RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 PHF23Q9BUL5 403 aaPredicted RBP28.84■■■□□ 2.21
UBE3D-207ENST00000509102 DAPK1P53355 1430 aa28.84■■■□□ 2.21
UBE3D-207ENST00000509102 DUOX2Q9NRD8 1548 aa28.84■■■□□ 2.21
UBE3D-207ENST00000509102 CROCC2H7BZ55 1655 aa28.83■■■□□ 2.21
UBE3D-207ENST00000509102 PTPRKQ15262 1439 aa28.83■■■□□ 2.21
UBE3D-207ENST00000509102 DNMT1P26358 1616 aaKnown RBP28.83■■■□□ 2.21
UBE3D-207ENST00000509102 EIF2AK4Q9P2K8 1649 aaKnown RBP28.83■■■□□ 2.21
UBE3D-207ENST00000509102 KIF15Q9NS87 1388 aa28.81■■■□□ 2.2
UBE3D-207ENST00000509102 FAM50AQ14320 339 aaKnown RBP28.79■■■□□ 2.2
UBE3D-207ENST00000509102 RRP7BPQ9NSQ0 103 aa28.78■■■□□ 2.2
UBE3D-207ENST00000509102 RNF17Q9BXT8 1623 aaKnown RBP28.78■■■□□ 2.2
UBE3D-207ENST00000509102 ANKRD30AQ9BXX3 1397 aa28.76■■■□□ 2.2
UBE3D-207ENST00000509102 ERBINQ96RT1 1412 aa28.76■■■□□ 2.19
UBE3D-207ENST00000509102 MYO3AQ8NEV4 1616 aa28.76■■■□□ 2.19
UBE3D-207ENST00000509102 PZPP20742 1482 aa28.75■■■□□ 2.19
UBE3D-207ENST00000509102 ILDR1Q86SU0 546 aaPredicted RBP28.73■■■□□ 2.19
UBE3D-207ENST00000509102 CHIC2Q9UKJ5 165 aa28.73■■■□□ 2.19
UBE3D-207ENST00000509102 ZC3H13Q5T200 1668 aaKnown RBP28.73■■■□□ 2.19
UBE3D-207ENST00000509102 CEP170BQ9Y4F5 1589 aaPredicted RBP28.71■■■□□ 2.19
UBE3D-207ENST00000509102 ZNF142P52746 1687 aaPredicted RBP28.71■■■□□ 2.19
UBE3D-207ENST00000509102 TNRQ92752 1358 aa28.71■■■□□ 2.19
UBE3D-207ENST00000509102 STRCQ7RTU9 1775 aa28.7■■■□□ 2.19
UBE3D-207ENST00000509102 NCOA1Q15788 1441 aa28.69■■■□□ 2.18
UBE3D-207ENST00000509102 CAMSAP1Q5T5Y3 1602 aa28.69■■■□□ 2.18
UBE3D-207ENST00000509102 ABCC3O15438 1527 aa28.69■■■□□ 2.18
UBE3D-207ENST00000509102 FBXO31Q5XUX0 539 aaPredicted RBP28.68■■■□□ 2.18
UBE3D-207ENST00000509102 A2ML1A8K2U0 1454 aa28.66■■■□□ 2.18
UBE3D-207ENST00000509102 PTPRTO14522 1441 aa28.66■■■□□ 2.18
UBE3D-207ENST00000509102 KANK1Q14678 1352 aa28.65■■■□□ 2.18
UBE3D-207ENST00000509102 MROH1Q8NDA8 1641 aa28.63■■■□□ 2.17
UBE3D-207ENST00000509102 ADGRL2O95490 1459 aa28.63■■■□□ 2.17
UBE3D-207ENST00000509102 PLA2R1Q13018 1463 aa28.63■■■□□ 2.17
UBE3D-207ENST00000509102 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.62■■■□□ 2.17
UBE3D-207ENST00000509102 PRDM15P57071 1507 aaPredicted RBP28.62■■■□□ 2.17
UBE3D-207ENST00000509102 PKD2Q13563 968 aa28.61■■■□□ 2.17
UBE3D-207ENST00000509102 FBXO41Q8TF61 875 aa28.61■■■□□ 2.17
UBE3D-207ENST00000509102 NLRP1Q9C000 1473 aa28.6■■■□□ 2.17
UBE3D-207ENST00000509102 CEP152O94986 1710 aa28.58■■■□□ 2.17
UBE3D-207ENST00000509102 PPARGC1BQ86YN6 1023 aaKnown RBP28.58■■■□□ 2.17
UBE3D-207ENST00000509102 DEPDC5O75140 1603 aa28.56■■■□□ 2.16
UBE3D-207ENST00000509102 CERKQ8TCT0 537 aa28.56■■■□□ 2.16
UBE3D-207ENST00000509102 NCKAP5LQ9HCH0 1330 aa28.56■■■□□ 2.16
UBE3D-207ENST00000509102 THEMISQ8N1K5 641 aaPredicted RBP28.54■■■□□ 2.16
UBE3D-207ENST00000509102 SPATA31D1Q6ZQQ2 1576 aa28.54■■■□□ 2.16
UBE3D-207ENST00000509102 ERVK-7P63135 1459 aa28.53■■■□□ 2.16
UBE3D-207ENST00000509102 ARHGAP31Q2M1Z3 1444 aa28.52■■■□□ 2.16
UBE3D-207ENST00000509102 ANKRD50Q9ULJ7 1429 aa28.52■■■□□ 2.16
UBE3D-207ENST00000509102 UGGT1Q9NYU2 1555 aa28.51■■■□□ 2.15
UBE3D-207ENST00000509102 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.5■■■□□ 2.15
UBE3D-207ENST00000509102 ROCK1Q13464 1354 aa28.48■■■□□ 2.15
UBE3D-207ENST00000509102 ITGAEP38570 1179 aa28.46■■■□□ 2.15
UBE3D-207ENST00000509102 ANKLE2Q86XL3 938 aa28.46■■■□□ 2.15
UBE3D-207ENST00000509102 LMTK2Q8IWU2 1503 aa28.45■■■□□ 2.15
UBE3D-207ENST00000509102 CFAP65Q6ZU64 1925 aaKnown RBP28.43■■■□□ 2.14
UBE3D-207ENST00000509102 VWDEQ8N2E2 1590 aa28.42■■■□□ 2.14
UBE3D-207ENST00000509102 POLR1AO95602 1720 aaPredicted RBP28.42■■■□□ 2.14
UBE3D-207ENST00000509102 EFCAB6Q5THR3 1501 aa28.38■■■□□ 2.13
UBE3D-207ENST00000509102 STAG3Q9UJ98 1225 aa28.36■■■□□ 2.13
UBE3D-207ENST00000509102 LTBP4Q8N2S1 1624 aa28.35■■■□□ 2.13
UBE3D-207ENST00000509102 RRBP1Q9P2E9 1410 aaKnown RBP28.35■■■□□ 2.13
UBE3D-207ENST00000509102 ZNF335Q9H4Z2 1342 aaPredicted RBP28.34■■■□□ 2.13
UBE3D-207ENST00000509102 RPRD2Q5VT52 1461 aaKnown RBP28.33■■■□□ 2.13
UBE3D-207ENST00000509102 NEURL4Q96JN8 1562 aa28.33■■■□□ 2.12
UBE3D-207ENST00000509102 UNC13BO14795 1591 aa28.32■■■□□ 2.12
UBE3D-207ENST00000509102 UBR1Q8IWV7 1749 aa28.32■■■□□ 2.12
UBE3D-207ENST00000509102 NPHP4O75161 1426 aaPredicted RBP28.31■■■□□ 2.12
UBE3D-207ENST00000509102 IQSEC2Q5JU85 1478 aa28.31■■■□□ 2.12
UBE3D-207ENST00000509102 MED14O60244 1454 aa28.29■■■□□ 2.12
UBE3D-207ENST00000509102 TET3O43151 1660 aa28.29■■■□□ 2.12
UBE3D-207ENST00000509102 EID1Q9Y6B2 187 aa28.28■■■□□ 2.12
UBE3D-207ENST00000509102 NOS1P29475 1434 aa28.27■■■□□ 2.12
UBE3D-207ENST00000509102 SLC52A1Q9NWF4 448 aa28.27■■■□□ 2.12
UBE3D-207ENST00000509102 PIK3C2BO00750 1634 aa28.26■■■□□ 2.11
UBE3D-207ENST00000509102 IQGAP1P46940 1657 aa28.24■■■□□ 2.11
UBE3D-207ENST00000509102 GCC2Q8IWJ2 1684 aa28.24■■■□□ 2.11
UBE3D-207ENST00000509102 SCAF11Q99590 1463 aaKnown RBP28.24■■■□□ 2.11
UBE3D-207ENST00000509102 IDI1Q13907 227 aa28.24■■■□□ 2.11
UBE3D-207ENST00000509102 NUP155O75694 1391 aa28.24■■■□□ 2.11
UBE3D-207ENST00000509102 TXNDC2Q86VQ3 553 aa28.23■■■□□ 2.11
UBE3D-207ENST00000509102 SYNMO15061 1565 aa28.23■■■□□ 2.11
UBE3D-207ENST00000509102 SLIT1O75093 1534 aa28.23■■■□□ 2.11
UBE3D-207ENST00000509102 KDM5AP29375 1690 aaKnown RBP28.23■■■□□ 2.11
UBE3D-207ENST00000509102 ARHGAP23Q9P227 1491 aa28.21■■■□□ 2.11
UBE3D-207ENST00000509102 IQGAP3Q86VI3 1631 aa28.21■■■□□ 2.11
UBE3D-207ENST00000509102 CPS1P31327 1500 aa28.2■■■□□ 2.1
UBE3D-207ENST00000509102 TMEM2Q9UHN6 1383 aa28.2■■■□□ 2.1
UBE3D-207ENST00000509102 ADGRB3O60242 1522 aa28.17■■■□□ 2.1
UBE3D-207ENST00000509102 LTKP29376 864 aa28.15■■■□□ 2.1
UBE3D-207ENST00000509102 E9PCH4 1651 aa28.13■■■□□ 2.09
UBE3D-207ENST00000509102 UBAP1LF5GYI3 381 aa28.11■■■□□ 2.09
UBE3D-207ENST00000509102 HDGFP51858 240 aaKnown RBP28.11■■■□□ 2.09
UBE3D-207ENST00000509102 NAIPQ13075 1403 aa28.1■■■□□ 2.09
UBE3D-207ENST00000509102 CHGAP10645 457 aaKnown RBP28.07■■■□□ 2.08
UBE3D-207ENST00000509102 HFM1A2PYH4 1435 aa28.07■■■□□ 2.08
UBE3D-207ENST00000509102 BCANQ96GW7 911 aa28.05■■■□□ 2.08
UBE3D-207ENST00000509102 PPP1R15AO75807 674 aaPredicted RBP28.04■■■□□ 2.08
UBE3D-207ENST00000509102 TOM1O60784 492 aa28.02■■■□□ 2.08
UBE3D-207ENST00000509102 TRIM52Q96A61 297 aa28.02■■■□□ 2.08
UBE3D-207ENST00000509102 TMEM131LA2VDJ0 1609 aa28.01■■■□□ 2.07
UBE3D-207ENST00000509102 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms