RNA–Protein interactions for RNA: ENST00000508660.5

ATP2C1-215, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 5

Gene ATP2C1, Length 943 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-215ENST00000508660 ATP10AO60312 1499 aa12.21□□□□□ -0.46
ATP2C1-215ENST00000508660 GOLGA3Q08378 1498 aa12.21□□□□□ -0.46
ATP2C1-215ENST00000508660 SUPT5HO00267 1087 aaKnown RBP12.2□□□□□ -0.46
ATP2C1-215ENST00000508660 LHX8Q68G74 356 aa12.2□□□□□ -0.46
ATP2C1-215ENST00000508660 C3P01024 1663 aa12.18□□□□□ -0.46
ATP2C1-215ENST00000508660 PELP1Q8IZL8 1130 aaKnown RBP12.17□□□□□ -0.46
ATP2C1-215ENST00000508660 ZBTB47Q9UFB7 747 aaPredicted RBP12.17□□□□□ -0.46
ATP2C1-215ENST00000508660 CAMSAP1Q5T5Y3 1602 aa12.17□□□□□ -0.46
ATP2C1-215ENST00000508660 VASPP50552 380 aaPredicted RBP12.16□□□□□ -0.46
ATP2C1-215ENST00000508660 C9orf84Q5VXU9 1444 aa12.16□□□□□ -0.46
ATP2C1-215ENST00000508660 TRAPPC8Q9Y2L5 1435 aa12.16□□□□□ -0.46
ATP2C1-215ENST00000508660 MAP3K13O43283 966 aa12.15□□□□□ -0.46
ATP2C1-215ENST00000508660 P3H3Q8IVL6 736 aa12.15□□□□□ -0.46
ATP2C1-215ENST00000508660 CTTNBP2Q8WZ74 1663 aa12.14□□□□□ -0.47
ATP2C1-215ENST00000508660 TRPC6Q9Y210 931 aa12.14□□□□□ -0.47
ATP2C1-215ENST00000508660 TOM1O60784 492 aa12.13□□□□□ -0.47
ATP2C1-215ENST00000508660 SCAPERQ9BY12 1400 aa12.12□□□□□ -0.47
ATP2C1-215ENST00000508660 ASTLQ6HA08 431 aaPredicted RBP12.12□□□□□ -0.47
ATP2C1-215ENST00000508660 CFAP74Q9C0B2 1584 aa12.12□□□□□ -0.47
ATP2C1-215ENST00000508660 ALKQ9UM73 1620 aa12.11□□□□□ -0.47
ATP2C1-215ENST00000508660 ATMINO43313 823 aaPredicted RBP12.11□□□□□ -0.47
ATP2C1-215ENST00000508660 POTEAQ6S8J7 498 aa12.11□□□□□ -0.47
ATP2C1-215ENST00000508660 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.11□□□□□ -0.47
ATP2C1-215ENST00000508660 NUP153P49790 1475 aaKnown RBP12.08□□□□□ -0.48
ATP2C1-215ENST00000508660 POTEB2H3BUK9 544 aa12.07□□□□□ -0.48
ATP2C1-215ENST00000508660 PKD2Q13563 968 aa12.07□□□□□ -0.48
ATP2C1-215ENST00000508660 RAPGEF6Q8TEU7 1601 aa12.07□□□□□ -0.48
ATP2C1-215ENST00000508660 TCOF1Q13428 1488 aaKnown RBP12.07□□□□□ -0.48
ATP2C1-215ENST00000508660 PLEKHD1A6NEE1 506 aa12.06□□□□□ -0.48
ATP2C1-215ENST00000508660 FAM212AQ96EL1 285 aa12.05□□□□□ -0.48
ATP2C1-215ENST00000508660 ATN1P54259 1190 aaPredicted RBP12.04□□□□□ -0.48
ATP2C1-215ENST00000508660 FAM9AQ8IZU1 332 aaPredicted RBP12.04□□□□□ -0.48
ATP2C1-215ENST00000508660 AFAP1Q8N556 730 aa12.04□□□□□ -0.48
ATP2C1-215ENST00000508660 BMP2KQ9NSY1 1161 aaPredicted RBP12.04□□□□□ -0.48
ATP2C1-215ENST00000508660 PLA2R1Q13018 1463 aa12.03□□□□□ -0.48
ATP2C1-215ENST00000508660 SETD1AO15047 1707 aaKnown RBP12.03□□□□□ -0.48
ATP2C1-215ENST00000508660 PLCH2O75038 1416 aa12.03□□□□□ -0.48
ATP2C1-215ENST00000508660 DIP2CQ9Y2E4 1556 aa12.02□□□□□ -0.49
ATP2C1-215ENST00000508660 NPATQ14207 1427 aa12.02□□□□□ -0.49
ATP2C1-215ENST00000508660 ESF1Q9H501 851 aaKnown RBP12.01□□□□□ -0.49
ATP2C1-215ENST00000508660 CPS1P31327 1500 aa12.01□□□□□ -0.49
ATP2C1-215ENST00000508660 AGLP35573 1532 aa12.01□□□□□ -0.49
ATP2C1-215ENST00000508660 IFNLR1Q8IU57 520 aaPredicted RBP12□□□□□ -0.49
ATP2C1-215ENST00000508660 PCDHB13Q9Y5F0 798 aa12□□□□□ -0.49
ATP2C1-215ENST00000508660 PTPRKQ15262 1439 aa12□□□□□ -0.49
ATP2C1-215ENST00000508660 SHANK2Q9UPX8 1470 aa12□□□□□ -0.49
ATP2C1-215ENST00000508660 REREQ9P2R6 1566 aa12□□□□□ -0.49
ATP2C1-215ENST00000508660 DCAF8Q5TAQ9 597 aa11.99□□□□□ -0.49
ATP2C1-215ENST00000508660 IFNL1Q8IU54 200 aa11.99□□□□□ -0.49
ATP2C1-215ENST00000508660 KLHL34Q8N239 644 aa11.99□□□□□ -0.49
ATP2C1-215ENST00000508660 SGIP1Q9BQI5 828 aa11.99□□□□□ -0.49
ATP2C1-215ENST00000508660 ZMYM3Q14202 1370 aa11.98□□□□□ -0.49
ATP2C1-215ENST00000508660 TIE1P35590 1138 aa11.98□□□□□ -0.49
ATP2C1-215ENST00000508660 UPF1Q92900 1129 aaKnown RBP eCLIP11.98□□□□□ -0.49
ATP2C1-215ENST00000508660 METRNQ9UJH8 293 aa11.98□□□□□ -0.49
ATP2C1-215ENST00000508660 ABCA6Q8N139 1617 aa11.97□□□□□ -0.49
ATP2C1-215ENST00000508660 KDM5CP41229 1560 aa11.97□□□□□ -0.49
ATP2C1-215ENST00000508660 CNTLNQ9NXG0 1405 aa11.97□□□□□ -0.49
ATP2C1-215ENST00000508660 ZNF142P52746 1687 aaPredicted RBP11.97□□□□□ -0.49
ATP2C1-215ENST00000508660 SAMD9Q5K651 1589 aa11.96□□□□□ -0.49
ATP2C1-215ENST00000508660 ZNF518AQ6AHZ1 1483 aa11.96□□□□□ -0.49
ATP2C1-215ENST00000508660 PYGBP11216 843 aa11.96□□□□□ -0.49
ATP2C1-215ENST00000508660 EFCAB2Q5VUJ9 269 aa11.96□□□□□ -0.49
ATP2C1-215ENST00000508660 SUPT6HQ7KZ85 1726 aaKnown RBP11.96□□□□□ -0.49
ATP2C1-215ENST00000508660 CEP170BQ9Y4F5 1589 aaPredicted RBP11.96□□□□□ -0.5
ATP2C1-215ENST00000508660 TTLL13PA6NNM8 815 aa11.95□□□□□ -0.5
ATP2C1-215ENST00000508660 SLC39A7Q92504 469 aa11.95□□□□□ -0.5
ATP2C1-215ENST00000508660 MYT1LQ9UL68 1186 aa11.95□□□□□ -0.5
ATP2C1-215ENST00000508660 MYO3AQ8NEV4 1616 aa11.95□□□□□ -0.5
ATP2C1-215ENST00000508660 VWDEQ8N2E2 1590 aa11.94□□□□□ -0.5
ATP2C1-215ENST00000508660 C7P10643 843 aa11.94□□□□□ -0.5
ATP2C1-215ENST00000508660 PRXQ9BXM0 1461 aa11.94□□□□□ -0.5
ATP2C1-215ENST00000508660 POTEFA5A3E0 1075 aa11.93□□□□□ -0.5
ATP2C1-215ENST00000508660 POTEJP0CG39 1038 aa11.93□□□□□ -0.5
ATP2C1-215ENST00000508660 OTUD5Q96G74 571 aa11.93□□□□□ -0.5
ATP2C1-215ENST00000508660 MROH2AA6NES4 1674 aa11.93□□□□□ -0.5
ATP2C1-215ENST00000508660 NEURL4Q96JN8 1562 aa11.92□□□□□ -0.5
ATP2C1-215ENST00000508660 MLH3Q9UHC1 1453 aa11.92□□□□□ -0.5
ATP2C1-215ENST00000508660 DNMT1P26358 1616 aaKnown RBP11.89□□□□□ -0.51
ATP2C1-215ENST00000508660 STRCP1A6NGW2 1772 aa11.88□□□□□ -0.51
ATP2C1-215ENST00000508660 LRRC7Q96NW7 1537 aa11.88□□□□□ -0.51
ATP2C1-215ENST00000508660 MYO5CQ9NQX4 1742 aa11.88□□□□□ -0.51
ATP2C1-215ENST00000508660 CDK13Q14004 1512 aaKnown RBP11.87□□□□□ -0.51
ATP2C1-215ENST00000508660 POLR1AO95602 1720 aaPredicted RBP11.87□□□□□ -0.51
ATP2C1-215ENST00000508660 PCDHB8Q9UN66 801 aa11.87□□□□□ -0.51
ATP2C1-215ENST00000508660 SPOCK2Q92563 424 aa11.86□□□□□ -0.51
ATP2C1-215ENST00000508660 TRIM35Q9UPQ4 493 aa11.86□□□□□ -0.51
ATP2C1-215ENST00000508660 A2ML1A8K2U0 1454 aa11.86□□□□□ -0.51
ATP2C1-215ENST00000508660 CLTCQ00610 1675 aaKnown RBP11.86□□□□□ -0.51
ATP2C1-215ENST00000508660 KIDINS220Q9ULH0 1771 aa11.86□□□□□ -0.51
ATP2C1-215ENST00000508660 GSE1Q14687 1217 aa11.85□□□□□ -0.51
ATP2C1-215ENST00000508660 COLQQ9Y215 455 aaPredicted RBP11.85□□□□□ -0.51
ATP2C1-215ENST00000508660 TMEM106CQ9BVX2 250 aa11.84□□□□□ -0.51
ATP2C1-215ENST00000508660 RNF17Q9BXT8 1623 aaKnown RBP11.83□□□□□ -0.52
ATP2C1-215ENST00000508660 ARHGAP5Q13017 1502 aa11.83□□□□□ -0.52
ATP2C1-215ENST00000508660 RANGAP1P46060 587 aaPredicted RBP11.82□□□□□ -0.52
ATP2C1-215ENST00000508660 KIF14Q15058 1648 aa11.82□□□□□ -0.52
ATP2C1-215ENST00000508660 CHRM1P11229 460 aaPredicted RBP11.81□□□□□ -0.52
ATP2C1-215ENST00000508660 ANKLE2Q86XL3 938 aa11.81□□□□□ -0.52
ATP2C1-215ENST00000508660 TRIM52Q96A61 297 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms