RNA–Protein interactions for RNA: ENST00000511214.1

SNF8-210, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-210ENST00000511214 AEBP2Q6ZN18 517 aaPredicted RBP18.45■□□□□ 0.54
SNF8-210ENST00000511214 NISCHQ9Y2I1 1504 aa18.43■□□□□ 0.54
SNF8-210ENST00000511214 CHIC1Q5VXU3 224 aa18.03■□□□□ 0.48
SNF8-210ENST00000511214 PHF23Q9BUL5 403 aaPredicted RBP15.88■□□□□ 0.13
SNF8-210ENST00000511214 CCDC180Q9P1Z9 1646 aa15.71■□□□□ 0.11
SNF8-210ENST00000511214 ZCCHC6Q5VYS8 1495 aaKnown RBP15.66■□□□□ 0.1
SNF8-210ENST00000511214 SENP3Q9H4L4 574 aaPredicted RBP15.61■□□□□ 0.09
SNF8-210ENST00000511214 SHROOM4Q9ULL8 1493 aa15.5■□□□□ 0.07
SNF8-210ENST00000511214 SUPT5HO00267 1087 aaKnown RBP15.33■□□□□ 0.04
SNF8-210ENST00000511214 DCAF1Q9Y4B6 1507 aa15.31■□□□□ 0.04
SNF8-210ENST00000511214 MYO15BQ96JP2 1530 aa15.08■□□□□ 0.01
SNF8-210ENST00000511214 HRCP23327 699 aa15.08■□□□□ 0
SNF8-210ENST00000511214 DCAF8L2P0C7V8 631 aa14.84□□□□□ -0.03
SNF8-210ENST00000511214 ABCC9O60706 1549 aa14.82□□□□□ -0.04
SNF8-210ENST00000511214 PCGF6Q9BYE7 350 aa14.77□□□□□ -0.05
SNF8-210ENST00000511214 TRIM26Q12899 539 aaPredicted RBP14.64□□□□□ -0.07
SNF8-210ENST00000511214 PLPPR3Q6T4P5 718 aa14.63□□□□□ -0.07
SNF8-210ENST00000511214 RSF1Q96T23 1441 aaPredicted RBP14.6□□□□□ -0.07
SNF8-210ENST00000511214 RB1CC1Q8TDY2 1594 aa14.56□□□□□ -0.08
SNF8-210ENST00000511214 LOC105371045A0A1W2PR82 267 aa14.55□□□□□ -0.08
SNF8-210ENST00000511214 ZEB1P37275 1124 aaPredicted RBP14.55□□□□□ -0.08
SNF8-210ENST00000511214 FOXD1Q16676 465 aa14.51□□□□□ -0.09
SNF8-210ENST00000511214 SCRIBQ14160 1630 aa14.49□□□□□ -0.09
SNF8-210ENST00000511214 PPARGC1BQ86YN6 1023 aaKnown RBP14.47□□□□□ -0.09
SNF8-210ENST00000511214 NACADO15069 1562 aa14.45□□□□□ -0.1
SNF8-210ENST00000511214 TRIM41Q8WV44 630 aa14.4□□□□□ -0.1
SNF8-210ENST00000511214 MROH2BQ7Z745 1585 aa14.24□□□□□ -0.13
SNF8-210ENST00000511214 BAZ1AQ9NRL2 1556 aaPredicted RBP14.24□□□□□ -0.13
SNF8-210ENST00000511214 CECR2Q9BXF3 1484 aa14.21□□□□□ -0.13
SNF8-210ENST00000511214 PELP1Q8IZL8 1130 aaKnown RBP14.2□□□□□ -0.14
SNF8-210ENST00000511214 EIF4G1Q04637 1599 aaKnown RBP14.2□□□□□ -0.14
SNF8-210ENST00000511214 WIZO95785 1651 aa14.15□□□□□ -0.14
SNF8-210ENST00000511214 FAM9AQ8IZU1 332 aaPredicted RBP14.1□□□□□ -0.15
SNF8-210ENST00000511214 WRNQ14191 1432 aaPredicted RBP eCLIP14.08□□□□□ -0.15
SNF8-210ENST00000511214 TOP2AP11388 1531 aaKnown RBP14.08□□□□□ -0.16
SNF8-210ENST00000511214 EEA1Q15075 1411 aa14.03□□□□□ -0.16
SNF8-210ENST00000511214 PPP6R1Q9UPN7 881 aa14.01□□□□□ -0.17
SNF8-210ENST00000511214 ADRA2BP18089 450 aa13.99□□□□□ -0.17
SNF8-210ENST00000511214 SMARCA4P51532 1647 aa13.98□□□□□ -0.17
SNF8-210ENST00000511214 SMARCA2P51531 1590 aa13.96□□□□□ -0.18
SNF8-210ENST00000511214 TNIKQ9UKE5 1360 aa13.95□□□□□ -0.18
SNF8-210ENST00000511214 CCDC88BA6NC98 1476 aa13.93□□□□□ -0.18
SNF8-210ENST00000511214 SCAF1Q9H7N4 1312 aaKnown RBP13.9□□□□□ -0.18
SNF8-210ENST00000511214 CEP162Q5TB80 1403 aa13.89□□□□□ -0.19
SNF8-210ENST00000511214 CCER1Q8TC90 406 aaPredicted RBP13.88□□□□□ -0.19
SNF8-210ENST00000511214 ABCC8Q09428 1581 aa13.85□□□□□ -0.19
SNF8-210ENST00000511214 PEG3Q9GZU2 1588 aa13.83□□□□□ -0.2
SNF8-210ENST00000511214 GOLGA3Q08378 1498 aa13.82□□□□□ -0.2
SNF8-210ENST00000511214 ACIN1Q9UKV3 1341 aaKnown RBP13.82□□□□□ -0.2
SNF8-210ENST00000511214 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.81□□□□□ -0.2
SNF8-210ENST00000511214 CSRNP3Q8WYN3 585 aa13.8□□□□□ -0.2
SNF8-210ENST00000511214 EHMT2Q96KQ7 1210 aa13.8□□□□□ -0.2
SNF8-210ENST00000511214 UNC13AQ9UPW8 1703 aa13.79□□□□□ -0.2
SNF8-210ENST00000511214 CENPBP07199 599 aaPredicted RBP13.78□□□□□ -0.2
SNF8-210ENST00000511214 SOGA1O94964 1423 aa13.78□□□□□ -0.2
SNF8-210ENST00000511214 KIF21BO75037 1637 aa13.76□□□□□ -0.21
SNF8-210ENST00000511214 DIEXFQ68CQ4 756 aaKnown RBP13.75□□□□□ -0.21
SNF8-210ENST00000511214 CEP164Q9UPV0 1460 aa13.74□□□□□ -0.21
SNF8-210ENST00000511214 BAZ1BQ9UIG0 1483 aaKnown RBP13.71□□□□□ -0.21
SNF8-210ENST00000511214 NEUROD1Q13562 356 aa13.67□□□□□ -0.22
SNF8-210ENST00000511214 RUSC2Q8N2Y8 1516 aa13.66□□□□□ -0.22
SNF8-210ENST00000511214 ZNF316A6NFI3 1004 aaPredicted RBP13.66□□□□□ -0.22
SNF8-210ENST00000511214 PIAS4Q8N2W9 510 aaPredicted RBP13.66□□□□□ -0.22
SNF8-210ENST00000511214 BICRAQ9NZM4 1560 aa13.66□□□□□ -0.22
SNF8-210ENST00000511214 UBTFP17480 764 aaKnown RBP13.65□□□□□ -0.22
SNF8-210ENST00000511214 VPS8Q8N3P4 1428 aa13.63□□□□□ -0.23
SNF8-210ENST00000511214 MYT1Q01538 1121 aa13.62□□□□□ -0.23
SNF8-210ENST00000511214 SYNJ1O43426 1573 aa13.61□□□□□ -0.23
SNF8-210ENST00000511214 CLIP1P30622 1438 aa13.6□□□□□ -0.23
SNF8-210ENST00000511214 ATAD2BQ9ULI0 1458 aa13.56□□□□□ -0.24
SNF8-210ENST00000511214 GTF3C3Q9Y5Q9 886 aa13.56□□□□□ -0.24
SNF8-210ENST00000511214 CLSPNQ9HAW4 1339 aa13.56□□□□□ -0.24
SNF8-210ENST00000511214 ERICH3Q5RHP9 1530 aa13.53□□□□□ -0.24
SNF8-210ENST00000511214 TOP2BQ02880 1626 aa13.53□□□□□ -0.24
SNF8-210ENST00000511214 POTEDQ86YR6 584 aa13.52□□□□□ -0.25
SNF8-210ENST00000511214 BIVM-ERCC5R4GMW8 1640 aa13.5□□□□□ -0.25
SNF8-210ENST00000511214 APLP2Q06481 763 aa13.49□□□□□ -0.25
SNF8-210ENST00000511214 RAPGEF2Q9Y4G8 1499 aa13.48□□□□□ -0.25
SNF8-210ENST00000511214 TTBK1Q5TCY1 1321 aaPredicted RBP13.46□□□□□ -0.25
SNF8-210ENST00000511214 PRXQ9BXM0 1461 aa13.44□□□□□ -0.26
SNF8-210ENST00000511214 HNRNPUL2Q1KMD3 747 aaKnown RBP13.4□□□□□ -0.26
SNF8-210ENST00000511214 PABPN1Q86U42 306 aaKnown RBP eCLIP13.4□□□□□ -0.26
SNF8-210ENST00000511214 CUX2O14529 1486 aa13.4□□□□□ -0.26
SNF8-210ENST00000511214 HMGXB3Q12766 1538 aa13.39□□□□□ -0.27
SNF8-210ENST00000511214 ARAP1Q96P48 1450 aa13.37□□□□□ -0.27
SNF8-210ENST00000511214 MIER1Q8N108 512 aa13.37□□□□□ -0.27
SNF8-210ENST00000511214 RRBP1Q9P2E9 1410 aaKnown RBP13.37□□□□□ -0.27
SNF8-210ENST00000511214 DHX57Q6P158 1386 aaKnown RBP13.35□□□□□ -0.27
SNF8-210ENST00000511214 MSH5O43196 834 aa13.34□□□□□ -0.27
SNF8-210ENST00000511214 NCAPD3P42695 1498 aa13.33□□□□□ -0.28
SNF8-210ENST00000511214 KIF27Q86VH2 1401 aa13.32□□□□□ -0.28
SNF8-210ENST00000511214 MAP3K1Q13233 1512 aa13.3□□□□□ -0.28
SNF8-210ENST00000511214 CUX1P39880 1505 aa13.27□□□□□ -0.29
SNF8-210ENST00000511214 CFTRP13569 1480 aa13.25□□□□□ -0.29
SNF8-210ENST00000511214 YTHDC1Q96MU7 727 aaKnown RBP13.25□□□□□ -0.29
SNF8-210ENST00000511214 CCNB3Q8WWL7 1395 aa13.23□□□□□ -0.29
SNF8-210ENST00000511214 ARHGAP35Q9NRY4 1499 aa13.22□□□□□ -0.29
SNF8-210ENST00000511214 PRDM2Q13029 1718 aa13.21□□□□□ -0.3
SNF8-210ENST00000511214 KANK4Q5T7N3 995 aaPredicted RBP13.19□□□□□ -0.3
SNF8-210ENST00000511214 TIAM1Q13009 1591 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 1076.9 ms