RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 TNRQ92752 1358 aa20.4■□□□□ 0.86
DDX41-215ENST00000512431 THEMISQ8N1K5 641 aaPredicted RBP20.39■□□□□ 0.85
DDX41-215ENST00000512431 CHIC1Q5VXU3 224 aa20.38■□□□□ 0.85
DDX41-215ENST00000512431 FBXO31Q5XUX0 539 aaPredicted RBP20.38■□□□□ 0.85
DDX41-215ENST00000512431 DHX29Q7Z478 1369 aaKnown RBP20.37■□□□□ 0.85
DDX41-215ENST00000512431 KIF3BO15066 747 aa20.37■□□□□ 0.85
DDX41-215ENST00000512431 RTEL1-TNFRSF6BF6WH68 1400 aa20.36■□□□□ 0.85
DDX41-215ENST00000512431 ZNF644Q9H582 1327 aaPredicted RBP20.35■□□□□ 0.85
DDX41-215ENST00000512431 WASHC2CQ9Y4E1 1318 aa20.35■□□□□ 0.85
DDX41-215ENST00000512431 POLR1AO95602 1720 aaPredicted RBP20.35■□□□□ 0.85
DDX41-215ENST00000512431 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.34■□□□□ 0.85
DDX41-215ENST00000512431 NEURL4Q96JN8 1562 aa20.33■□□□□ 0.84
DDX41-215ENST00000512431 PZPP20742 1482 aa20.31■□□□□ 0.84
DDX41-215ENST00000512431 MBD5Q9P267 1494 aa20.3■□□□□ 0.84
DDX41-215ENST00000512431 NPHP4O75161 1426 aaPredicted RBP20.3■□□□□ 0.84
DDX41-215ENST00000512431 KDM5DQ9BY66 1539 aa20.3■□□□□ 0.84
DDX41-215ENST00000512431 MIA2Q96PC5 1412 aa20.29■□□□□ 0.84
DDX41-215ENST00000512431 FAM135AQ9P2D6 1515 aa20.29■□□□□ 0.84
DDX41-215ENST00000512431 NLRP1Q9C000 1473 aa20.29■□□□□ 0.84
DDX41-215ENST00000512431 RSPH4AQ5TD94 716 aa20.28■□□□□ 0.84
DDX41-215ENST00000512431 SENP3Q9H4L4 574 aaPredicted RBP20.28■□□□□ 0.84
DDX41-215ENST00000512431 VWDEQ8N2E2 1590 aa20.27■□□□□ 0.84
DDX41-215ENST00000512431 UGGT1Q9NYU2 1555 aa20.27■□□□□ 0.84
DDX41-215ENST00000512431 MED14O60244 1454 aa20.26■□□□□ 0.83
DDX41-215ENST00000512431 TIAM1Q13009 1591 aa20.25■□□□□ 0.83
DDX41-215ENST00000512431 DEPDC5O75140 1603 aa20.24■□□□□ 0.83
DDX41-215ENST00000512431 CCDC141Q6ZP82 1450 aa20.23■□□□□ 0.83
DDX41-215ENST00000512431 TSPY4P0CV99 314 aa20.22■□□□□ 0.83
DDX41-215ENST00000512431 TSPY10P0CW01 314 aa20.22■□□□□ 0.83
DDX41-215ENST00000512431 EHBP1L1Q8N3D4 1523 aa20.22■□□□□ 0.83
DDX41-215ENST00000512431 CEP162Q5TB80 1403 aa20.21■□□□□ 0.83
DDX41-215ENST00000512431 ALKQ9UM73 1620 aa20.19■□□□□ 0.82
DDX41-215ENST00000512431 IQGAP1P46940 1657 aa20.19■□□□□ 0.82
DDX41-215ENST00000512431 LRRC7Q96NW7 1537 aa20.18■□□□□ 0.82
DDX41-215ENST00000512431 CAMSAP2Q08AD1 1489 aa20.15■□□□□ 0.82
DDX41-215ENST00000512431 RNF17Q9BXT8 1623 aaKnown RBP20.15■□□□□ 0.82
DDX41-215ENST00000512431 SYNMO15061 1565 aa20.14■□□□□ 0.81
DDX41-215ENST00000512431 RGS17Q9UGC6 210 aaPredicted RBP20.1■□□□□ 0.81
DDX41-215ENST00000512431 NCOA2Q15596 1464 aa20.1■□□□□ 0.81
DDX41-215ENST00000512431 STRCP1A6NGW2 1772 aa20.09■□□□□ 0.81
DDX41-215ENST00000512431 TXNDC2Q86VQ3 553 aa20.09■□□□□ 0.81
DDX41-215ENST00000512431 EID1Q9Y6B2 187 aa20.08■□□□□ 0.81
DDX41-215ENST00000512431 ARHGEF5Q12774 1597 aa20.08■□□□□ 0.8
DDX41-215ENST00000512431 ABCC3O15438 1527 aa20.07■□□□□ 0.8
DDX41-215ENST00000512431 ERVK-7P63135 1459 aa20.07■□□□□ 0.8
DDX41-215ENST00000512431 SCAF11Q99590 1463 aaKnown RBP20.07■□□□□ 0.8
DDX41-215ENST00000512431 ZC3H13Q5T200 1668 aaKnown RBP20.07■□□□□ 0.8
DDX41-215ENST00000512431 LTKP29376 864 aa20.03■□□□□ 0.8
DDX41-215ENST00000512431 FAM135BQ49AJ0 1406 aa20.02■□□□□ 0.8
DDX41-215ENST00000512431 STAG3Q9UJ98 1225 aa20.01■□□□□ 0.79
DDX41-215ENST00000512431 UBR1Q8IWV7 1749 aa20.01■□□□□ 0.79
DDX41-215ENST00000512431 EIF2AK4Q9P2K8 1649 aaKnown RBP19.99■□□□□ 0.79
DDX41-215ENST00000512431 POTEAQ6S8J7 498 aa19.99■□□□□ 0.79
DDX41-215ENST00000512431 ARHGAP23Q9P227 1491 aa19.99■□□□□ 0.79
DDX41-215ENST00000512431 SLIT1O75093 1534 aa19.98■□□□□ 0.79
DDX41-215ENST00000512431 MAST1Q9Y2H9 1570 aa19.98■□□□□ 0.79
DDX41-215ENST00000512431 TMEM94Q12767 1356 aa19.95■□□□□ 0.78
DDX41-215ENST00000512431 KCNA6P17658 529 aa19.94■□□□□ 0.78
DDX41-215ENST00000512431 PROSER2Q86WR7 435 aaPredicted RBP19.94■□□□□ 0.78
DDX41-215ENST00000512431 CFAP65Q6ZU64 1925 aaKnown RBP19.94■□□□□ 0.78
DDX41-215ENST00000512431 ARHGAP31Q2M1Z3 1444 aa19.93■□□□□ 0.78
DDX41-215ENST00000512431 CEP152O94986 1710 aa19.93■□□□□ 0.78
DDX41-215ENST00000512431 MROH1Q8NDA8 1641 aa19.93■□□□□ 0.78
DDX41-215ENST00000512431 TMEM2Q9UHN6 1383 aa19.93■□□□□ 0.78
DDX41-215ENST00000512431 DUOX2Q9NRD8 1548 aa19.92■□□□□ 0.78
DDX41-215ENST00000512431 XIRP1Q702N8 1843 aaKnown RBP19.92■□□□□ 0.78
DDX41-215ENST00000512431 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.91■□□□□ 0.783e-8■■■□□ 15.2
DDX41-215ENST00000512431 MYOM3Q5VTT5 1437 aa19.9■□□□□ 0.78
DDX41-215ENST00000512431 KANK1Q14678 1352 aa19.89■□□□□ 0.77
DDX41-215ENST00000512431 LRRC9Q6ZRR7 1453 aa19.89■□□□□ 0.77
DDX41-215ENST00000512431 SLC26A8Q96RN1 970 aa19.89■□□□□ 0.77
DDX41-215ENST00000512431 RBM33Q96EV2 1170 aaKnown RBP19.88■□□□□ 0.77
DDX41-215ENST00000512431 BCANQ96GW7 911 aa19.88■□□□□ 0.77
DDX41-215ENST00000512431 KIF15Q9NS87 1388 aa19.87■□□□□ 0.77
DDX41-215ENST00000512431 RRP7BPQ9NSQ0 103 aa19.87■□□□□ 0.77
DDX41-215ENST00000512431 ROBO1Q9Y6N7 1651 aa19.87■□□□□ 0.77
DDX41-215ENST00000512431 PIK3C2BO00750 1634 aa19.86■□□□□ 0.77
DDX41-215ENST00000512431 MSH6P52701 1360 aa19.85■□□□□ 0.77
DDX41-215ENST00000512431 IDI1Q13907 227 aa19.85■□□□□ 0.77
DDX41-215ENST00000512431 SLAIN2Q9P270 581 aa19.85■□□□□ 0.77
DDX41-215ENST00000512431 PRDM15P57071 1507 aaPredicted RBP19.85■□□□□ 0.77
DDX41-215ENST00000512431 EFCAB6Q5THR3 1501 aa19.85■□□□□ 0.77
DDX41-215ENST00000512431 ERBINQ96RT1 1412 aa19.85■□□□□ 0.77
DDX41-215ENST00000512431 JCADQ9P266 1359 aa19.83■□□□□ 0.77
DDX41-215ENST00000512431 MAP3K1Q13233 1512 aa19.81■□□□□ 0.76
DDX41-215ENST00000512431 NKTRP30414 1462 aaKnown RBP19.8■□□□□ 0.76
DDX41-215ENST00000512431 KANK4Q5T7N3 995 aaPredicted RBP19.8■□□□□ 0.76
DDX41-215ENST00000512431 KDM5AP29375 1690 aaKnown RBP19.8■□□□□ 0.76
DDX41-215ENST00000512431 VPS8Q8N3P4 1428 aa19.79■□□□□ 0.76
DDX41-215ENST00000512431 TET3O43151 1660 aa19.79■□□□□ 0.76
DDX41-215ENST00000512431 MEX3CQ5U5Q3 659 aaKnown RBP19.79■□□□□ 0.76
DDX41-215ENST00000512431 PHLPP1O60346 1717 aa19.77■□□□□ 0.76
DDX41-215ENST00000512431 HDGFP51858 240 aaKnown RBP19.77■□□□□ 0.76
DDX41-215ENST00000512431 ZNF772Q68DY9 489 aaPredicted RBP19.77■□□□□ 0.76
DDX41-215ENST00000512431 SLC52A1Q9NWF4 448 aa19.77■□□□□ 0.76
DDX41-215ENST00000512431 ABCC5O15440 1437 aa19.76■□□□□ 0.75
DDX41-215ENST00000512431 SPATA31A6Q5VVP1 1343 aa19.76■□□□□ 0.75
DDX41-215ENST00000512431 SETD1AO15047 1707 aaKnown RBP19.75■□□□□ 0.75
DDX41-215ENST00000512431 PPP1R15AO75807 674 aaPredicted RBP19.74■□□□□ 0.75
DDX41-215ENST00000512431 C14orf37Q86TY3 774 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms