RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 HNRNPMP52272 730 aaKnown RBP eCLIP15.97■□□□□ 0.15
TRIM35-204ENST00000521283 AGLP35573 1532 aa15.97■□□□□ 0.15
TRIM35-204ENST00000521283 KIDINS220Q9ULH0 1771 aa15.97■□□□□ 0.15
TRIM35-204ENST00000521283 SPDYE1Q8NFV5 336 aaPredicted RBP15.96■□□□□ 0.15
TRIM35-204ENST00000521283 MADDQ8WXG6 1647 aa15.96■□□□□ 0.15
TRIM35-204ENST00000521283 RTEL1-TNFRSF6BF6WH68 1400 aa15.94■□□□□ 0.14
TRIM35-204ENST00000521283 ABCA6Q8N139 1617 aa15.94■□□□□ 0.14
TRIM35-204ENST00000521283 CLEC11AQ9Y240 323 aa15.94■□□□□ 0.14
TRIM35-204ENST00000521283 FER1L4A9Z1Z3 1794 aa15.94■□□□□ 0.14
TRIM35-204ENST00000521283 ATP7AQ04656 1500 aa15.94■□□□□ 0.14
TRIM35-204ENST00000521283 MIA2Q96PC5 1412 aa15.94■□□□□ 0.14
TRIM35-204ENST00000521283 RIMS1Q86UR5 1692 aaKnown RBP15.92■□□□□ 0.14
TRIM35-204ENST00000521283 MBD5Q9P267 1494 aa15.92■□□□□ 0.14
TRIM35-204ENST00000521283 INO80Q9ULG1 1556 aaPredicted RBP15.92■□□□□ 0.14
TRIM35-204ENST00000521283 SIGLEC1Q9BZZ2 1709 aa15.91■□□□□ 0.14
TRIM35-204ENST00000521283 ESF1Q9H501 851 aaKnown RBP15.91■□□□□ 0.14
TRIM35-204ENST00000521283 ADGBQ8N7X0 1667 aa15.91■□□□□ 0.14
TRIM35-204ENST00000521283 CAMSAP2Q08AD1 1489 aa15.91■□□□□ 0.14
TRIM35-204ENST00000521283 TSPY4P0CV99 314 aa15.9■□□□□ 0.14
TRIM35-204ENST00000521283 TSPY10P0CW01 314 aa15.9■□□□□ 0.14
TRIM35-204ENST00000521283 MLECQ14165 292 aa15.9■□□□□ 0.14
TRIM35-204ENST00000521283 ARHGEF5Q12774 1597 aa15.9■□□□□ 0.14
TRIM35-204ENST00000521283 CCDC141Q6ZP82 1450 aa15.9■□□□□ 0.14
TRIM35-204ENST00000521283 MYOM3Q5VTT5 1437 aa15.89■□□□□ 0.13
TRIM35-204ENST00000521283 CNTLNQ9NXG0 1405 aa15.89■□□□□ 0.13
TRIM35-204ENST00000521283 ZNF644Q9H582 1327 aaPredicted RBP15.89■□□□□ 0.13
TRIM35-204ENST00000521283 SETD1BQ9UPS6 1966 aaKnown RBP15.88■□□□□ 0.13
TRIM35-204ENST00000521283 KANK4Q5T7N3 995 aaPredicted RBP15.88■□□□□ 0.13
TRIM35-204ENST00000521283 A2MP01023 1474 aa15.87■□□□□ 0.13
TRIM35-204ENST00000521283 PLXNC1O60486 1568 aa15.85■□□□□ 0.13
TRIM35-204ENST00000521283 DHX29Q7Z478 1369 aaKnown RBP15.83■□□□□ 0.12
TRIM35-204ENST00000521283 MROH2AA6NES4 1674 aa15.82■□□□□ 0.12
TRIM35-204ENST00000521283 MAST1Q9Y2H9 1570 aa15.81■□□□□ 0.12
TRIM35-204ENST00000521283 FAM135AQ9P2D6 1515 aa15.8■□□□□ 0.12
TRIM35-204ENST00000521283 PREX1Q8TCU6 1659 aa15.78■□□□□ 0.12
TRIM35-204ENST00000521283 LMTK3Q96Q04 1460 aa15.78■□□□□ 0.12
TRIM35-204ENST00000521283 PTPN23Q9H3S7 1636 aa15.77■□□□□ 0.12
TRIM35-204ENST00000521283 FGD6Q6ZV73 1430 aa15.77■□□□□ 0.11
TRIM35-204ENST00000521283 C3P01024 1663 aa15.76■□□□□ 0.11
TRIM35-204ENST00000521283 PRKAR2AP13861 404 aaKnown RBP15.76■□□□□ 0.11
TRIM35-204ENST00000521283 TCOF1Q13428 1488 aaKnown RBP15.76■□□□□ 0.11
TRIM35-204ENST00000521283 SHANK2Q9UPX8 1470 aa15.76■□□□□ 0.11
TRIM35-204ENST00000521283 NPATQ14207 1427 aa15.76■□□□□ 0.11
TRIM35-204ENST00000521283 SPDYE4A6NLX3 237 aa15.75■□□□□ 0.11
TRIM35-204ENST00000521283 GGT6Q6P531 493 aa15.75■□□□□ 0.11
TRIM35-204ENST00000521283 ZMYM3Q14202 1370 aa15.75■□□□□ 0.11
TRIM35-204ENST00000521283 UHRF1BP1Q6BDS2 1440 aa15.74■□□□□ 0.11
TRIM35-204ENST00000521283 EIF2AK4Q9P2K8 1649 aaKnown RBP15.73■□□□□ 0.11
TRIM35-204ENST00000521283 KIF3BO15066 747 aa15.73■□□□□ 0.11
TRIM35-204ENST00000521283 CEBPAP49715 358 aaPredicted RBP15.72■□□□□ 0.11
TRIM35-204ENST00000521283 CROCC2H7BZ55 1655 aa15.72■□□□□ 0.11
TRIM35-204ENST00000521283 CLTCQ00610 1675 aaKnown RBP15.72■□□□□ 0.11
TRIM35-204ENST00000521283 DUOX2Q9NRD8 1548 aa15.72■□□□□ 0.11
TRIM35-204ENST00000521283 DNMT1P26358 1616 aaKnown RBP15.72■□□□□ 0.11
TRIM35-204ENST00000521283 PRR29P0C7W0 189 aa15.71■□□□□ 0.11
TRIM35-204ENST00000521283 ABCC5O15440 1437 aa15.69■□□□□ 0.1
TRIM35-204ENST00000521283 DAPK1P53355 1430 aa15.69■□□□□ 0.1
TRIM35-204ENST00000521283 HAX1O00165 279 aa15.69■□□□□ 0.1
TRIM35-204ENST00000521283 WASHC2CQ9Y4E1 1318 aa15.68■□□□□ 0.1
TRIM35-204ENST00000521283 KDM5DQ9BY66 1539 aa15.68■□□□□ 0.1
TRIM35-204ENST00000521283 ANKRD30AQ9BXX3 1397 aa15.68■□□□□ 0.1
TRIM35-204ENST00000521283 RNF17Q9BXT8 1623 aaKnown RBP15.68■□□□□ 0.1
TRIM35-204ENST00000521283 ERBINQ96RT1 1412 aa15.68■□□□□ 0.1
TRIM35-204ENST00000521283 ZC3H13Q5T200 1668 aaKnown RBP15.67■□□□□ 0.1
TRIM35-204ENST00000521283 CHADLQ6NUI6 762 aa15.67■□□□□ 0.1
TRIM35-204ENST00000521283 KIF15Q9NS87 1388 aa15.65■□□□□ 0.1
TRIM35-204ENST00000521283 SP7Q8TDD2 431 aaPredicted RBP15.65■□□□□ 0.1
TRIM35-204ENST00000521283 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.64■□□□□ 0.09
TRIM35-204ENST00000521283 PTPRKQ15262 1439 aa15.64■□□□□ 0.09
TRIM35-204ENST00000521283 FAM50AQ14320 339 aaKnown RBP15.63■□□□□ 0.09
TRIM35-204ENST00000521283 NCOA1Q15788 1441 aa15.62■□□□□ 0.09
TRIM35-204ENST00000521283 HSPA2P54652 639 aa15.62■□□□□ 0.09
TRIM35-204ENST00000521283 EVX2Q03828 476 aa15.62■□□□□ 0.09
TRIM35-204ENST00000521283 ADGRL2O95490 1459 aa15.62■□□□□ 0.09
TRIM35-204ENST00000521283 PZPP20742 1482 aa15.62■□□□□ 0.09
TRIM35-204ENST00000521283 RRP7BPQ9NSQ0 103 aa15.61■□□□□ 0.09
TRIM35-204ENST00000521283 KANK1Q14678 1352 aa15.61■□□□□ 0.09
TRIM35-204ENST00000521283 ZNF142P52746 1687 aaPredicted RBP15.6■□□□□ 0.09
TRIM35-204ENST00000521283 MYO3AQ8NEV4 1616 aa15.58■□□□□ 0.09
TRIM35-204ENST00000521283 ABCC3O15438 1527 aa15.58■□□□□ 0.08
TRIM35-204ENST00000521283 PRDM15P57071 1507 aaPredicted RBP15.58■□□□□ 0.08
TRIM35-204ENST00000521283 DEPDC5O75140 1603 aa15.57■□□□□ 0.08
TRIM35-204ENST00000521283 ROCK1Q13464 1354 aa15.57■□□□□ 0.08
TRIM35-204ENST00000521283 TNRQ92752 1358 aa15.57■□□□□ 0.08
TRIM35-204ENST00000521283 CEP170BQ9Y4F5 1589 aaPredicted RBP15.57■□□□□ 0.08
TRIM35-204ENST00000521283 CHIC2Q9UKJ5 165 aa15.56■□□□□ 0.08
TRIM35-204ENST00000521283 PTPRTO14522 1441 aa15.56■□□□□ 0.08
TRIM35-204ENST00000521283 ARHGAP31Q2M1Z3 1444 aa15.56■□□□□ 0.08
TRIM35-204ENST00000521283 A2ML1A8K2U0 1454 aa15.56■□□□□ 0.08
TRIM35-204ENST00000521283 PLA2R1Q13018 1463 aa15.56■□□□□ 0.08
TRIM35-204ENST00000521283 NLRP1Q9C000 1473 aa15.56■□□□□ 0.08
TRIM35-204ENST00000521283 STRCQ7RTU9 1775 aa15.56■□□□□ 0.08
TRIM35-204ENST00000521283 MROH1Q8NDA8 1641 aa15.55■□□□□ 0.08
TRIM35-204ENST00000521283 PKD2Q13563 968 aa15.55■□□□□ 0.08
TRIM35-204ENST00000521283 CAMSAP1Q5T5Y3 1602 aa15.54■□□□□ 0.08
TRIM35-204ENST00000521283 ANKRD50Q9ULJ7 1429 aa15.53■□□□□ 0.08
TRIM35-204ENST00000521283 THEMISQ8N1K5 641 aaPredicted RBP15.53■□□□□ 0.08
TRIM35-204ENST00000521283 SPATA31D1Q6ZQQ2 1576 aa15.53■□□□□ 0.08
TRIM35-204ENST00000521283 CEP152O94986 1710 aa15.52■□□□□ 0.08
TRIM35-204ENST00000521283 LMTK2Q8IWU2 1503 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms