RNA–Protein interactions for RNA: ENST00000517730.5

PCM1-204, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-204ENST00000517730 DNAJC5BQ9UF47 199 aa20.04■□□□□ 0.8
PCM1-204ENST00000517730 RAPGEF6Q8TEU7 1601 aa20.03■□□□□ 0.8
PCM1-204ENST00000517730 CFDP1Q9UEE9 299 aaPredicted RBP20.03■□□□□ 0.8
PCM1-204ENST00000517730 PLEKHH2Q8IVE3 1493 aa20.03■□□□□ 0.8
PCM1-204ENST00000517730 TROQ12816 1431 aaPredicted RBP20.02■□□□□ 0.8
PCM1-204ENST00000517730 ANKRD50Q9ULJ7 1429 aa20.02■□□□□ 0.8
PCM1-204ENST00000517730 KIAA0556O60303 1618 aa20.02■□□□□ 0.79
PCM1-204ENST00000517730 BLMP54132 1417 aaPredicted RBP20.01■□□□□ 0.79
PCM1-204ENST00000517730 NFKBIBQ15653 356 aa20■□□□□ 0.79
PCM1-204ENST00000517730 KDM5DQ9BY66 1539 aa19.99■□□□□ 0.79
PCM1-204ENST00000517730 CRBNQ96SW2 442 aa19.99■□□□□ 0.79
PCM1-204ENST00000517730 DAXXQ9UER7 740 aaPredicted RBP19.99■□□□□ 0.79
PCM1-204ENST00000517730 KIAA0586Q9BVV6 1533 aa19.99■□□□□ 0.79
PCM1-204ENST00000517730 GPATCH8Q9UKJ3 1502 aaKnown RBP19.99■□□□□ 0.79
PCM1-204ENST00000517730 CDCA7LQ96GN5 454 aa19.98■□□□□ 0.79
PCM1-204ENST00000517730 DISP1Q96F81 1524 aa19.97■□□□□ 0.79
PCM1-204ENST00000517730 CEP170Q5SW79 1584 aa19.97■□□□□ 0.79
PCM1-204ENST00000517730 ADCY10Q96PN6 1610 aa19.96■□□□□ 0.79
PCM1-204ENST00000517730 NUP155O75694 1391 aa19.96■□□□□ 0.79
PCM1-204ENST00000517730 SHANK2Q9UPX8 1470 aa19.95■□□□□ 0.78
PCM1-204ENST00000517730 KDM2BQ8NHM5 1336 aa19.95■□□□□ 0.78
PCM1-204ENST00000517730 CENPQQ7L2Z9 268 aaPredicted RBP19.95■□□□□ 0.78
PCM1-204ENST00000517730 BRPF3Q9ULD4 1205 aa19.95■□□□□ 0.78
PCM1-204ENST00000517730 PRG4Q92954 1404 aaPredicted RBP19.94■□□□□ 0.78
PCM1-204ENST00000517730 PLIN1O60240 522 aa19.94■□□□□ 0.78
PCM1-204ENST00000517730 PER1O15534 1290 aaPredicted RBP19.94■□□□□ 0.78
PCM1-204ENST00000517730 DCAF11Q8TEB1 546 aa19.93■□□□□ 0.78
PCM1-204ENST00000517730 KDM2AQ9Y2K7 1162 aa19.93■□□□□ 0.78
PCM1-204ENST00000517730 FAM161AQ3B820 660 aa19.92■□□□□ 0.78
PCM1-204ENST00000517730 FRAT1Q92837 279 aaPredicted RBP19.91■□□□□ 0.78
PCM1-204ENST00000517730 PTPRGP23470 1445 aa19.9■□□□□ 0.78
PCM1-204ENST00000517730 ZNF777Q9ULD5 760 aaPredicted RBP19.89■□□□□ 0.77
PCM1-204ENST00000517730 TRPM1Q7Z4N2 1603 aa19.88■□□□□ 0.77
PCM1-204ENST00000517730 ZNF608Q9ULD9 1512 aaPredicted RBP19.88■□□□□ 0.77
PCM1-204ENST00000517730 COL17A1Q9UMD9 1497 aaPredicted RBP19.87■□□□□ 0.77
PCM1-204ENST00000517730 C9orf84Q5VXU9 1444 aa19.87■□□□□ 0.77
PCM1-204ENST00000517730 PRAG1Q86YV5 1406 aa19.87■□□□□ 0.77
PCM1-204ENST00000517730 GPRASP1Q5JY77 1395 aa19.86■□□□□ 0.77
PCM1-204ENST00000517730 LAMC1P11047 1609 aa19.86■□□□□ 0.77
PCM1-204ENST00000517730 SKAP1Q86WV1 359 aa19.85■□□□□ 0.77
PCM1-204ENST00000517730 C8orf34Q49A92 452 aa19.84■□□□□ 0.77
PCM1-204ENST00000517730 SLC4A3P48751 1232 aa19.84■□□□□ 0.77
PCM1-204ENST00000517730 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.84■□□□□ 0.77
PCM1-204ENST00000517730 UBE2Q2Q8WVN8 375 aa19.83■□□□□ 0.77
PCM1-204ENST00000517730 EIF4G3O43432 1585 aaKnown RBP19.83■□□□□ 0.76
PCM1-204ENST00000517730 CDC42BPAQ5VT25 1732 aa19.83■□□□□ 0.76
PCM1-204ENST00000517730 C20orf194Q5TEA3 1177 aa19.82■□□□□ 0.76
PCM1-204ENST00000517730 CC2D1BQ5T0F9 858 aaKnown RBP19.81■□□□□ 0.76
PCM1-204ENST00000517730 FAM43AQ8N2R8 423 aa19.8■□□□□ 0.76
PCM1-204ENST00000517730 PRDM15P57071 1507 aaPredicted RBP19.8■□□□□ 0.76
PCM1-204ENST00000517730 TSPY4P0CV99 314 aa19.79■□□□□ 0.76
PCM1-204ENST00000517730 TSPY10P0CW01 314 aa19.79■□□□□ 0.76
PCM1-204ENST00000517730 RSPH6AQ9H0K4 717 aa19.78■□□□□ 0.76
PCM1-204ENST00000517730 PANK3Q9H999 370 aa19.77■□□□□ 0.76
PCM1-204ENST00000517730 CCDC144AA2RUR9 1427 aa19.77■□□□□ 0.76
PCM1-204ENST00000517730 ERBINQ96RT1 1412 aa19.77■□□□□ 0.76
PCM1-204ENST00000517730 FRAT2O75474 233 aaPredicted RBP19.77■□□□□ 0.76
PCM1-204ENST00000517730 DUSP27Q5VZP5 1158 aa19.77■□□□□ 0.76
PCM1-204ENST00000517730 TESK2Q96S53 571 aa19.77■□□□□ 0.76
PCM1-204ENST00000517730 EIF3AQ14152 1382 aaKnown RBP19.76■□□□□ 0.75
PCM1-204ENST00000517730 DISP3Q9P2K9 1392 aa19.76■□□□□ 0.75
PCM1-204ENST00000517730 FAM135AQ9P2D6 1515 aa19.75■□□□□ 0.75
PCM1-204ENST00000517730 PLB1Q6P1J6 1458 aa19.75■□□□□ 0.75
PCM1-204ENST00000517730 CLASP1Q7Z460 1538 aa19.75■□□□□ 0.75
PCM1-204ENST00000517730 TMF1P82094 1093 aa19.75■□□□□ 0.75
PCM1-204ENST00000517730 ARHGEF5Q12774 1597 aa19.75■□□□□ 0.75
PCM1-204ENST00000517730 EIF2AK4Q9P2K8 1649 aaKnown RBP19.75■□□□□ 0.75
PCM1-204ENST00000517730 ADAMTS8Q9UP79 889 aa19.74■□□□□ 0.75
PCM1-204ENST00000517730 GRIN2AQ12879 1464 aa19.74■□□□□ 0.75
PCM1-204ENST00000517730 ABCC10Q5T3U5 1492 aa19.74■□□□□ 0.75
PCM1-204ENST00000517730 GOLGA2Q08379 1002 aa19.74■□□□□ 0.75
PCM1-204ENST00000517730 ZNF521Q96K83 1311 aa19.74■□□□□ 0.75
PCM1-204ENST00000517730 NBPF1Q3BBV0 1214 aa19.73■□□□□ 0.75
PCM1-204ENST00000517730 PLEKHH1Q9ULM0 1364 aa19.72■□□□□ 0.75
PCM1-204ENST00000517730 WDR43Q15061 677 aaKnown RBP eCLIP19.72■□□□□ 0.75
PCM1-204ENST00000517730 NUP160Q12769 1436 aa19.72■□□□□ 0.75
PCM1-204ENST00000517730 IFT140Q96RY7 1462 aa19.72■□□□□ 0.75
PCM1-204ENST00000517730 MRC2Q9UBG0 1479 aa19.71■□□□□ 0.75
PCM1-204ENST00000517730 A2MP01023 1474 aa19.7■□□□□ 0.74
PCM1-204ENST00000517730 PLEKHD1A6NEE1 506 aa19.7■□□□□ 0.74
PCM1-204ENST00000517730 EIF5BO60841 1220 aaKnown RBP19.69■□□□□ 0.74
PCM1-204ENST00000517730 RGS3P49796 1198 aa19.69■□□□□ 0.74
PCM1-204ENST00000517730 MAGI1Q96QZ7 1491 aaPredicted RBP19.68■□□□□ 0.74
PCM1-204ENST00000517730 VIRMAQ69YN4 1812 aaKnown RBP19.68■□□□□ 0.74
PCM1-204ENST00000517730 SLFN5Q08AF3 891 aa19.67■□□□□ 0.74
PCM1-204ENST00000517730 SYNJ2O15056 1496 aa19.67■□□□□ 0.74
PCM1-204ENST00000517730 CCDC141Q6ZP82 1450 aa19.67■□□□□ 0.74
PCM1-204ENST00000517730 PPP2R1AP30153 589 aa19.66■□□□□ 0.74
PCM1-204ENST00000517730 CARMIL2Q6F5E8 1435 aa19.66■□□□□ 0.74
PCM1-204ENST00000517730 BECN1Q14457 450 aa19.66■□□□□ 0.74
PCM1-204ENST00000517730 TRMT2AQ8IZ69 625 aaKnown RBP19.66■□□□□ 0.74
PCM1-204ENST00000517730 RGL3Q3MIN7 710 aa19.64■□□□□ 0.74
PCM1-204ENST00000517730 KNSTRNQ9Y448 316 aa19.64■□□□□ 0.74
PCM1-204ENST00000517730 RSPH4AQ5TD94 716 aa19.64■□□□□ 0.73
PCM1-204ENST00000517730 PLA2R1Q13018 1463 aa19.64■□□□□ 0.73
PCM1-204ENST00000517730 L1TD1Q5T7N2 865 aaKnown RBP19.63■□□□□ 0.73
PCM1-204ENST00000517730 MAPK8IP3Q9UPT6 1336 aa19.63■□□□□ 0.73
PCM1-204ENST00000517730 UNC13BO14795 1591 aa19.63■□□□□ 0.73
PCM1-204ENST00000517730 NKTRP30414 1462 aaKnown RBP19.63■□□□□ 0.73
PCM1-204ENST00000517730 PIK3C2GO75747 1445 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms