■■□□□ 1.41
CTNNA1-226ENST00000521368 SYNJ1O43426 1573 aa23.86■■□□□ 1.41
CTNNA1-226ENST00000521368 SOGA1O94964 1423 aa23.83■■□□□ 1.4
CTNNA1-226ENST00000521368 RAD54L2Q9Y4B4 1467 aa23.79■■□□□ 1.4
CTNNA1-226ENST00000521368 ZNF608Q9ULD9 1512 aaPredicted RBP23.78■■□□□ 1.4
CTNNA1-226ENST00000521368 WDR97A6NE52 1622 aa23.77■■□□□ 1.4
CTNNA1-226ENST00000521368 EIF4G3O43432 1585 aaKnown RBP23.74■■□□□ 1.39
CTNNA1-226ENST00000521368 ABCA10Q8WWZ4 1543 aa23.72■■□□□ 1.39
CTNNA1-226ENST00000521368 AQRO60306 1485 aaKnown RBP eCLIP23.66■■□□□ 1.383e-7■■■■■ 35.5
CTNNA1-226ENST00000521368 TDRD9Q8NDG6 1382 aaKnown RBP23.64■■□□□ 1.37
CTNNA1-226ENST00000521368 ABCA5Q8WWZ7 1642 aa23.62■■□□□ 1.37
CTNNA1-226ENST00000521368 GAPVD1Q14C86 1478 aa23.57■■□□□ 1.36
CTNNA1-226ENST00000521368 GRIN2BQ13224 1484 aa23.56■■□□□ 1.36
CTNNA1-226ENST00000521368 PBRM1Q86U86 1689 aa23.54■■□□□ 1.36
CTNNA1-226ENST00000521368 MAGI1Q96QZ7 1491 aaPredicted RBP23.49■■□□□ 1.35
CTNNA1-226ENST00000521368 SNAPC4Q5SXM2 1469 aa23.48■■□□□ 1.35
CTNNA1-226ENST00000521368 ERICH3Q5RHP9 1530 aa23.45■■□□□ 1.34
CTNNA1-226ENST00000521368 TRIM41Q8WV44 630 aa23.44■■□□□ 1.34
CTNNA1-226ENST00000521368 KIF27Q86VH2 1401 aa23.42■■□□□ 1.34
CTNNA1-226ENST00000521368 CHD1O14646 1710 aa23.4■■□□□ 1.34
CTNNA1-226ENST00000521368 SYNJ2O15056 1496 aa23.38■■□□□ 1.33
CTNNA1-226ENST00000521368 ADAMTS12P58397 1594 aa23.36■■□□□ 1.33
CTNNA1-226ENST00000521368 OSCARQ8IYS5 282 aa23.34■■□□□ 1.33
CTNNA1-226ENST00000521368 DNAJC5Q9H3Z4 198 aa23.34■■□□□ 1.33
CTNNA1-226ENST00000521368 FHAD1B1AJZ9 1412 aa23.32■■□□□ 1.32
CTNNA1-226ENST00000521368 CHMP7Q8WUX9 453 aaPredicted RBP23.3■■□□□ 1.32
CTNNA1-226ENST00000521368 FBLN2P98095 1184 aa23.29■■□□□ 1.32
CTNNA1-226ENST00000521368 CUL7Q14999 1698 aa23.28■■□□□ 1.32
CTNNA1-226ENST00000521368 IGF1RP08069 1367 aa23.28■■□□□ 1.32
CTNNA1-226ENST00000521368 CHIC1Q5VXU3 224 aa23.28■■□□□ 1.32
CTNNA1-226ENST00000521368 GRIN2AQ12879 1464 aa23.25■■□□□ 1.31
CTNNA1-226ENST00000521368 RUSC2Q8N2Y8 1516 aa23.22■■□□□ 1.31
CTNNA1-226ENST00000521368 CLASP1Q7Z460 1538 aa23.17■■□□□ 1.3
CTNNA1-226ENST00000521368 NUP160Q12769 1436 aa23.15■■□□□ 1.3
CTNNA1-226ENST00000521368 CARMIL1Q5VZK9 1371 aa23.14■■□□□ 1.3
CTNNA1-226ENST00000521368 EEA1Q15075 1411 aa23.14■■□□□ 1.29
CTNNA1-226ENST00000521368 CEP170Q5SW79 1584 aa23.12■■□□□ 1.29
CTNNA1-226ENST00000521368 RAPGEF2Q9Y4G8 1499 aa23.06■■□□□ 1.28
CTNNA1-226ENST00000521368 PRXQ9BXM0 1461 aa23.04■■□□□ 1.28
CTNNA1-226ENST00000521368 ARHGEF11O15085 1522 aa23■■□□□ 1.27
CTNNA1-226ENST00000521368 CSRNP3Q8WYN3 585 aa23■■□□□ 1.27
CTNNA1-226ENST00000521368 RIMBP3CA6NJZ7 1639 aa22.98■■□□□ 1.27
CTNNA1-226ENST00000521368 RIMBP3BA6NNM3 1639 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms