RNA–Protein interactions for RNA: ENST00000511214.1

SNF8-210, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-210ENST00000511214 CCDC136Q96JN2 1154 aa12.23□□□□□ -0.45
SNF8-210ENST00000511214 ZNF608Q9ULD9 1512 aaPredicted RBP12.22□□□□□ -0.45
SNF8-210ENST00000511214 C9orf84Q5VXU9 1444 aa12.22□□□□□ -0.45
SNF8-210ENST00000511214 EIF4G3O43432 1585 aaKnown RBP12.22□□□□□ -0.45
SNF8-210ENST00000511214 SYNJ2O15056 1496 aa12.21□□□□□ -0.45
SNF8-210ENST00000511214 CDC42BPAQ5VT25 1732 aa12.21□□□□□ -0.45
SNF8-210ENST00000511214 ANP32AP39687 249 aaKnown RBP12.21□□□□□ -0.45
SNF8-210ENST00000511214 TMC1Q8TDI8 760 aa12.21□□□□□ -0.45
SNF8-210ENST00000511214 LAMC1P11047 1609 aa12.21□□□□□ -0.46
SNF8-210ENST00000511214 WASHC2CQ9Y4E1 1318 aa12.2□□□□□ -0.46
SNF8-210ENST00000511214 ABCA8O94911 1581 aa12.2□□□□□ -0.46
SNF8-210ENST00000511214 NUP160Q12769 1436 aa12.2□□□□□ -0.46
SNF8-210ENST00000511214 IPO9Q96P70 1041 aaKnown RBP12.19□□□□□ -0.46
SNF8-210ENST00000511214 PLB1Q6P1J6 1458 aa12.19□□□□□ -0.46
SNF8-210ENST00000511214 NUP155O75694 1391 aa12.18□□□□□ -0.46
SNF8-210ENST00000511214 RSPH4AQ5TD94 716 aa12.18□□□□□ -0.46
SNF8-210ENST00000511214 CARD11Q9BXL7 1154 aa12.18□□□□□ -0.46
SNF8-210ENST00000511214 ARID3CA6NKF2 412 aa12.17□□□□□ -0.46
SNF8-210ENST00000511214 TCERG1O14776 1098 aaKnown RBP12.17□□□□□ -0.46
SNF8-210ENST00000511214 GPRASP1Q5JY77 1395 aa12.17□□□□□ -0.46
SNF8-210ENST00000511214 PARD3Q8TEW0 1356 aa12.17□□□□□ -0.46
SNF8-210ENST00000511214 PLEKHD1A6NEE1 506 aa12.16□□□□□ -0.46
SNF8-210ENST00000511214 MS4A1P11836 297 aa12.16□□□□□ -0.46
SNF8-210ENST00000511214 NLRP13Q86W25 1043 aa12.16□□□□□ -0.46
SNF8-210ENST00000511214 PLEKHH2Q8IVE3 1493 aa12.15□□□□□ -0.46
SNF8-210ENST00000511214 MAST1Q9Y2H9 1570 aa12.15□□□□□ -0.46
SNF8-210ENST00000511214 TSPY4P0CV99 314 aa12.15□□□□□ -0.46
SNF8-210ENST00000511214 TSPY10P0CW01 314 aa12.15□□□□□ -0.46
SNF8-210ENST00000511214 DEKP35659 375 aaKnown RBP12.15□□□□□ -0.46
SNF8-210ENST00000511214 RRP1P56182 461 aaKnown RBP12.15□□□□□ -0.46
SNF8-210ENST00000511214 TRPM1Q7Z4N2 1603 aa12.15□□□□□ -0.47
SNF8-210ENST00000511214 PRAG1Q86YV5 1406 aa12.13□□□□□ -0.47
SNF8-210ENST00000511214 EIF2AK4Q9P2K8 1649 aaKnown RBP12.13□□□□□ -0.47
SNF8-210ENST00000511214 ZBTB47Q9UFB7 747 aaPredicted RBP12.13□□□□□ -0.47
SNF8-210ENST00000511214 ATP10BO94823 1461 aa12.13□□□□□ -0.47
SNF8-210ENST00000511214 CCDC141Q6ZP82 1450 aa12.13□□□□□ -0.47
SNF8-210ENST00000511214 UNC13BO14795 1591 aa12.13□□□□□ -0.47
SNF8-210ENST00000511214 FAM135AQ9P2D6 1515 aa12.12□□□□□ -0.47
SNF8-210ENST00000511214 ST20-MTHFSA0A0A6YYL1 179 aa12.12□□□□□ -0.47
SNF8-210ENST00000511214 ZNF326Q5BKZ1 582 aaKnown RBP12.12□□□□□ -0.47
SNF8-210ENST00000511214 BLMP54132 1417 aaPredicted RBP12.11□□□□□ -0.47
SNF8-210ENST00000511214 COL17A1Q9UMD9 1497 aaPredicted RBP12.11□□□□□ -0.47
SNF8-210ENST00000511214 RCAN3Q9UKA8 241 aa12.11□□□□□ -0.47
SNF8-210ENST00000511214 ZNF777Q9ULD5 760 aaPredicted RBP12.11□□□□□ -0.47
SNF8-210ENST00000511214 PRDM15P57071 1507 aaPredicted RBP12.11□□□□□ -0.47
SNF8-210ENST00000511214 ATP10AO60312 1499 aa12.1□□□□□ -0.47
SNF8-210ENST00000511214 CHMP7Q8WUX9 453 aaPredicted RBP12.1□□□□□ -0.47
SNF8-210ENST00000511214 JPH4Q96JJ6 628 aa12.1□□□□□ -0.47
SNF8-210ENST00000511214 POLR3GLQ9BT43 218 aa12.1□□□□□ -0.47
SNF8-210ENST00000511214 PREX2Q70Z35 1606 aa12.1□□□□□ -0.47
SNF8-210ENST00000511214 PAK3O75914 559 aaPredicted RBP12.09□□□□□ -0.47
SNF8-210ENST00000511214 RTL5Q5HYW3 569 aaPredicted RBP12.09□□□□□ -0.47
SNF8-210ENST00000511214 USP35Q9P2H5 1018 aa12.09□□□□□ -0.47
SNF8-210ENST00000511214 CCDC144AA2RUR9 1427 aa12.09□□□□□ -0.47
SNF8-210ENST00000511214 DCAF11Q8TEB1 546 aa12.08□□□□□ -0.48
SNF8-210ENST00000511214 PER1O15534 1290 aaPredicted RBP12.07□□□□□ -0.48
SNF8-210ENST00000511214 PLXNC1O60486 1568 aa12.07□□□□□ -0.48
SNF8-210ENST00000511214 SAMD9LQ8IVG5 1584 aa12.07□□□□□ -0.48
SNF8-210ENST00000511214 IQGAP3Q86VI3 1631 aa12.07□□□□□ -0.48
SNF8-210ENST00000511214 MAGI2Q86UL8 1455 aa12.05□□□□□ -0.48
SNF8-210ENST00000511214 A2MP01023 1474 aa12.04□□□□□ -0.48
SNF8-210ENST00000511214 EXOC6Q8TAG9 804 aa12.04□□□□□ -0.48
SNF8-210ENST00000511214 BACH2Q9BYV9 841 aa12.04□□□□□ -0.48
SNF8-210ENST00000511214 RNF17Q9BXT8 1623 aaKnown RBP12.04□□□□□ -0.48
SNF8-210ENST00000511214 ERBINQ96RT1 1412 aa12.03□□□□□ -0.48
SNF8-210ENST00000511214 CDC42BPBQ9Y5S2 1711 aa12.03□□□□□ -0.48
SNF8-210ENST00000511214 PPM1GO15355 546 aaPredicted RBP12.03□□□□□ -0.48
SNF8-210ENST00000511214 PDE4AP27815 886 aa12.03□□□□□ -0.48
SNF8-210ENST00000511214 DDRGK1Q96HY6 314 aa12.03□□□□□ -0.48
SNF8-210ENST00000511214 STAC3Q96MF2 364 aa12.03□□□□□ -0.48
SNF8-210ENST00000511214 PLA2R1Q13018 1463 aa12.02□□□□□ -0.48
SNF8-210ENST00000511214 CLASP1Q7Z460 1538 aa12.02□□□□□ -0.48
SNF8-210ENST00000511214 KDM2AQ9Y2K7 1162 aa12.02□□□□□ -0.49
SNF8-210ENST00000511214 DUOX2Q9NRD8 1548 aa12.01□□□□□ -0.49
SNF8-210ENST00000511214 TMF1P82094 1093 aa12.01□□□□□ -0.49
SNF8-210ENST00000511214 TESK2Q96S53 571 aa12.01□□□□□ -0.49
SNF8-210ENST00000511214 ERCC6Q03468 1493 aa12.01□□□□□ -0.49
SNF8-210ENST00000511214 NBR1Q14596 966 aa12□□□□□ -0.49
SNF8-210ENST00000511214 HNRNPMP52272 730 aaKnown RBP eCLIP11.99□□□□□ -0.49
SNF8-210ENST00000511214 MYO5CQ9NQX4 1742 aa11.98□□□□□ -0.49
SNF8-210ENST00000511214 NPC1L1Q9UHC9 1359 aa11.98□□□□□ -0.49
SNF8-210ENST00000511214 SYCP2Q9BX26 1530 aa11.97□□□□□ -0.49
SNF8-210ENST00000511214 DISP3Q9P2K9 1392 aa11.97□□□□□ -0.49
SNF8-210ENST00000511214 CDCA8Q53HL2 280 aa11.97□□□□□ -0.49
SNF8-210ENST00000511214 SYNMO15061 1565 aa11.96□□□□□ -0.49
SNF8-210ENST00000511214 EIF3AQ14152 1382 aaKnown RBP11.96□□□□□ -0.49
SNF8-210ENST00000511214 CNGB1Q14028 1251 aaPredicted RBP11.96□□□□□ -0.49
SNF8-210ENST00000511214 NEURL4Q96JN8 1562 aa11.96□□□□□ -0.5
SNF8-210ENST00000511214 PIK3C2GO75747 1445 aa11.95□□□□□ -0.5
SNF8-210ENST00000511214 SCAPERQ9BY12 1400 aa11.95□□□□□ -0.5
SNF8-210ENST00000511214 IQGAP1P46940 1657 aa11.95□□□□□ -0.5
SNF8-210ENST00000511214 SLC24A1O60721 1099 aa11.95□□□□□ -0.5
SNF8-210ENST00000511214 NBPF1Q3BBV0 1214 aa11.95□□□□□ -0.5
SNF8-210ENST00000511214 CENPQQ7L2Z9 268 aaPredicted RBP11.95□□□□□ -0.5
SNF8-210ENST00000511214 NGEFQ8N5V2 710 aa11.95□□□□□ -0.5
SNF8-210ENST00000511214 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.95□□□□□ -0.5
SNF8-210ENST00000511214 PANK3Q9H999 370 aa11.95□□□□□ -0.5
SNF8-210ENST00000511214 ARHGAP5Q13017 1502 aa11.95□□□□□ -0.5
SNF8-210ENST00000511214 KDM2BQ8NHM5 1336 aa11.94□□□□□ -0.5
SNF8-210ENST00000511214 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms