RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 ZMYM3Q14202 1370 aa24.92■■□□□ 1.58
TNPO1-212ENST00000520850 SETD1BQ9UPS6 1966 aaKnown RBP24.91■■□□□ 1.58
TNPO1-212ENST00000520850 ROCK1Q13464 1354 aa24.9■■□□□ 1.58
TNPO1-212ENST00000520850 CHIC2Q9UKJ5 165 aa24.89■■□□□ 1.58
TNPO1-212ENST00000520850 RNF17Q9BXT8 1623 aaKnown RBP24.88■■□□□ 1.57
TNPO1-212ENST00000520850 CEBPAP49715 358 aaPredicted RBP24.88■■□□□ 1.57
TNPO1-212ENST00000520850 PTPRKQ15262 1439 aa24.86■■□□□ 1.57
TNPO1-212ENST00000520850 C3P01024 1663 aa24.86■■□□□ 1.57
TNPO1-212ENST00000520850 NPATQ14207 1427 aa24.86■■□□□ 1.57
TNPO1-212ENST00000520850 WASHC2CQ9Y4E1 1318 aa24.85■■□□□ 1.57
TNPO1-212ENST00000520850 KDM5DQ9BY66 1539 aa24.83■■□□□ 1.57
TNPO1-212ENST00000520850 CLTCQ00610 1675 aaKnown RBP24.82■■□□□ 1.56
TNPO1-212ENST00000520850 ANKRD50Q9ULJ7 1429 aa24.79■■□□□ 1.56
TNPO1-212ENST00000520850 LMTK3Q96Q04 1460 aa24.79■■□□□ 1.56
TNPO1-212ENST00000520850 MROH1Q8NDA8 1641 aa24.78■■□□□ 1.56
TNPO1-212ENST00000520850 DEPDC5O75140 1603 aa24.77■■□□□ 1.56
TNPO1-212ENST00000520850 PLPPR3Q6T4P5 718 aa24.77■■□□□ 1.56
TNPO1-212ENST00000520850 ZC3H13Q5T200 1668 aaKnown RBP24.77■■□□□ 1.56
TNPO1-212ENST00000520850 PRDM15P57071 1507 aaPredicted RBP24.76■■□□□ 1.55
TNPO1-212ENST00000520850 PREX1Q8TCU6 1659 aa24.75■■□□□ 1.55
TNPO1-212ENST00000520850 PZPP20742 1482 aa24.75■■□□□ 1.55
TNPO1-212ENST00000520850 ABCC3O15438 1527 aa24.74■■□□□ 1.55
TNPO1-212ENST00000520850 UHRF1BP1Q6BDS2 1440 aa24.73■■□□□ 1.55
TNPO1-212ENST00000520850 KANK1Q14678 1352 aa24.73■■□□□ 1.55
TNPO1-212ENST00000520850 ARHGAP31Q2M1Z3 1444 aa24.71■■□□□ 1.55
TNPO1-212ENST00000520850 ITGAEP38570 1179 aa24.71■■□□□ 1.55
TNPO1-212ENST00000520850 VWDEQ8N2E2 1590 aa24.71■■□□□ 1.55
TNPO1-212ENST00000520850 LMTK2Q8IWU2 1503 aa24.7■■□□□ 1.54
TNPO1-212ENST00000520850 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.66■■□□□ 1.542e-11■■□□□ 12.8
TNPO1-212ENST00000520850 FBXO31Q5XUX0 539 aaPredicted RBP24.65■■□□□ 1.54
TNPO1-212ENST00000520850 TNRQ92752 1358 aa24.63■■□□□ 1.53
TNPO1-212ENST00000520850 CAMSAP1Q5T5Y3 1602 aa24.62■■□□□ 1.53
TNPO1-212ENST00000520850 CEP152O94986 1710 aa24.61■■□□□ 1.53
TNPO1-212ENST00000520850 HSPA2P54652 639 aa24.61■■□□□ 1.53
TNPO1-212ENST00000520850 SPATA31D1Q6ZQQ2 1576 aa24.61■■□□□ 1.53
TNPO1-212ENST00000520850 NAIPQ13075 1403 aa24.61■■□□□ 1.53
TNPO1-212ENST00000520850 UNC13BO14795 1591 aa24.6■■□□□ 1.53
TNPO1-212ENST00000520850 HFM1A2PYH4 1435 aa24.6■■□□□ 1.53
TNPO1-212ENST00000520850 NLRP1Q9C000 1473 aa24.58■■□□□ 1.53
TNPO1-212ENST00000520850 ZNF142P52746 1687 aaPredicted RBP24.58■■□□□ 1.53
TNPO1-212ENST00000520850 A2ML1A8K2U0 1454 aa24.58■■□□□ 1.52
TNPO1-212ENST00000520850 ERVK-7P63135 1459 aa24.58■■□□□ 1.52
TNPO1-212ENST00000520850 RPRD2Q5VT52 1461 aaKnown RBP24.57■■□□□ 1.52
TNPO1-212ENST00000520850 MYO3AQ8NEV4 1616 aa24.57■■□□□ 1.52
TNPO1-212ENST00000520850 CEP170BQ9Y4F5 1589 aaPredicted RBP24.55■■□□□ 1.52
TNPO1-212ENST00000520850 DMRT2Q9Y5R5 561 aa24.54■■□□□ 1.52
TNPO1-212ENST00000520850 EFCAB6Q5THR3 1501 aa24.53■■□□□ 1.52
TNPO1-212ENST00000520850 ACIN1Q9UKV3 1341 aaKnown RBP24.53■■□□□ 1.52
TNPO1-212ENST00000520850 NUP155O75694 1391 aa24.53■■□□□ 1.52
TNPO1-212ENST00000520850 GCC2Q8IWJ2 1684 aa24.52■■□□□ 1.52
TNPO1-212ENST00000520850 PLA2R1Q13018 1463 aa24.51■■□□□ 1.51
TNPO1-212ENST00000520850 IQGAP3Q86VI3 1631 aa24.51■■□□□ 1.51
TNPO1-212ENST00000520850 TET3O43151 1660 aa24.51■■□□□ 1.51
TNPO1-212ENST00000520850 THEMISQ8N1K5 641 aaPredicted RBP24.51■■□□□ 1.51
TNPO1-212ENST00000520850 NOS1P29475 1434 aa24.51■■□□□ 1.51
TNPO1-212ENST00000520850 PKD2Q13563 968 aa24.49■■□□□ 1.51
TNPO1-212ENST00000520850 SLC52A1Q9NWF4 448 aa24.48■■□□□ 1.51
TNPO1-212ENST00000520850 CFAP65Q6ZU64 1925 aaKnown RBP24.47■■□□□ 1.51
TNPO1-212ENST00000520850 STRCQ7RTU9 1775 aa24.47■■□□□ 1.51
TNPO1-212ENST00000520850 PTPRTO14522 1441 aa24.44■■□□□ 1.5
TNPO1-212ENST00000520850 UGGT1Q9NYU2 1555 aa24.44■■□□□ 1.5
TNPO1-212ENST00000520850 IDI1Q13907 227 aa24.41■■□□□ 1.5
TNPO1-212ENST00000520850 KDM5AP29375 1690 aaKnown RBP24.4■■□□□ 1.5
TNPO1-212ENST00000520850 E9PCH4 1651 aa24.38■■□□□ 1.49
TNPO1-212ENST00000520850 ANKLE2Q86XL3 938 aa24.38■■□□□ 1.49
TNPO1-212ENST00000520850 SYNMO15061 1565 aa24.37■■□□□ 1.49
TNPO1-212ENST00000520850 SETD5Q9C0A6 1442 aa24.36■■□□□ 1.49
TNPO1-212ENST00000520850 HRCP23327 699 aa24.36■■□□□ 1.49
TNPO1-212ENST00000520850 UBR1Q8IWV7 1749 aa24.35■■□□□ 1.49
TNPO1-212ENST00000520850 NCKAP5LQ9HCH0 1330 aa24.35■■□□□ 1.49
TNPO1-212ENST00000520850 TRIM52Q96A61 297 aa24.34■■□□□ 1.49
TNPO1-212ENST00000520850 MED14O60244 1454 aa24.32■■□□□ 1.48
TNPO1-212ENST00000520850 ARHGAP23Q9P227 1491 aa24.32■■□□□ 1.48
TNPO1-212ENST00000520850 SLIT1O75093 1534 aa24.32■■□□□ 1.48
TNPO1-212ENST00000520850 PIK3C2BO00750 1634 aa24.32■■□□□ 1.48
TNPO1-212ENST00000520850 STAG3Q9UJ98 1225 aa24.3■■□□□ 1.48
TNPO1-212ENST00000520850 SLC4A1APQ9BWU0 796 aaKnown RBP24.29■■□□□ 1.48
TNPO1-212ENST00000520850 TMEM2Q9UHN6 1383 aa24.29■■□□□ 1.48
TNPO1-212ENST00000520850 POLR1AO95602 1720 aaPredicted RBP24.27■■□□□ 1.48
TNPO1-212ENST00000520850 ADGRB3O60242 1522 aa24.25■■□□□ 1.47
TNPO1-212ENST00000520850 EID1Q9Y6B2 187 aa24.25■■□□□ 1.47
TNPO1-212ENST00000520850 NEURL4Q96JN8 1562 aa24.25■■□□□ 1.47
TNPO1-212ENST00000520850 HDGFP51858 240 aaKnown RBP24.24■■□□□ 1.47
TNPO1-212ENST00000520850 TXNDC2Q86VQ3 553 aa24.24■■□□□ 1.47
TNPO1-212ENST00000520850 MPHOSPH9Q99550 1183 aa24.24■■□□□ 1.47
TNPO1-212ENST00000520850 LTKP29376 864 aa24.23■■□□□ 1.47
TNPO1-212ENST00000520850 RAB3GAP2Q9H2M9 1393 aa24.23■■□□□ 1.47
TNPO1-212ENST00000520850 SPHKAPQ2M3C7 1700 aa24.23■■□□□ 1.47
TNPO1-212ENST00000520850 TMEM131LA2VDJ0 1609 aa24.22■■□□□ 1.47
TNPO1-212ENST00000520850 SCAF11Q99590 1463 aaKnown RBP24.22■■□□□ 1.47
TNPO1-212ENST00000520850 NPHP4O75161 1426 aaPredicted RBP24.22■■□□□ 1.47
TNPO1-212ENST00000520850 TRPM2O94759 1503 aa24.2■■□□□ 1.46
TNPO1-212ENST00000520850 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.17■■□□□ 1.46
TNPO1-212ENST00000520850 ZFYVE9O95405 1425 aa24.16■■□□□ 1.46
TNPO1-212ENST00000520850 IQGAP1P46940 1657 aa24.15■■□□□ 1.46
TNPO1-212ENST00000520850 LTBP4Q8N2S1 1624 aa24.14■■□□□ 1.46
TNPO1-212ENST00000520850 CERKQ8TCT0 537 aa24.14■■□□□ 1.45
TNPO1-212ENST00000520850 RIMS2Q9UQ26 1411 aa24.11■■□□□ 1.45
TNPO1-212ENST00000520850 CHGAP10645 457 aaKnown RBP24.11■■□□□ 1.45
TNPO1-212ENST00000520850 MYO5BQ9ULV0 1848 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms