RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 PRDM15P57071 1507 aaPredicted RBP9.58□□□□□ -0.88
IGHV4-55-201ENST00000520889 KDM5DQ9BY66 1539 aa9.58□□□□□ -0.88
IGHV4-55-201ENST00000520889 CHIC2Q9UKJ5 165 aa9.58□□□□□ -0.88
IGHV4-55-201ENST00000520889 UNC13BO14795 1591 aa9.58□□□□□ -0.88
IGHV4-55-201ENST00000520889 ADAMTSL3P82987 1691 aa9.58□□□□□ -0.88
IGHV4-55-201ENST00000520889 RRP7BPQ9NSQ0 103 aa9.57□□□□□ -0.88
IGHV4-55-201ENST00000520889 MROH2AA6NES4 1674 aa9.57□□□□□ -0.88
IGHV4-55-201ENST00000520889 MROH1Q8NDA8 1641 aa9.56□□□□□ -0.88
IGHV4-55-201ENST00000520889 VWDEQ8N2E2 1590 aa9.56□□□□□ -0.88
IGHV4-55-201ENST00000520889 ITGAEP38570 1179 aa9.56□□□□□ -0.88
IGHV4-55-201ENST00000520889 SETD5Q9C0A6 1442 aa9.56□□□□□ -0.88
IGHV4-55-201ENST00000520889 CNTLNQ9NXG0 1405 aa9.56□□□□□ -0.88
IGHV4-55-201ENST00000520889 FER1L4A9Z1Z3 1794 aa9.55□□□□□ -0.88
IGHV4-55-201ENST00000520889 LMTK2Q8IWU2 1503 aa9.55□□□□□ -0.88
IGHV4-55-201ENST00000520889 IQGAP3Q86VI3 1631 aa9.54□□□□□ -0.88
IGHV4-55-201ENST00000520889 KIF3BO15066 747 aa9.54□□□□□ -0.88
IGHV4-55-201ENST00000520889 KANK1Q14678 1352 aa9.53□□□□□ -0.88
IGHV4-55-201ENST00000520889 ARID4BQ4LE39 1312 aaPredicted RBP9.53□□□□□ -0.88
IGHV4-55-201ENST00000520889 TET3O43151 1660 aa9.51□□□□□ -0.89
IGHV4-55-201ENST00000520889 ARHGAP31Q2M1Z3 1444 aa9.51□□□□□ -0.89
IGHV4-55-201ENST00000520889 MADDQ8WXG6 1647 aa9.51□□□□□ -0.89
IGHV4-55-201ENST00000520889 CLTCQ00610 1675 aaKnown RBP9.51□□□□□ -0.89
IGHV4-55-201ENST00000520889 ABCC3O15438 1527 aa9.51□□□□□ -0.89
IGHV4-55-201ENST00000520889 CEP152O94986 1710 aa9.51□□□□□ -0.89
IGHV4-55-201ENST00000520889 SETD1BQ9UPS6 1966 aaKnown RBP9.5□□□□□ -0.89
IGHV4-55-201ENST00000520889 CAMSAP1Q5T5Y3 1602 aa9.5□□□□□ -0.89
IGHV4-55-201ENST00000520889 RPRD2Q5VT52 1461 aaKnown RBP9.5□□□□□ -0.89
IGHV4-55-201ENST00000520889 RAB3GAP2Q9H2M9 1393 aa9.5□□□□□ -0.89
IGHV4-55-201ENST00000520889 GGT6Q6P531 493 aa9.49□□□□□ -0.89
IGHV4-55-201ENST00000520889 RIMS1Q86UR5 1692 aaKnown RBP9.48□□□□□ -0.89
IGHV4-55-201ENST00000520889 EFCAB6Q5THR3 1501 aa9.48□□□□□ -0.89
IGHV4-55-201ENST00000520889 ESF1Q9H501 851 aaKnown RBP9.48□□□□□ -0.89
IGHV4-55-201ENST00000520889 WASHC2CQ9Y4E1 1318 aa9.48□□□□□ -0.89
IGHV4-55-201ENST00000520889 C3P01024 1663 aa9.48□□□□□ -0.89
IGHV4-55-201ENST00000520889 PZPP20742 1482 aa9.47□□□□□ -0.89
IGHV4-55-201ENST00000520889 NUP155O75694 1391 aa9.47□□□□□ -0.89
IGHV4-55-201ENST00000520889 ZMYM3Q14202 1370 aa9.47□□□□□ -0.89
IGHV4-55-201ENST00000520889 NPATQ14207 1427 aa9.47□□□□□ -0.89
IGHV4-55-201ENST00000520889 E9PCH4 1651 aa9.46□□□□□ -0.89
IGHV4-55-201ENST00000520889 PTPRMP28827 1452 aa9.46□□□□□ -0.9
IGHV4-55-201ENST00000520889 SPATA31D1Q6ZQQ2 1576 aa9.46□□□□□ -0.9
IGHV4-55-201ENST00000520889 MLECQ14165 292 aa9.45□□□□□ -0.9
IGHV4-55-201ENST00000520889 PREX1Q8TCU6 1659 aa9.45□□□□□ -0.9
IGHV4-55-201ENST00000520889 KDM4FA0A1W2PPD8 638 aa9.44□□□□□ -0.9
IGHV4-55-201ENST00000520889 SPHKAPQ2M3C7 1700 aa9.43□□□□□ -0.9
IGHV4-55-201ENST00000520889 KDM5AP29375 1690 aaKnown RBP9.43□□□□□ -0.9
IGHV4-55-201ENST00000520889 NOS1P29475 1434 aa9.43□□□□□ -0.9
IGHV4-55-201ENST00000520889 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.43□□□□□ -0.9
IGHV4-55-201ENST00000520889 CFAP65Q6ZU64 1925 aaKnown RBP9.43□□□□□ -0.9
IGHV4-55-201ENST00000520889 PTPRTO14522 1441 aa9.42□□□□□ -0.9
IGHV4-55-201ENST00000520889 TRIM52Q96A61 297 aa9.42□□□□□ -0.9
IGHV4-55-201ENST00000520889 MPHOSPH9Q99550 1183 aa9.42□□□□□ -0.9
IGHV4-55-201ENST00000520889 PCGF6Q9BYE7 350 aa9.42□□□□□ -0.9
IGHV4-55-201ENST00000520889 ERVK-7P63135 1459 aa9.41□□□□□ -0.9
IGHV4-55-201ENST00000520889 SLC4A1APQ9BWU0 796 aaKnown RBP9.41□□□□□ -0.9
IGHV4-55-201ENST00000520889 ZNF142P52746 1687 aaPredicted RBP9.41□□□□□ -0.9
IGHV4-55-201ENST00000520889 PIK3C2BO00750 1634 aa9.41□□□□□ -0.9
IGHV4-55-201ENST00000520889 NLRP1Q9C000 1473 aa9.4□□□□□ -0.9
IGHV4-55-201ENST00000520889 NEURL4Q96JN8 1562 aa9.4□□□□□ -0.9
IGHV4-55-201ENST00000520889 TRPM2O94759 1503 aa9.4□□□□□ -0.91
IGHV4-55-201ENST00000520889 SLC52A1Q9NWF4 448 aa9.39□□□□□ -0.91
IGHV4-55-201ENST00000520889 MYO3AQ8NEV4 1616 aa9.38□□□□□ -0.91
IGHV4-55-201ENST00000520889 SYNMO15061 1565 aa9.38□□□□□ -0.91
IGHV4-55-201ENST00000520889 PKD2Q13563 968 aa9.38□□□□□ -0.91
IGHV4-55-201ENST00000520889 KIF1BO60333 1816 aa9.38□□□□□ -0.91
IGHV4-55-201ENST00000520889 TNRQ92752 1358 aa9.37□□□□□ -0.91
IGHV4-55-201ENST00000520889 DHX57Q6P158 1386 aaKnown RBP9.37□□□□□ -0.91
IGHV4-55-201ENST00000520889 CLSPNQ9HAW4 1339 aa9.36□□□□□ -0.91
IGHV4-55-201ENST00000520889 A2ML1A8K2U0 1454 aa9.36□□□□□ -0.91
IGHV4-55-201ENST00000520889 PLA2R1Q13018 1463 aa9.35□□□□□ -0.91
IGHV4-55-201ENST00000520889 CEBPAP49715 358 aaPredicted RBP9.35□□□□□ -0.91
IGHV4-55-201ENST00000520889 UHRF1BP1Q6BDS2 1440 aa9.35□□□□□ -0.91
IGHV4-55-201ENST00000520889 UBR1Q8IWV7 1749 aa9.35□□□□□ -0.91
IGHV4-55-201ENST00000520889 CEP170BQ9Y4F5 1589 aaPredicted RBP9.35□□□□□ -0.91
IGHV4-55-201ENST00000520889 ANKRD30BQ9BXX2 1392 aa9.35□□□□□ -0.91
IGHV4-55-201ENST00000520889 CLTCL1P53675 1640 aa9.34□□□□□ -0.91
IGHV4-55-201ENST00000520889 FBXO31Q5XUX0 539 aaPredicted RBP9.34□□□□□ -0.91
IGHV4-55-201ENST00000520889 TMEM131LA2VDJ0 1609 aa9.34□□□□□ -0.91
IGHV4-55-201ENST00000520889 CCDC144AA2RUR9 1427 aa9.33□□□□□ -0.92
IGHV4-55-201ENST00000520889 ADGRB3O60242 1522 aa9.33□□□□□ -0.92
IGHV4-55-201ENST00000520889 UGGT1Q9NYU2 1555 aa9.33□□□□□ -0.92
IGHV4-55-201ENST00000520889 SLIT1O75093 1534 aa9.31□□□□□ -0.92
IGHV4-55-201ENST00000520889 MYO5BQ9ULV0 1848 aa9.31□□□□□ -0.92
IGHV4-55-201ENST00000520889 IDI1Q13907 227 aa9.31□□□□□ -0.92
IGHV4-55-201ENST00000520889 THEMISQ8N1K5 641 aaPredicted RBP9.31□□□□□ -0.92
IGHV4-55-201ENST00000520889 LMTK3Q96Q04 1460 aa9.31□□□□□ -0.92
IGHV4-55-201ENST00000520889 ARHGAP23Q9P227 1491 aa9.3□□□□□ -0.92
IGHV4-55-201ENST00000520889 FOXD1Q16676 465 aa9.3□□□□□ -0.92
IGHV4-55-201ENST00000520889 STAC3Q96MF2 364 aa9.3□□□□□ -0.92
IGHV4-55-201ENST00000520889 SPATA31E1Q6ZUB1 1445 aa9.3□□□□□ -0.92
IGHV4-55-201ENST00000520889 RPGRIP1LQ68CZ1 1315 aa9.3□□□□□ -0.92
IGHV4-55-201ENST00000520889 IFT172Q9UG01 1749 aa9.29□□□□□ -0.92
IGHV4-55-201ENST00000520889 HDGFP51858 240 aaKnown RBP9.29□□□□□ -0.92
IGHV4-55-201ENST00000520889 PPLO60437 1756 aa9.29□□□□□ -0.92
IGHV4-55-201ENST00000520889 POLR1AO95602 1720 aaPredicted RBP9.28□□□□□ -0.92
IGHV4-55-201ENST00000520889 ZFYVE9O95405 1425 aa9.28□□□□□ -0.92
IGHV4-55-201ENST00000520889 TMEM2Q9UHN6 1383 aa9.27□□□□□ -0.93
IGHV4-55-201ENST00000520889 TIMELESSQ9UNS1 1208 aa9.27□□□□□ -0.93
IGHV4-55-201ENST00000520889 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.26□□□□□ -0.93
IGHV4-55-201ENST00000520889 STAG3Q9UJ98 1225 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms