RNA–Protein interactions for RNA: ENST00000514410.1

PAPD7-204, Transcript of Non-canonical poly(A) RNA polymerase PAPD7, humanhuman

TSL 2

Gene PAPD7, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD7-204ENST00000514410 CCDC18Q5T9S5 1454 aa12.32□□□□□ -0.44
PAPD7-204ENST00000514410 SCAF1Q9H7N4 1312 aaKnown RBP12.32□□□□□ -0.44
PAPD7-204ENST00000514410 MYT1LQ9UL68 1186 aa12.31□□□□□ -0.44
PAPD7-204ENST00000514410 NPHP4O75161 1426 aaPredicted RBP12.3□□□□□ -0.44
PAPD7-204ENST00000514410 KDM5DQ9BY66 1539 aa12.29□□□□□ -0.44
PAPD7-204ENST00000514410 CASKIN1Q8WXD9 1431 aa12.28□□□□□ -0.44
PAPD7-204ENST00000514410 NLRP1Q9C000 1473 aa12.28□□□□□ -0.44
PAPD7-204ENST00000514410 UGGT1Q9NYU2 1555 aa12.28□□□□□ -0.44
PAPD7-204ENST00000514410 SPAG9O60271 1321 aaKnown RBP12.28□□□□□ -0.44
PAPD7-204ENST00000514410 TNRQ92752 1358 aa12.28□□□□□ -0.44
PAPD7-204ENST00000514410 POTEAQ6S8J7 498 aa12.27□□□□□ -0.45
PAPD7-204ENST00000514410 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.27□□□□□ -0.45
PAPD7-204ENST00000514410 PLEKHH2Q8IVE3 1493 aa12.27□□□□□ -0.45
PAPD7-204ENST00000514410 MBD5Q9P267 1494 aa12.26□□□□□ -0.45
PAPD7-204ENST00000514410 UBR1Q8IWV7 1749 aa12.25□□□□□ -0.45
PAPD7-204ENST00000514410 FYCO1Q9BQS8 1478 aa12.23□□□□□ -0.45
PAPD7-204ENST00000514410 RTEL1-TNFRSF6BF6WH68 1400 aa12.23□□□□□ -0.45
PAPD7-204ENST00000514410 FBXO31Q5XUX0 539 aaPredicted RBP12.23□□□□□ -0.45
PAPD7-204ENST00000514410 TIAM1Q13009 1591 aa12.22□□□□□ -0.45
PAPD7-204ENST00000514410 MIA2Q96PC5 1412 aa12.22□□□□□ -0.45
PAPD7-204ENST00000514410 SRCAPQ6ZRS2 3230 aa12.22□□□□□ -0.45
PAPD7-204ENST00000514410 HNRNPMP52272 730 aaKnown RBP eCLIP12.22□□□□□ -0.45
PAPD7-204ENST00000514410 GGT6Q6P531 493 aa12.22□□□□□ -0.45
PAPD7-204ENST00000514410 ROBO1Q9Y6N7 1651 aa12.22□□□□□ -0.45
PAPD7-204ENST00000514410 FAM135BQ49AJ0 1406 aa12.21□□□□□ -0.45
PAPD7-204ENST00000514410 ATP1B4Q9UN42 357 aaPredicted RBP12.21□□□□□ -0.45
PAPD7-204ENST00000514410 MAP3K1Q13233 1512 aa12.21□□□□□ -0.46
PAPD7-204ENST00000514410 DHX29Q7Z478 1369 aaKnown RBP12.2□□□□□ -0.46
PAPD7-204ENST00000514410 ANKLE2Q86XL3 938 aa12.2□□□□□ -0.46
PAPD7-204ENST00000514410 ARHGAP23Q9P227 1491 aa12.2□□□□□ -0.46
PAPD7-204ENST00000514410 MROH1Q8NDA8 1641 aa12.19□□□□□ -0.46
PAPD7-204ENST00000514410 NCOA2Q15596 1464 aa12.19□□□□□ -0.46
PAPD7-204ENST00000514410 SLIT1O75093 1534 aa12.18□□□□□ -0.46
PAPD7-204ENST00000514410 CAMSAP2Q08AD1 1489 aa12.17□□□□□ -0.46
PAPD7-204ENST00000514410 ABCC3O15438 1527 aa12.16□□□□□ -0.46
PAPD7-204ENST00000514410 THEMISQ8N1K5 641 aaPredicted RBP12.16□□□□□ -0.46
PAPD7-204ENST00000514410 ERVK-7P63135 1459 aa12.15□□□□□ -0.46
PAPD7-204ENST00000514410 SCAF11Q99590 1463 aaKnown RBP12.15□□□□□ -0.46
PAPD7-204ENST00000514410 ZNF777Q9ULD5 760 aaPredicted RBP12.15□□□□□ -0.46
PAPD7-204ENST00000514410 COL16A1Q07092 1604 aaPredicted RBP12.15□□□□□ -0.47
PAPD7-204ENST00000514410 CEP152O94986 1710 aa12.14□□□□□ -0.47
PAPD7-204ENST00000514410 NWD1Q149M9 1564 aa12.13□□□□□ -0.47
PAPD7-204ENST00000514410 EIF2AK4Q9P2K8 1649 aaKnown RBP12.13□□□□□ -0.47
PAPD7-204ENST00000514410 SENP3Q9H4L4 574 aaPredicted RBP12.13□□□□□ -0.47
PAPD7-204ENST00000514410 PHLPP1O60346 1717 aa12.13□□□□□ -0.47
PAPD7-204ENST00000514410 LRP6O75581 1613 aa12.12□□□□□ -0.47
PAPD7-204ENST00000514410 KDM5AP29375 1690 aaKnown RBP12.12□□□□□ -0.47
PAPD7-204ENST00000514410 ZNF644Q9H582 1327 aaPredicted RBP12.11□□□□□ -0.47
PAPD7-204ENST00000514410 CCDC141Q6ZP82 1450 aa12.11□□□□□ -0.47
PAPD7-204ENST00000514410 UPF1Q92900 1129 aaKnown RBP eCLIP12.11□□□□□ -0.47
PAPD7-204ENST00000514410 TET3O43151 1660 aa12.1□□□□□ -0.47
PAPD7-204ENST00000514410 ARHGEF5Q12774 1597 aa12.1□□□□□ -0.47
PAPD7-204ENST00000514410 LRRC9Q6ZRR7 1453 aa12.1□□□□□ -0.47
PAPD7-204ENST00000514410 CCNB3Q8WWL7 1395 aa12.1□□□□□ -0.47
PAPD7-204ENST00000514410 CFDP1Q9UEE9 299 aaPredicted RBP12.1□□□□□ -0.47
PAPD7-204ENST00000514410 EHBP1L1Q8N3D4 1523 aa12.09□□□□□ -0.47
PAPD7-204ENST00000514410 SHPRHQ149N8 1683 aa12.09□□□□□ -0.47
PAPD7-204ENST00000514410 MAST1Q9Y2H9 1570 aa12.09□□□□□ -0.47
PAPD7-204ENST00000514410 PIK3C2BO00750 1634 aa12.08□□□□□ -0.48
PAPD7-204ENST00000514410 KIF3BO15066 747 aa12.08□□□□□ -0.48
PAPD7-204ENST00000514410 CFAP65Q6ZU64 1925 aaKnown RBP12.07□□□□□ -0.48
PAPD7-204ENST00000514410 PRDM15P57071 1507 aaPredicted RBP12.07□□□□□ -0.48
PAPD7-204ENST00000514410 UBTFP17480 764 aaKnown RBP12.07□□□□□ -0.48
PAPD7-204ENST00000514410 LTKP29376 864 aa12.07□□□□□ -0.48
PAPD7-204ENST00000514410 WASHC2CQ9Y4E1 1318 aa12.07□□□□□ -0.48
PAPD7-204ENST00000514410 TMEM94Q12767 1356 aa12.06□□□□□ -0.48
PAPD7-204ENST00000514410 CEP162Q5TB80 1403 aa12.06□□□□□ -0.48
PAPD7-204ENST00000514410 NKTRP30414 1462 aaKnown RBP12.06□□□□□ -0.48
PAPD7-204ENST00000514410 CDK12Q9NYV4 1490 aaPredicted RBP12.06□□□□□ -0.48
PAPD7-204ENST00000514410 DIP2AQ14689 1571 aa12.05□□□□□ -0.48
PAPD7-204ENST00000514410 AHDC1Q5TGY3 1603 aaPredicted RBP12.04□□□□□ -0.48
PAPD7-204ENST00000514410 JCADQ9P266 1359 aa12.04□□□□□ -0.48
PAPD7-204ENST00000514410 ARHGAP31Q2M1Z3 1444 aa12.03□□□□□ -0.48
PAPD7-204ENST00000514410 FGD6Q6ZV73 1430 aa12.03□□□□□ -0.48
PAPD7-204ENST00000514410 CHD2O14647 1828 aaKnown RBP12.02□□□□□ -0.48
PAPD7-204ENST00000514410 MTUS2Q5JR59 1369 aa12□□□□□ -0.49
PAPD7-204ENST00000514410 TMEM2Q9UHN6 1383 aa12□□□□□ -0.49
PAPD7-204ENST00000514410 EFCAB6Q5THR3 1501 aa11.98□□□□□ -0.49
PAPD7-204ENST00000514410 EHMT2Q96KQ7 1210 aa11.98□□□□□ -0.49
PAPD7-204ENST00000514410 KCNA6P17658 529 aa11.97□□□□□ -0.49
PAPD7-204ENST00000514410 EP400Q96L91 3159 aa11.97□□□□□ -0.49
PAPD7-204ENST00000514410 SPATA31A6Q5VVP1 1343 aa11.96□□□□□ -0.49
PAPD7-204ENST00000514410 TXNDC2Q86VQ3 553 aa11.96□□□□□ -0.49
PAPD7-204ENST00000514410 RGS12O14924 1447 aa11.95□□□□□ -0.5
PAPD7-204ENST00000514410 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.95□□□□□ -0.5
PAPD7-204ENST00000514410 ADGRB3O60242 1522 aa11.95□□□□□ -0.5
PAPD7-204ENST00000514410 MYO5BQ9ULV0 1848 aa11.95□□□□□ -0.5
PAPD7-204ENST00000514410 CROCC2H7BZ55 1655 aa11.94□□□□□ -0.5
PAPD7-204ENST00000514410 NHSL1Q5SYE7 1610 aa11.94□□□□□ -0.5
PAPD7-204ENST00000514410 RSPH4AQ5TD94 716 aa11.94□□□□□ -0.5
PAPD7-204ENST00000514410 LMTK2Q8IWU2 1503 aa11.93□□□□□ -0.5
PAPD7-204ENST00000514410 DUOX2Q9NRD8 1548 aa11.93□□□□□ -0.5
PAPD7-204ENST00000514410 RBM33Q96EV2 1170 aaKnown RBP11.93□□□□□ -0.5
PAPD7-204ENST00000514410 SETBP1Q9Y6X0 1596 aa11.92□□□□□ -0.5
PAPD7-204ENST00000514410 ZNF772Q68DY9 489 aaPredicted RBP11.92□□□□□ -0.5
PAPD7-204ENST00000514410 TRIM52Q96A61 297 aa11.92□□□□□ -0.5
PAPD7-204ENST00000514410 SLAIN2Q9P270 581 aa11.92□□□□□ -0.5
PAPD7-204ENST00000514410 MSH6P52701 1360 aa11.92□□□□□ -0.5
PAPD7-204ENST00000514410 ZFYVE9O95405 1425 aa11.91□□□□□ -0.5
PAPD7-204ENST00000514410 NCOA3Q9Y6Q9 1424 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms