RNA–Protein interactions for RNA: ENST00000510003.5

SNCAIP-214, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,039 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-214ENST00000510003 NISCHQ9Y2I1 1504 aa28.79■■■□□ 2.2
SNCAIP-214ENST00000510003 CCDC180Q9P1Z9 1646 aa25.02■■□□□ 1.6
SNCAIP-214ENST00000510003 SHROOM4Q9ULL8 1493 aa24.66■■□□□ 1.54
SNCAIP-214ENST00000510003 ZCCHC6Q5VYS8 1495 aaKnown RBP24.5■■□□□ 1.51
SNCAIP-214ENST00000510003 SUPT5HO00267 1087 aaKnown RBP24.47■■□□□ 1.51
SNCAIP-214ENST00000510003 HRCP23327 699 aa24.44■■□□□ 1.5
SNCAIP-214ENST00000510003 ABCC9O60706 1549 aa24.27■■□□□ 1.48
SNCAIP-214ENST00000510003 MYO15BQ96JP2 1530 aa24.2■■□□□ 1.46
SNCAIP-214ENST00000510003 CHIC1Q5VXU3 224 aa24.19■■□□□ 1.46
SNCAIP-214ENST00000510003 DCAF1Q9Y4B6 1507 aa23.94■■□□□ 1.42
SNCAIP-214ENST00000510003 PCGF6Q9BYE7 350 aa23.9■■□□□ 1.42
SNCAIP-214ENST00000510003 DCAF8L2P0C7V8 631 aa23.79■■□□□ 1.4
SNCAIP-214ENST00000510003 PPARGC1BQ86YN6 1023 aaKnown RBP23.6■■□□□ 1.37
SNCAIP-214ENST00000510003 TRIM26Q12899 539 aaPredicted RBP23.49■■□□□ 1.35
SNCAIP-214ENST00000510003 NACADO15069 1562 aa23.47■■□□□ 1.35
SNCAIP-214ENST00000510003 RB1CC1Q8TDY2 1594 aa23.41■■□□□ 1.34
SNCAIP-214ENST00000510003 LOC105371045A0A1W2PR82 267 aa23.36■■□□□ 1.33
SNCAIP-214ENST00000510003 ZEB1P37275 1124 aaPredicted RBP23.34■■□□□ 1.33
SNCAIP-214ENST00000510003 PELP1Q8IZL8 1130 aaKnown RBP23.28■■□□□ 1.32
SNCAIP-214ENST00000510003 SCRIBQ14160 1630 aa22.97■■□□□ 1.27
SNCAIP-214ENST00000510003 RSF1Q96T23 1441 aaPredicted RBP22.96■■□□□ 1.27
SNCAIP-214ENST00000510003 UNC13AQ9UPW8 1703 aa22.93■■□□□ 1.26
SNCAIP-214ENST00000510003 TRIM41Q8WV44 630 aa22.86■■□□□ 1.25
SNCAIP-214ENST00000510003 PABPN1Q86U42 306 aaKnown RBP eCLIP22.82■■□□□ 1.24
SNCAIP-214ENST00000510003 SCAF1Q9H7N4 1312 aaKnown RBP22.77■■□□□ 1.24
SNCAIP-214ENST00000510003 BICRAQ9NZM4 1560 aa22.74■■□□□ 1.23
SNCAIP-214ENST00000510003 FAM9AQ8IZU1 332 aaPredicted RBP22.53■■□□□ 1.2
SNCAIP-214ENST00000510003 ACIN1Q9UKV3 1341 aaKnown RBP22.46■■□□□ 1.19
SNCAIP-214ENST00000510003 MYT1Q01538 1121 aa22.37■■□□□ 1.17
SNCAIP-214ENST00000510003 MROH2BQ7Z745 1585 aa22.34■■□□□ 1.17
SNCAIP-214ENST00000510003 CCER1Q8TC90 406 aaPredicted RBP22.32■■□□□ 1.16
SNCAIP-214ENST00000510003 EIF4G1Q04637 1599 aaKnown RBP22.3■■□□□ 1.16
SNCAIP-214ENST00000510003 CECR2Q9BXF3 1484 aa22.3■■□□□ 1.16
SNCAIP-214ENST00000510003 CENPBP07199 599 aaPredicted RBP22.3■■□□□ 1.16
SNCAIP-214ENST00000510003 WRNQ14191 1432 aaPredicted RBP eCLIP22.29■■□□□ 1.16
SNCAIP-214ENST00000510003 NEUROD1Q13562 356 aa22.28■■□□□ 1.16
SNCAIP-214ENST00000510003 BAZ1AQ9NRL2 1556 aaPredicted RBP22.27■■□□□ 1.16
SNCAIP-214ENST00000510003 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.26■■□□□ 1.15
SNCAIP-214ENST00000510003 WIZO95785 1651 aa22.23■■□□□ 1.15
SNCAIP-214ENST00000510003 DIEXFQ68CQ4 756 aaKnown RBP22.23■■□□□ 1.15
SNCAIP-214ENST00000510003 EHMT2Q96KQ7 1210 aa22.19■■□□□ 1.14
SNCAIP-214ENST00000510003 GTF3C3Q9Y5Q9 886 aa22.13■■□□□ 1.13
SNCAIP-214ENST00000510003 CEP162Q5TB80 1403 aa22.04■■□□□ 1.12
SNCAIP-214ENST00000510003 TNIKQ9UKE5 1360 aa22.03■■□□□ 1.12
SNCAIP-214ENST00000510003 EEA1Q15075 1411 aa22.02■■□□□ 1.12
SNCAIP-214ENST00000510003 DNAJC5BQ9UF47 199 aa22.01■■□□□ 1.11
SNCAIP-214ENST00000510003 TOP2AP11388 1531 aaKnown RBP22.01■■□□□ 1.11
SNCAIP-214ENST00000510003 SMARCA4P51532 1647 aa21.97■■□□□ 1.11
SNCAIP-214ENST00000510003 ZNF316A6NFI3 1004 aaPredicted RBP21.97■■□□□ 1.11
SNCAIP-214ENST00000510003 CCDC88BA6NC98 1476 aa21.94■■□□□ 1.1
SNCAIP-214ENST00000510003 CC2D2AQ9P2K1 1620 aa21.92■■□□□ 1.1
SNCAIP-214ENST00000510003 ABCC8Q09428 1581 aa21.89■■□□□ 1.09
SNCAIP-214ENST00000510003 SMARCA2P51531 1590 aa21.86■■□□□ 1.09
SNCAIP-214ENST00000510003 SOGA1O94964 1423 aa21.81■■□□□ 1.08
SNCAIP-214ENST00000510003 GOLGA3Q08378 1498 aa21.8■■□□□ 1.08
SNCAIP-214ENST00000510003 CSRNP3Q8WYN3 585 aa21.79■■□□□ 1.08
SNCAIP-214ENST00000510003 ATAD2BQ9ULI0 1458 aa21.78■■□□□ 1.08
SNCAIP-214ENST00000510003 PEG3Q9GZU2 1588 aa21.71■■□□□ 1.07
SNCAIP-214ENST00000510003 NCAPD3P42695 1498 aa21.69■■□□□ 1.06
SNCAIP-214ENST00000510003 TTBK1Q5TCY1 1321 aaPredicted RBP21.67■■□□□ 1.06
SNCAIP-214ENST00000510003 UBTFP17480 764 aaKnown RBP21.67■■□□□ 1.06
SNCAIP-214ENST00000510003 KIF21BO75037 1637 aa21.65■■□□□ 1.06
SNCAIP-214ENST00000510003 RUSC2Q8N2Y8 1516 aa21.64■■□□□ 1.05
SNCAIP-214ENST00000510003 CEP164Q9UPV0 1460 aa21.63■■□□□ 1.05
SNCAIP-214ENST00000510003 CLSPNQ9HAW4 1339 aa21.62■■□□□ 1.05
SNCAIP-214ENST00000510003 MIER1Q8N108 512 aa21.62■■□□□ 1.05
SNCAIP-214ENST00000510003 BAZ1BQ9UIG0 1483 aaKnown RBP21.61■■□□□ 1.05
SNCAIP-214ENST00000510003 YTHDC1Q96MU7 727 aaKnown RBP21.57■■□□□ 1.04
SNCAIP-214ENST00000510003 HMGXB3Q12766 1538 aa21.57■■□□□ 1.04
SNCAIP-214ENST00000510003 VPS8Q8N3P4 1428 aa21.55■■□□□ 1.04
SNCAIP-214ENST00000510003 CLIP1P30622 1438 aa21.51■■□□□ 1.03
SNCAIP-214ENST00000510003 HNRNPUL2Q1KMD3 747 aaKnown RBP21.46■■□□□ 1.03
SNCAIP-214ENST00000510003 SYNJ1O43426 1573 aa21.4■■□□□ 1.02
SNCAIP-214ENST00000510003 APLP2Q06481 763 aa21.39■■□□□ 1.01
SNCAIP-214ENST00000510003 RAPGEF2Q9Y4G8 1499 aa21.29■■□□□ 1
SNCAIP-214ENST00000510003 DHX57Q6P158 1386 aaKnown RBP21.28■■□□□ 1
SNCAIP-214ENST00000510003 SUPT16HQ9Y5B9 1047 aaKnown RBP21.23■□□□□ 0.99
SNCAIP-214ENST00000510003 ERICH3Q5RHP9 1530 aa21.22■□□□□ 0.99
SNCAIP-214ENST00000510003 CUX2O14529 1486 aa21.19■□□□□ 0.98
SNCAIP-214ENST00000510003 TOP2BQ02880 1626 aa21.18■□□□□ 0.98
SNCAIP-214ENST00000510003 RRBP1Q9P2E9 1410 aaKnown RBP21.15■□□□□ 0.98
SNCAIP-214ENST00000510003 NESP48681 1621 aa21.13■□□□□ 0.97
SNCAIP-214ENST00000510003 ARAP1Q96P48 1450 aa21.12■□□□□ 0.97
SNCAIP-214ENST00000510003 BIVM-ERCC5R4GMW8 1640 aa21.11■□□□□ 0.97
SNCAIP-214ENST00000510003 PRXQ9BXM0 1461 aa21.11■□□□□ 0.97
SNCAIP-214ENST00000510003 CADPSQ9ULU8 1353 aa21.11■□□□□ 0.97
SNCAIP-214ENST00000510003 CFTRP13569 1480 aa21.05■□□□□ 0.96
SNCAIP-214ENST00000510003 TSHZ2Q9NRE2 1034 aa21.03■□□□□ 0.96
SNCAIP-214ENST00000510003 LAMC3Q9Y6N6 1575 aa21.03■□□□□ 0.96
SNCAIP-214ENST00000510003 ANP32EQ9BTT0 268 aa20.98■□□□□ 0.95
SNCAIP-214ENST00000510003 CCNB3Q8WWL7 1395 aa20.97■□□□□ 0.95
SNCAIP-214ENST00000510003 KANK4Q5T7N3 995 aaPredicted RBP20.96■□□□□ 0.95
SNCAIP-214ENST00000510003 PDS5BQ9NTI5 1447 aa20.91■□□□□ 0.94
SNCAIP-214ENST00000510003 RANGAP1P46060 587 aaPredicted RBP20.9■□□□□ 0.94
SNCAIP-214ENST00000510003 MAP3K1Q13233 1512 aa20.89■□□□□ 0.93
SNCAIP-214ENST00000510003 KIF27Q86VH2 1401 aa20.87■□□□□ 0.93
SNCAIP-214ENST00000510003 MAPKBP1O60336 1514 aa20.86■□□□□ 0.93
SNCAIP-214ENST00000510003 FANCD2Q9BXW9 1451 aa20.86■□□□□ 0.93
SNCAIP-214ENST00000510003 ERCC6Q03468 1493 aa20.85■□□□□ 0.93
SNCAIP-214ENST00000510003 PRDM2Q13029 1718 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms