RNA–Protein interactions for RNA: ENST00000520158.5

CTNNA1-219, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 719 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-219ENST00000520158 SUPT6HQ7KZ85 1726 aaKnown RBP9.05□□□□□ -0.96
CTNNA1-219ENST00000520158 DHX29Q7Z478 1369 aaKnown RBP9.05□□□□□ -0.96
CTNNA1-219ENST00000520158 KCNA4P22459 653 aa9.05□□□□□ -0.96
CTNNA1-219ENST00000520158 CAPN15O75808 1086 aa9.04□□□□□ -0.96
CTNNA1-219ENST00000520158 U3KPZ7 1027 aaPredicted RBP9.04□□□□□ -0.96
CTNNA1-219ENST00000520158 MAP3K1Q13233 1512 aa9.04□□□□□ -0.96
CTNNA1-219ENST00000520158 PTPRKQ15262 1439 aa9.04□□□□□ -0.96
CTNNA1-219ENST00000520158 NCOA1Q15788 1441 aa9.04□□□□□ -0.96
CTNNA1-219ENST00000520158 NCOA2Q15596 1464 aa9.02□□□□□ -0.96
CTNNA1-219ENST00000520158 FAM135AQ9P2D6 1515 aa9.02□□□□□ -0.97
CTNNA1-219ENST00000520158 CLTCQ00610 1675 aaKnown RBP9.02□□□□□ -0.97
CTNNA1-219ENST00000520158 PLA2R1Q13018 1463 aa9.02□□□□□ -0.97
CTNNA1-219ENST00000520158 IQSEC2Q5JU85 1478 aa9.02□□□□□ -0.97
CTNNA1-219ENST00000520158 ZNF142P52746 1687 aaPredicted RBP9.01□□□□□ -0.97
CTNNA1-219ENST00000520158 ARHGEF5Q12774 1597 aa9.01□□□□□ -0.97
CTNNA1-219ENST00000520158 GGT6Q6P531 493 aa9.01□□□□□ -0.97
CTNNA1-219ENST00000520158 VPS8Q8N3P4 1428 aa9.01□□□□□ -0.97
CTNNA1-219ENST00000520158 LTBP4Q8N2S1 1624 aa9.01□□□□□ -0.97
CTNNA1-219ENST00000520158 CCDC141Q6ZP82 1450 aa9.01□□□□□ -0.97
CTNNA1-219ENST00000520158 PKD2Q13563 968 aa9□□□□□ -0.97
CTNNA1-219ENST00000520158 CAMSAP1Q5T5Y3 1602 aa9□□□□□ -0.97
CTNNA1-219ENST00000520158 CAMSAP2Q08AD1 1489 aa9□□□□□ -0.97
CTNNA1-219ENST00000520158 LRRC9Q6ZRR7 1453 aa9□□□□□ -0.97
CTNNA1-219ENST00000520158 TCOF1Q13428 1488 aaKnown RBP8.99□□□□□ -0.97
CTNNA1-219ENST00000520158 MYO3AQ8NEV4 1616 aa8.98□□□□□ -0.97
CTNNA1-219ENST00000520158 MIA2Q96PC5 1412 aa8.98□□□□□ -0.97
CTNNA1-219ENST00000520158 LOC105371045A0A1W2PR82 267 aa8.98□□□□□ -0.97
CTNNA1-219ENST00000520158 TSPY4P0CV99 314 aa8.98□□□□□ -0.97
CTNNA1-219ENST00000520158 TSPY10P0CW01 314 aa8.98□□□□□ -0.97
CTNNA1-219ENST00000520158 MAST1Q9Y2H9 1570 aa8.98□□□□□ -0.97
CTNNA1-219ENST00000520158 CEP170BQ9Y4F5 1589 aaPredicted RBP8.98□□□□□ -0.97
CTNNA1-219ENST00000520158 A2ML1A8K2U0 1454 aa8.97□□□□□ -0.97
CTNNA1-219ENST00000520158 KIF3BO15066 747 aa8.97□□□□□ -0.97
CTNNA1-219ENST00000520158 PZPP20742 1482 aa8.96□□□□□ -0.97
CTNNA1-219ENST00000520158 DNMT1P26358 1616 aaKnown RBP8.96□□□□□ -0.98
CTNNA1-219ENST00000520158 KANK4Q5T7N3 995 aaPredicted RBP8.96□□□□□ -0.98
CTNNA1-219ENST00000520158 NCKAP5LQ9HCH0 1330 aa8.96□□□□□ -0.98
CTNNA1-219ENST00000520158 KDM5DQ9BY66 1539 aa8.95□□□□□ -0.98
CTNNA1-219ENST00000520158 WASHC2CQ9Y4E1 1318 aa8.95□□□□□ -0.98
CTNNA1-219ENST00000520158 MYOM3Q5VTT5 1437 aa8.95□□□□□ -0.98
CTNNA1-219ENST00000520158 FBXO31Q5XUX0 539 aaPredicted RBP8.94□□□□□ -0.98
CTNNA1-219ENST00000520158 TNRQ92752 1358 aa8.94□□□□□ -0.98
CTNNA1-219ENST00000520158 RNF17Q9BXT8 1623 aaKnown RBP8.94□□□□□ -0.98
CTNNA1-219ENST00000520158 NLRP1Q9C000 1473 aa8.93□□□□□ -0.98
CTNNA1-219ENST00000520158 EIF2AK4Q9P2K8 1649 aaKnown RBP8.93□□□□□ -0.98
CTNNA1-219ENST00000520158 ZNF335Q9H4Z2 1342 aaPredicted RBP8.92□□□□□ -0.98
CTNNA1-219ENST00000520158 THEMISQ8N1K5 641 aaPredicted RBP8.92□□□□□ -0.98
CTNNA1-219ENST00000520158 SP7Q8TDD2 431 aaPredicted RBP8.92□□□□□ -0.98
CTNNA1-219ENST00000520158 ZC3H13Q5T200 1668 aaKnown RBP8.91□□□□□ -0.98
CTNNA1-219ENST00000520158 MED14O60244 1454 aa8.91□□□□□ -0.98
CTNNA1-219ENST00000520158 DEPDC5O75140 1603 aa8.91□□□□□ -0.98
CTNNA1-219ENST00000520158 SPATA31D1Q6ZQQ2 1576 aa8.9□□□□□ -0.98
CTNNA1-219ENST00000520158 ANKLE2Q86XL3 938 aa8.9□□□□□ -0.98
CTNNA1-219ENST00000520158 MROH1Q8NDA8 1641 aa8.9□□□□□ -0.99
CTNNA1-219ENST00000520158 NEURL4Q96JN8 1562 aa8.9□□□□□ -0.99
CTNNA1-219ENST00000520158 ABCC3O15438 1527 aa8.9□□□□□ -0.99
CTNNA1-219ENST00000520158 DUOX2Q9NRD8 1548 aa8.9□□□□□ -0.99
CTNNA1-219ENST00000520158 SHANK2Q9UPX8 1470 aa8.89□□□□□ -0.99
CTNNA1-219ENST00000520158 ARHGAP31Q2M1Z3 1444 aa8.89□□□□□ -0.99
CTNNA1-219ENST00000520158 POLR1AO95602 1720 aaPredicted RBP8.89□□□□□ -0.99
CTNNA1-219ENST00000520158 UGGT1Q9NYU2 1555 aa8.89□□□□□ -0.99
CTNNA1-219ENST00000520158 ABCC5O15440 1437 aa8.88□□□□□ -0.99
CTNNA1-219ENST00000520158 CHRDL2Q6WN34 429 aa8.88□□□□□ -0.99
CTNNA1-219ENST00000520158 CPS1P31327 1500 aa8.88□□□□□ -0.99
CTNNA1-219ENST00000520158 ERBINQ96RT1 1412 aa8.88□□□□□ -0.99
CTNNA1-219ENST00000520158 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.87□□□□□ -0.99
CTNNA1-219ENST00000520158 ERVK-7P63135 1459 aa8.87□□□□□ -0.99
CTNNA1-219ENST00000520158 CROCC2H7BZ55 1655 aa8.87□□□□□ -0.99
CTNNA1-219ENST00000520158 PTPN23Q9H3S7 1636 aa8.87□□□□□ -0.99
CTNNA1-219ENST00000520158 PRDM15P57071 1507 aaPredicted RBP8.86□□□□□ -0.99
CTNNA1-219ENST00000520158 APLP2Q06481 763 aa8.86□□□□□ -0.99
CTNNA1-219ENST00000520158 NCBP3Q53F19 620 aaKnown RBP8.86□□□□□ -0.99
CTNNA1-219ENST00000520158 NPHP4O75161 1426 aaPredicted RBP8.86□□□□□ -0.99
CTNNA1-219ENST00000520158 VWDEQ8N2E2 1590 aa8.86□□□□□ -0.99
CTNNA1-219ENST00000520158 KIF15Q9NS87 1388 aa8.86□□□□□ -0.99
CTNNA1-219ENST00000520158 UBAP1LF5GYI3 381 aa8.85□□□□□ -0.99
CTNNA1-219ENST00000520158 DAPK1P53355 1430 aa8.85□□□□□ -0.99
CTNNA1-219ENST00000520158 FGD6Q6ZV73 1430 aa8.85□□□□□ -0.99
CTNNA1-219ENST00000520158 ARHGAP23Q9P227 1491 aa8.84□□□□□ -0.99
CTNNA1-219ENST00000520158 DAXXQ9UER7 740 aaPredicted RBP8.84□□□□□ -0.99
CTNNA1-219ENST00000520158 SLIT1O75093 1534 aa8.84□□□□□ -0.99
CTNNA1-219ENST00000520158 LMTK2Q8IWU2 1503 aa8.84□□□□□ -0.99
CTNNA1-219ENST00000520158 CEP152O94986 1710 aa8.83□□□□□ -1
CTNNA1-219ENST00000520158 UBR1Q8IWV7 1749 aa8.83□□□□□ -1
CTNNA1-219ENST00000520158 TOM1O60784 492 aa8.83□□□□□ -1
CTNNA1-219ENST00000520158 RRP7BPQ9NSQ0 103 aa8.83□□□□□ -1
CTNNA1-219ENST00000520158 KDM5AP29375 1690 aaKnown RBP8.83□□□□□ -1
CTNNA1-219ENST00000520158 IQGAP1P46940 1657 aa8.83□□□□□ -1
CTNNA1-219ENST00000520158 ANKRD30AQ9BXX3 1397 aa8.83□□□□□ -1
CTNNA1-219ENST00000520158 DISP3Q9P2K9 1392 aa8.83□□□□□ -1
CTNNA1-219ENST00000520158 ADGRL2O95490 1459 aa8.83□□□□□ -1
CTNNA1-219ENST00000520158 CFAP65Q6ZU64 1925 aaKnown RBP8.82□□□□□ -1
CTNNA1-219ENST00000520158 ILDR2Q71H61 639 aa8.81□□□□□ -1
CTNNA1-219ENST00000520158 KANK1Q14678 1352 aa8.81□□□□□ -1
CTNNA1-219ENST00000520158 ALKQ9UM73 1620 aa8.8□□□□□ -1
CTNNA1-219ENST00000520158 PRKCSHP14314 528 aaPredicted RBP8.8□□□□□ -1
CTNNA1-219ENST00000520158 LTKP29376 864 aa8.8□□□□□ -1
CTNNA1-219ENST00000520158 SCAF11Q99590 1463 aaKnown RBP8.8□□□□□ -1
CTNNA1-219ENST00000520158 STRCP1A6NGW2 1772 aa8.8□□□□□ -1
CTNNA1-219ENST00000520158 LRRC7Q96NW7 1537 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms