RNA–Protein interactions for RNA: ENST00000510003.5

SNCAIP-214, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,039 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-214ENST00000510003 ZNF644Q9H582 1327 aaPredicted RBP19.41■□□□□ 0.7
SNCAIP-214ENST00000510003 DISP1Q96F81 1524 aa19.4■□□□□ 0.7
SNCAIP-214ENST00000510003 POLR3GLQ9BT43 218 aa19.39■□□□□ 0.69
SNCAIP-214ENST00000510003 TROQ12816 1431 aaPredicted RBP19.39■□□□□ 0.69
SNCAIP-214ENST00000510003 EXOC6Q8TAG9 804 aa19.38■□□□□ 0.69
SNCAIP-214ENST00000510003 ANKRD30AQ9BXX3 1397 aa19.38■□□□□ 0.69
SNCAIP-214ENST00000510003 ADCY10Q96PN6 1610 aa19.38■□□□□ 0.69
SNCAIP-214ENST00000510003 PKD2Q13563 968 aa19.37■□□□□ 0.69
SNCAIP-214ENST00000510003 KDM5DQ9BY66 1539 aa19.37■□□□□ 0.69
SNCAIP-214ENST00000510003 WASHC2CQ9Y4E1 1318 aa19.37■□□□□ 0.69
SNCAIP-214ENST00000510003 CARMIL2Q6F5E8 1435 aa19.37■□□□□ 0.69
SNCAIP-214ENST00000510003 DDRGK1Q96HY6 314 aa19.36■□□□□ 0.69
SNCAIP-214ENST00000510003 CARD11Q9BXL7 1154 aa19.36■□□□□ 0.69
SNCAIP-214ENST00000510003 NLRP13Q86W25 1043 aa19.35■□□□□ 0.69
SNCAIP-214ENST00000510003 PARD3Q8TEW0 1356 aa19.34■□□□□ 0.69
SNCAIP-214ENST00000510003 NEFMP07197 916 aa19.34■□□□□ 0.69
SNCAIP-214ENST00000510003 RIMBP3CA6NJZ7 1639 aa19.34■□□□□ 0.69
SNCAIP-214ENST00000510003 RIMBP3BA6NNM3 1639 aa19.34■□□□□ 0.69
SNCAIP-214ENST00000510003 RIMBP3Q9UFD9 1639 aa19.34■□□□□ 0.69
SNCAIP-214ENST00000510003 GPATCH8Q9UKJ3 1502 aaKnown RBP19.34■□□□□ 0.69
SNCAIP-214ENST00000510003 ZNF326Q5BKZ1 582 aaKnown RBP19.34■□□□□ 0.69
SNCAIP-214ENST00000510003 ANKRD50Q9ULJ7 1429 aa19.33■□□□□ 0.69
SNCAIP-214ENST00000510003 SHANK2Q9UPX8 1470 aa19.33■□□□□ 0.69
SNCAIP-214ENST00000510003 CFDP1Q9UEE9 299 aaPredicted RBP19.33■□□□□ 0.68
SNCAIP-214ENST00000510003 NPM2Q86SE8 214 aaKnown RBP19.31■□□□□ 0.68
SNCAIP-214ENST00000510003 PLEKHH2Q8IVE3 1493 aa19.31■□□□□ 0.68
SNCAIP-214ENST00000510003 PRKCSHP14314 528 aaPredicted RBP19.3■□□□□ 0.68
SNCAIP-214ENST00000510003 CNGB1Q14028 1251 aaPredicted RBP19.3■□□□□ 0.68
SNCAIP-214ENST00000510003 ARID3CA6NKF2 412 aa19.29■□□□□ 0.68
SNCAIP-214ENST00000510003 CYB5RLQ6IPT4 315 aa19.29■□□□□ 0.68
SNCAIP-214ENST00000510003 ST20-MTHFSA0A0A6YYL1 179 aa19.29■□□□□ 0.68
SNCAIP-214ENST00000510003 PTPRGP23470 1445 aa19.28■□□□□ 0.68
SNCAIP-214ENST00000510003 BLMP54132 1417 aaPredicted RBP19.28■□□□□ 0.68
SNCAIP-214ENST00000510003 LAS1LQ9Y4W2 734 aaKnown RBP19.25■□□□□ 0.67
SNCAIP-214ENST00000510003 IL27Q8NEV9 243 aa19.25■□□□□ 0.67
SNCAIP-214ENST00000510003 NUP155O75694 1391 aa19.24■□□□□ 0.67
SNCAIP-214ENST00000510003 LAMC1P11047 1609 aa19.23■□□□□ 0.67
SNCAIP-214ENST00000510003 ANO8Q9HCE9 1232 aaPredicted RBP19.22■□□□□ 0.67
SNCAIP-214ENST00000510003 TRPM1Q7Z4N2 1603 aa19.21■□□□□ 0.67
SNCAIP-214ENST00000510003 C9orf84Q5VXU9 1444 aa19.2■□□□□ 0.66
SNCAIP-214ENST00000510003 PER1O15534 1290 aaPredicted RBP19.2■□□□□ 0.66
SNCAIP-214ENST00000510003 CDC42BPAQ5VT25 1732 aa19.19■□□□□ 0.66
SNCAIP-214ENST00000510003 SENP3-EIF4A1A0A087X0R7 540 aa19.19■□□□□ 0.66
SNCAIP-214ENST00000510003 GPRASP1Q5JY77 1395 aa19.19■□□□□ 0.66
SNCAIP-214ENST00000510003 COL17A1Q9UMD9 1497 aaPredicted RBP19.18■□□□□ 0.66
SNCAIP-214ENST00000510003 SALL2Q9Y467 1007 aaPredicted RBP19.18■□□□□ 0.66
SNCAIP-214ENST00000510003 PRAG1Q86YV5 1406 aa19.18■□□□□ 0.66
SNCAIP-214ENST00000510003 PLB1Q6P1J6 1458 aa19.17■□□□□ 0.66
SNCAIP-214ENST00000510003 GSE1Q14687 1217 aa19.17■□□□□ 0.66
SNCAIP-214ENST00000510003 DCAF11Q8TEB1 546 aa19.17■□□□□ 0.66
SNCAIP-214ENST00000510003 CRBNQ96SW2 442 aa19.16■□□□□ 0.66
SNCAIP-214ENST00000510003 KDM2BQ8NHM5 1336 aa19.16■□□□□ 0.66
SNCAIP-214ENST00000510003 CDCA7LQ96GN5 454 aa19.15■□□□□ 0.66
SNCAIP-214ENST00000510003 ARHGEF5Q12774 1597 aa19.15■□□□□ 0.66
SNCAIP-214ENST00000510003 CENPQQ7L2Z9 268 aaPredicted RBP19.15■□□□□ 0.66
SNCAIP-214ENST00000510003 ZNF777Q9ULD5 760 aaPredicted RBP19.14■□□□□ 0.65
SNCAIP-214ENST00000510003 KDM2AQ9Y2K7 1162 aa19.13■□□□□ 0.65
SNCAIP-214ENST00000510003 ABCC10Q5T3U5 1492 aa19.13■□□□□ 0.65
SNCAIP-214ENST00000510003 PRDM15P57071 1507 aaPredicted RBP19.13■□□□□ 0.65
SNCAIP-214ENST00000510003 NFKBIBQ15653 356 aa19.12■□□□□ 0.65
SNCAIP-214ENST00000510003 ABCA8O94911 1581 aa19.11■□□□□ 0.65
SNCAIP-214ENST00000510003 EIF2AK4Q9P2K8 1649 aaKnown RBP19.1■□□□□ 0.65
SNCAIP-214ENST00000510003 DAXXQ9UER7 740 aaPredicted RBP19.1■□□□□ 0.65
SNCAIP-214ENST00000510003 TSPY4P0CV99 314 aa19.1■□□□□ 0.65
SNCAIP-214ENST00000510003 TSPY10P0CW01 314 aa19.1■□□□□ 0.65
SNCAIP-214ENST00000510003 FAM135AQ9P2D6 1515 aa19.09■□□□□ 0.65
SNCAIP-214ENST00000510003 PLIN1O60240 522 aa19.09■□□□□ 0.65
SNCAIP-214ENST00000510003 FAM161AQ3B820 660 aa19.09■□□□□ 0.65
SNCAIP-214ENST00000510003 CCDC144AA2RUR9 1427 aa19.08■□□□□ 0.64
SNCAIP-214ENST00000510003 ABCC2Q92887 1545 aa19.07■□□□□ 0.64
SNCAIP-214ENST00000510003 RTN4Q9NQC3 1192 aaKnown RBP19.07■□□□□ 0.64
SNCAIP-214ENST00000510003 UHRF1BP1LA0JNW5 1464 aa19.06■□□□□ 0.64
SNCAIP-214ENST00000510003 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.06■□□□□ 0.64
SNCAIP-214ENST00000510003 ERBINQ96RT1 1412 aa19.05■□□□□ 0.64
SNCAIP-214ENST00000510003 TESK2Q96S53 571 aa19.05■□□□□ 0.64
SNCAIP-214ENST00000510003 PLEKHD1A6NEE1 506 aa19.03■□□□□ 0.64
SNCAIP-214ENST00000510003 NPM1P06748 294 aaKnown RBP eCLIP19.03■□□□□ 0.64
SNCAIP-214ENST00000510003 C8orf34Q49A92 452 aa19.03■□□□□ 0.64
SNCAIP-214ENST00000510003 EIF3AQ14152 1382 aaKnown RBP19.03■□□□□ 0.64
SNCAIP-214ENST00000510003 DISP3Q9P2K9 1392 aa19.03■□□□□ 0.64
SNCAIP-214ENST00000510003 A2MP01023 1474 aa19.03■□□□□ 0.64
SNCAIP-214ENST00000510003 UNC13BO14795 1591 aa19.02■□□□□ 0.64
SNCAIP-214ENST00000510003 CCDC141Q6ZP82 1450 aa19.02■□□□□ 0.64
SNCAIP-214ENST00000510003 TMF1P82094 1093 aa19.02■□□□□ 0.64
SNCAIP-214ENST00000510003 RSPH4AQ5TD94 716 aa19.01■□□□□ 0.63
SNCAIP-214ENST00000510003 PANK3Q9H999 370 aa19.01■□□□□ 0.63
SNCAIP-214ENST00000510003 CC2D1BQ5T0F9 858 aaKnown RBP19.01■□□□□ 0.63
SNCAIP-214ENST00000510003 FRAT1Q92837 279 aaPredicted RBP19.01■□□□□ 0.63
SNCAIP-214ENST00000510003 ZNF521Q96K83 1311 aa19.01■□□□□ 0.63
SNCAIP-214ENST00000510003 ATP10BO94823 1461 aa19.01■□□□□ 0.63
SNCAIP-214ENST00000510003 DUSP27Q5VZP5 1158 aa19■□□□□ 0.63
SNCAIP-214ENST00000510003 BRPF3Q9ULD4 1205 aa19■□□□□ 0.63
SNCAIP-214ENST00000510003 C20orf194Q5TEA3 1177 aa19■□□□□ 0.63
SNCAIP-214ENST00000510003 NBPF1Q3BBV0 1214 aa18.98■□□□□ 0.63
SNCAIP-214ENST00000510003 RNF17Q9BXT8 1623 aaKnown RBP18.98■□□□□ 0.63
SNCAIP-214ENST00000510003 MAST1Q9Y2H9 1570 aa18.98■□□□□ 0.63
SNCAIP-214ENST00000510003 ATP10AO60312 1499 aa18.97■□□□□ 0.63
SNCAIP-214ENST00000510003 PLA2R1Q13018 1463 aa18.97■□□□□ 0.63
SNCAIP-214ENST00000510003 GOLGA2Q08379 1002 aa18.96■□□□□ 0.63
SNCAIP-214ENST00000510003 SKAP1Q86WV1 359 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms