RNA–Protein interactions for RNA: ENST00000508660.5

ATP2C1-215, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 5

Gene ATP2C1, Length 943 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-215ENST00000508660 AEBP2Q6ZN18 517 aaPredicted RBP24.87■■□□□ 1.57
ATP2C1-215ENST00000508660 CHIC1Q5VXU3 224 aa23.7■■□□□ 1.38
ATP2C1-215ENST00000508660 SENP3Q9H4L4 574 aaPredicted RBP21.04■□□□□ 0.96
ATP2C1-215ENST00000508660 PHF23Q9BUL5 403 aaPredicted RBP20.87■□□□□ 0.93
ATP2C1-215ENST00000508660 FOXD1Q16676 465 aa19.68■□□□□ 0.74
ATP2C1-215ENST00000508660 PLPPR3Q6T4P5 718 aa18.95■□□□□ 0.62
ATP2C1-215ENST00000508660 PPP6R1Q9UPN7 881 aa18.6■□□□□ 0.57
ATP2C1-215ENST00000508660 ADRA2BP18089 450 aa18.51■□□□□ 0.55
ATP2C1-215ENST00000508660 PIAS4Q8N2W9 510 aaPredicted RBP18.36■□□□□ 0.53
ATP2C1-215ENST00000508660 MSH5O43196 834 aa18.23■□□□□ 0.51
ATP2C1-215ENST00000508660 NISCHQ9Y2I1 1504 aa18.14■□□□□ 0.49
ATP2C1-215ENST00000508660 POTEDQ86YR6 584 aa17.6■□□□□ 0.41
ATP2C1-215ENST00000508660 ABCC9O60706 1549 aa17.47■□□□□ 0.39
ATP2C1-215ENST00000508660 DNAJC5BQ9UF47 199 aa17.27■□□□□ 0.36
ATP2C1-215ENST00000508660 MAPK8IP2Q13387 824 aaPredicted RBP16.96■□□□□ 0.31
ATP2C1-215ENST00000508660 SCAF1Q9H7N4 1312 aaKnown RBP16.76■□□□□ 0.27
ATP2C1-215ENST00000508660 DMRT2Q9Y5R5 561 aa16.75■□□□□ 0.27
ATP2C1-215ENST00000508660 PPP4R3CPQ6ZMV5 832 aa16.68■□□□□ 0.26
ATP2C1-215ENST00000508660 CCDC180Q9P1Z9 1646 aa16.56■□□□□ 0.24
ATP2C1-215ENST00000508660 DNAJC5Q9H3Z4 198 aa16.37■□□□□ 0.21
ATP2C1-215ENST00000508660 CNKSR2Q8WXI2 1034 aa16.29■□□□□ 0.2
ATP2C1-215ENST00000508660 HOXD11P31277 338 aaPredicted RBP16.22■□□□□ 0.19
ATP2C1-215ENST00000508660 PABPN1Q86U42 306 aaKnown RBP eCLIP16.19■□□□□ 0.18
ATP2C1-215ENST00000508660 RB1CC1Q8TDY2 1594 aa16.17■□□□□ 0.18
ATP2C1-215ENST00000508660 RNF216Q9NWF9 866 aaPredicted RBP16.11■□□□□ 0.17
ATP2C1-215ENST00000508660 DCAF8L1A6NGE4 600 aa15.99■□□□□ 0.15
ATP2C1-215ENST00000508660 NCBP3Q53F19 620 aaKnown RBP15.99■□□□□ 0.15
ATP2C1-215ENST00000508660 NPM3O75607 178 aaKnown RBP15.89■□□□□ 0.13
ATP2C1-215ENST00000508660 UNC13AQ9UPW8 1703 aa15.88■□□□□ 0.13
ATP2C1-215ENST00000508660 NACADO15069 1562 aa15.87■□□□□ 0.13
ATP2C1-215ENST00000508660 BICRAQ9NZM4 1560 aa15.84■□□□□ 0.13
ATP2C1-215ENST00000508660 CECR2Q9BXF3 1484 aa15.8■□□□□ 0.12
ATP2C1-215ENST00000508660 KCNA4P22459 653 aa15.76■□□□□ 0.11
ATP2C1-215ENST00000508660 CC2D2AQ9P2K1 1620 aa15.72■□□□□ 0.11
ATP2C1-215ENST00000508660 DCAF8L2P0C7V8 631 aa15.7■□□□□ 0.1
ATP2C1-215ENST00000508660 RNF39Q9H2S5 420 aa15.65■□□□□ 0.1
ATP2C1-215ENST00000508660 CACNB1Q02641 598 aaPredicted RBP15.55■□□□□ 0.08
ATP2C1-215ENST00000508660 EIF4G1Q04637 1599 aaKnown RBP15.47■□□□□ 0.07
ATP2C1-215ENST00000508660 SHROOM4Q9ULL8 1493 aa15.4■□□□□ 0.06
ATP2C1-215ENST00000508660 MYO15BQ96JP2 1530 aa15.38■□□□□ 0.05
ATP2C1-215ENST00000508660 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.38■□□□□ 0.05
ATP2C1-215ENST00000508660 C1QBPQ07021 282 aaKnown RBP15.37■□□□□ 0.05
ATP2C1-215ENST00000508660 CUX2O14529 1486 aa15.33■□□□□ 0.04
ATP2C1-215ENST00000508660 TRIM41Q8WV44 630 aa15.28■□□□□ 0.04
ATP2C1-215ENST00000508660 SLC4A2P04920 1241 aa15.17■□□□□ 0.02
ATP2C1-215ENST00000508660 U3KPZ7 1027 aaPredicted RBP15.16■□□□□ 0.02
ATP2C1-215ENST00000508660 SCRIBQ14160 1630 aa15.1■□□□□ 0.01
ATP2C1-215ENST00000508660 ERCC6Q03468 1493 aa15.07■□□□□ 0
ATP2C1-215ENST00000508660 SPINK5Q9NQ38 1064 aaPredicted RBP14.91□□□□□ -0.02
ATP2C1-215ENST00000508660 DCAF1Q9Y4B6 1507 aa14.89□□□□□ -0.03
ATP2C1-215ENST00000508660 SLC4A1APQ9BWU0 796 aaKnown RBP14.84□□□□□ -0.03
ATP2C1-215ENST00000508660 ZCCHC6Q5VYS8 1495 aaKnown RBP14.83□□□□□ -0.03
ATP2C1-215ENST00000508660 NESP48681 1621 aa14.81□□□□□ -0.04
ATP2C1-215ENST00000508660 CAPN15O75808 1086 aa14.78□□□□□ -0.04
ATP2C1-215ENST00000508660 THOC2Q8NI27 1593 aaKnown RBP14.76□□□□□ -0.05
ATP2C1-215ENST00000508660 DSG3P32926 999 aa14.73□□□□□ -0.05
ATP2C1-215ENST00000508660 NCAPD3P42695 1498 aa14.72□□□□□ -0.05
ATP2C1-215ENST00000508660 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.64□□□□□ -0.07
ATP2C1-215ENST00000508660 HNRNPUL2Q1KMD3 747 aaKnown RBP14.64□□□□□ -0.07
ATP2C1-215ENST00000508660 MYCNP04198 464 aaPredicted RBP14.62□□□□□ -0.07
ATP2C1-215ENST00000508660 SAMD1Q6SPF0 538 aaPredicted RBP14.61□□□□□ -0.07
ATP2C1-215ENST00000508660 TRHP20396 242 aaPredicted RBP14.6□□□□□ -0.07
ATP2C1-215ENST00000508660 FOXD4L1Q9NU39 408 aa14.58□□□□□ -0.08
ATP2C1-215ENST00000508660 SMARCA2P51531 1590 aa14.58□□□□□ -0.08
ATP2C1-215ENST00000508660 ATAD2BQ9ULI0 1458 aa14.57□□□□□ -0.08
ATP2C1-215ENST00000508660 ZBTB22O15209 634 aa14.56□□□□□ -0.08
ATP2C1-215ENST00000508660 APLP2Q06481 763 aa14.56□□□□□ -0.08
ATP2C1-215ENST00000508660 OSCARQ8IYS5 282 aa14.54□□□□□ -0.08
ATP2C1-215ENST00000508660 ZNF219Q9P2Y4 722 aaPredicted RBP14.54□□□□□ -0.08
ATP2C1-215ENST00000508660 KIF21AQ7Z4S6 1674 aa14.52□□□□□ -0.08
ATP2C1-215ENST00000508660 ABCB7O75027 752 aa14.51□□□□□ -0.09
ATP2C1-215ENST00000508660 BAZ1AQ9NRL2 1556 aaPredicted RBP14.51□□□□□ -0.09
ATP2C1-215ENST00000508660 HMGXB3Q12766 1538 aa14.47□□□□□ -0.09
ATP2C1-215ENST00000508660 LAMC3Q9Y6N6 1575 aa14.46□□□□□ -0.09
ATP2C1-215ENST00000508660 RIMBP3CA6NJZ7 1639 aa14.44□□□□□ -0.1
ATP2C1-215ENST00000508660 RIMBP3BA6NNM3 1639 aa14.44□□□□□ -0.1
ATP2C1-215ENST00000508660 RIMBP3Q9UFD9 1639 aa14.44□□□□□ -0.1
ATP2C1-215ENST00000508660 PDS5BQ9NTI5 1447 aa14.41□□□□□ -0.1
ATP2C1-215ENST00000508660 ATF5Q9Y2D1 282 aaPredicted RBP14.4□□□□□ -0.1
ATP2C1-215ENST00000508660 MRC2Q9UBG0 1479 aa14.36□□□□□ -0.11
ATP2C1-215ENST00000508660 WDR62O43379 1518 aa14.36□□□□□ -0.11
ATP2C1-215ENST00000508660 BAZ1BQ9UIG0 1483 aaKnown RBP14.33□□□□□ -0.12
ATP2C1-215ENST00000508660 SMARCA4P51532 1647 aa14.31□□□□□ -0.12
ATP2C1-215ENST00000508660 ARHGEF11O15085 1522 aa14.3□□□□□ -0.12
ATP2C1-215ENST00000508660 CYB5RLQ6IPT4 315 aa14.29□□□□□ -0.12
ATP2C1-215ENST00000508660 POLA2Q14181 598 aa14.27□□□□□ -0.13
ATP2C1-215ENST00000508660 CADPSQ9ULU8 1353 aa14.23□□□□□ -0.13
ATP2C1-215ENST00000508660 PEG3Q9GZU2 1588 aa14.17□□□□□ -0.14
ATP2C1-215ENST00000508660 ILDR1Q86SU0 546 aaPredicted RBP14.14□□□□□ -0.15
ATP2C1-215ENST00000508660 ARAP1Q96P48 1450 aa14.12□□□□□ -0.15
ATP2C1-215ENST00000508660 CEP164Q9UPV0 1460 aa14.12□□□□□ -0.15
ATP2C1-215ENST00000508660 ATXN8OSP0DMR3 200 aa14.09□□□□□ -0.15
ATP2C1-215ENST00000508660 FANCD2Q9BXW9 1451 aa14.06□□□□□ -0.16
ATP2C1-215ENST00000508660 URB2Q14146 1524 aaKnown RBP14.03□□□□□ -0.16
ATP2C1-215ENST00000508660 ZNF608Q9ULD9 1512 aaPredicted RBP14.02□□□□□ -0.16
ATP2C1-215ENST00000508660 MROH2BQ7Z745 1585 aa14□□□□□ -0.17
ATP2C1-215ENST00000508660 CSRNP3Q8WYN3 585 aa14□□□□□ -0.17
ATP2C1-215ENST00000508660 RBM42Q9BTD8 480 aaKnown RBP13.93□□□□□ -0.18
ATP2C1-215ENST00000508660 RSF1Q96T23 1441 aaPredicted RBP13.91□□□□□ -0.18
ATP2C1-215ENST00000508660 CFTRP13569 1480 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms