RNA–Protein interactions for RNA: ENST00000514013.1

SH3D19-209, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-209ENST00000514013 EEA1Q15075 1411 aa15.26■□□□□ 0.03
SH3D19-209ENST00000514013 ABCC1P33527 1531 aa15.25■□□□□ 0.03
SH3D19-209ENST00000514013 ESF1Q9H501 851 aaKnown RBP15.24■□□□□ 0.03
SH3D19-209ENST00000514013 ARHGAP35Q9NRY4 1499 aa15.24■□□□□ 0.03
SH3D19-209ENST00000514013 NPATQ14207 1427 aa15.24■□□□□ 0.03
SH3D19-209ENST00000514013 CNTLNQ9NXG0 1405 aa15.24■□□□□ 0.03
SH3D19-209ENST00000514013 FMN1Q68DA7 1419 aa15.23■□□□□ 0.03
SH3D19-209ENST00000514013 KIDINS220Q9ULH0 1771 aa15.22■□□□□ 0.03
SH3D19-209ENST00000514013 CDK11AQ9UQ88 783 aaPredicted RBP15.22■□□□□ 0.03
SH3D19-209ENST00000514013 CDC42BPBQ9Y5S2 1711 aa15.22■□□□□ 0.03
SH3D19-209ENST00000514013 ZMYM3Q14202 1370 aa15.21■□□□□ 0.02
SH3D19-209ENST00000514013 TCOF1Q13428 1488 aaKnown RBP15.2■□□□□ 0.02
SH3D19-209ENST00000514013 HSPA1LP34931 641 aa15.2■□□□□ 0.02
SH3D19-209ENST00000514013 EHMT2Q96KQ7 1210 aa15.2■□□□□ 0.02
SH3D19-209ENST00000514013 LRRIQ1Q96JM4 1722 aa15.2■□□□□ 0.02
SH3D19-209ENST00000514013 MED1Q15648 1581 aaPredicted RBP15.19■□□□□ 0.02
SH3D19-209ENST00000514013 ITSN2Q9NZM3 1697 aa15.19■□□□□ 0.02
SH3D19-209ENST00000514013 CLIP1P30622 1438 aa15.19■□□□□ 0.02
SH3D19-209ENST00000514013 PREX2Q70Z35 1606 aa15.19■□□□□ 0.02
SH3D19-209ENST00000514013 C19orf67A6NJJ6 358 aa15.19■□□□□ 0.02
SH3D19-209ENST00000514013 PLA2R1Q13018 1463 aa15.18■□□□□ 0.02
SH3D19-209ENST00000514013 MYO3AQ8NEV4 1616 aa15.17■□□□□ 0.02
SH3D19-209ENST00000514013 PTPRKQ15262 1439 aa15.17■□□□□ 0.02
SH3D19-209ENST00000514013 MROH2AA6NES4 1674 aa15.16■□□□□ 0.02
SH3D19-209ENST00000514013 SAMD9LQ8IVG5 1584 aa15.16■□□□□ 0.02
SH3D19-209ENST00000514013 CEP170BQ9Y4F5 1589 aaPredicted RBP15.15■□□□□ 0.02
SH3D19-209ENST00000514013 PKD2Q13563 968 aa15.15■□□□□ 0.02
SH3D19-209ENST00000514013 ZNF142P52746 1687 aaPredicted RBP15.15■□□□□ 0.02
SH3D19-209ENST00000514013 PIP4K2BP78356 416 aa15.13■□□□□ 0.01
SH3D19-209ENST00000514013 UBTFP17480 764 aaKnown RBP15.12■□□□□ 0.01
SH3D19-209ENST00000514013 CLTCQ00610 1675 aaKnown RBP15.12■□□□□ 0.01
SH3D19-209ENST00000514013 SYCP2Q9BX26 1530 aa15.12■□□□□ 0.01
SH3D19-209ENST00000514013 PLXNC1O60486 1568 aa15.11■□□□□ 0.01
SH3D19-209ENST00000514013 SPAG9O60271 1321 aaKnown RBP15.1■□□□□ 0.01
SH3D19-209ENST00000514013 CDC42BPAQ5VT25 1732 aa15.09■□□□□ 0.01
SH3D19-209ENST00000514013 SUPT6HQ7KZ85 1726 aaKnown RBP15.09■□□□□ 0.01
SH3D19-209ENST00000514013 HNRNPMP52272 730 aaKnown RBP eCLIP15.09■□□□□ 0.01
SH3D19-209ENST00000514013 CHADLQ6NUI6 762 aa15.09■□□□□ 0.01
SH3D19-209ENST00000514013 ZNF777Q9ULD5 760 aaPredicted RBP15.09■□□□□ 0.01
SH3D19-209ENST00000514013 ALKQ9UM73 1620 aa15.09■□□□□ 0.01
SH3D19-209ENST00000514013 A2MP01023 1474 aa15.08■□□□□ 0
SH3D19-209ENST00000514013 ATP7AQ04656 1500 aa15.07■□□□□ 0
SH3D19-209ENST00000514013 NEURL4Q96JN8 1562 aa15.07■□□□□ 0
SH3D19-209ENST00000514013 A2ML1A8K2U0 1454 aa15.07■□□□□ 0
SH3D19-209ENST00000514013 GPATCH8Q9UKJ3 1502 aaKnown RBP15.07■□□□□ 0
SH3D19-209ENST00000514013 INO80Q9ULG1 1556 aaPredicted RBP15.07■□□□□ 0
SH3D19-209ENST00000514013 GABBR2O75899 941 aa15.06■□□□□ 0
SH3D19-209ENST00000514013 PRR29P0C7W0 189 aa15.06■□□□□ 0
SH3D19-209ENST00000514013 GGT6Q6P531 493 aa15.06■□□□□ 0
SH3D19-209ENST00000514013 CASKIN1Q8WXD9 1431 aa15.06■□□□□ 0
SH3D19-209ENST00000514013 DNMT1P26358 1616 aaKnown RBP15.06■□□□□ 0
SH3D19-209ENST00000514013 SHANK2Q9UPX8 1470 aa15.05■□□□□ -0
SH3D19-209ENST00000514013 CPS1P31327 1500 aa15.04■□□□□ -0
SH3D19-209ENST00000514013 CCDC18Q5T9S5 1454 aa15.04■□□□□ -0
SH3D19-209ENST00000514013 TOM1O60784 492 aa15.03■□□□□ -0
SH3D19-209ENST00000514013 VWDEQ8N2E2 1590 aa15.02■□□□□ -0
SH3D19-209ENST00000514013 FBXO31Q5XUX0 539 aaPredicted RBP15.02■□□□□ -0
SH3D19-209ENST00000514013 KIAA1107Q9UPP5 1409 aa15.01□□□□□ -0.01
SH3D19-209ENST00000514013 TNRQ92752 1358 aa14.98□□□□□ -0.01
SH3D19-209ENST00000514013 RGS17Q9UGC6 210 aaPredicted RBP14.98□□□□□ -0.01
SH3D19-209ENST00000514013 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.98□□□□□ -0.01
SH3D19-209ENST00000514013 ZNF644Q9H582 1327 aaPredicted RBP14.97□□□□□ -0.01
SH3D19-209ENST00000514013 POLR1AO95602 1720 aaPredicted RBP14.97□□□□□ -0.01
SH3D19-209ENST00000514013 CFDP1Q9UEE9 299 aaPredicted RBP14.96□□□□□ -0.01
SH3D19-209ENST00000514013 PLEKHH2Q8IVE3 1493 aa14.95□□□□□ -0.02
SH3D19-209ENST00000514013 FYCO1Q9BQS8 1478 aa14.95□□□□□ -0.02
SH3D19-209ENST00000514013 PZPP20742 1482 aa14.94□□□□□ -0.02
SH3D19-209ENST00000514013 MBD5Q9P267 1494 aa14.94□□□□□ -0.02
SH3D19-209ENST00000514013 NPHP4O75161 1426 aaPredicted RBP14.93□□□□□ -0.02
SH3D19-209ENST00000514013 MED14O60244 1454 aa14.93□□□□□ -0.02
SH3D19-209ENST00000514013 LRRC7Q96NW7 1537 aa14.92□□□□□ -0.02
SH3D19-209ENST00000514013 ANKLE2Q86XL3 938 aa14.92□□□□□ -0.02
SH3D19-209ENST00000514013 CCNB3Q8WWL7 1395 aa14.92□□□□□ -0.02
SH3D19-209ENST00000514013 ADGBQ8N7X0 1667 aa14.92□□□□□ -0.02
SH3D19-209ENST00000514013 STRCP1A6NGW2 1772 aa14.91□□□□□ -0.02
SH3D19-209ENST00000514013 DHX29Q7Z478 1369 aaKnown RBP14.91□□□□□ -0.02
SH3D19-209ENST00000514013 MIA2Q96PC5 1412 aa14.9□□□□□ -0.02
SH3D19-209ENST00000514013 KDM5DQ9BY66 1539 aa14.89□□□□□ -0.03
SH3D19-209ENST00000514013 KIF3BO15066 747 aa14.89□□□□□ -0.03
SH3D19-209ENST00000514013 LHX8Q68G74 356 aa14.89□□□□□ -0.03
SH3D19-209ENST00000514013 UGGT1Q9NYU2 1555 aa14.88□□□□□ -0.03
SH3D19-209ENST00000514013 DEPDC5O75140 1603 aa14.88□□□□□ -0.03
SH3D19-209ENST00000514013 TIAM1Q13009 1591 aa14.87□□□□□ -0.03
SH3D19-209ENST00000514013 RTEL1-TNFRSF6BF6WH68 1400 aa14.87□□□□□ -0.03
SH3D19-209ENST00000514013 THEMISQ8N1K5 641 aaPredicted RBP14.87□□□□□ -0.03
SH3D19-209ENST00000514013 NLRP1Q9C000 1473 aa14.87□□□□□ -0.03
SH3D19-209ENST00000514013 RNF17Q9BXT8 1623 aaKnown RBP14.86□□□□□ -0.03
SH3D19-209ENST00000514013 IQGAP1P46940 1657 aa14.86□□□□□ -0.03
SH3D19-209ENST00000514013 CD44P16070 742 aaKnown RBP14.85□□□□□ -0.03
SH3D19-209ENST00000514013 FAM135AQ9P2D6 1515 aa14.85□□□□□ -0.03
SH3D19-209ENST00000514013 POTEAQ6S8J7 498 aa14.84□□□□□ -0.03
SH3D19-209ENST00000514013 FARP1Q9Y4F1 1045 aaPredicted RBP14.84□□□□□ -0.03
SH3D19-209ENST00000514013 WASHC2CQ9Y4E1 1318 aa14.84□□□□□ -0.03
SH3D19-209ENST00000514013 SYNMO15061 1565 aa14.83□□□□□ -0.04
SH3D19-209ENST00000514013 MTUS2Q5JR59 1369 aa14.83□□□□□ -0.04
SH3D19-209ENST00000514013 ZC3H13Q5T200 1668 aaKnown RBP14.81□□□□□ -0.04
SH3D19-209ENST00000514013 CCDC141Q6ZP82 1450 aa14.8□□□□□ -0.04
SH3D19-209ENST00000514013 ABCC3O15438 1527 aa14.78□□□□□ -0.04
SH3D19-209ENST00000514013 ERVK-7P63135 1459 aa14.77□□□□□ -0.04
SH3D19-209ENST00000514013 NCOA2Q15596 1464 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms