RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 TIAM1Q13009 1591 aa15.13■□□□□ 0.01
UBE2D3-223ENST00000508249 PZPP20742 1482 aa15.13■□□□□ 0.01
UBE2D3-223ENST00000508249 HNRNPMP52272 730 aaKnown RBP eCLIP15.12■□□□□ 0.014e-13■■■■■ 32.7
UBE2D3-223ENST00000508249 PLEKHH2Q8IVE3 1493 aa15.12■□□□□ 0.01
UBE2D3-223ENST00000508249 MBD5Q9P267 1494 aa15.12■□□□□ 0.01
UBE2D3-223ENST00000508249 KDM5DQ9BY66 1539 aa15.12■□□□□ 0.01
UBE2D3-223ENST00000508249 FAM135AQ9P2D6 1515 aa15.12■□□□□ 0.01
UBE2D3-223ENST00000508249 EHMT2Q96KQ7 1210 aa15.11■□□□□ 0.01
UBE2D3-223ENST00000508249 SCAF1Q9H7N4 1312 aaKnown RBP15.1■□□□□ 0.01
UBE2D3-223ENST00000508249 LRRC7Q96NW7 1537 aa15.09■□□□□ 0.01
UBE2D3-223ENST00000508249 UBTFP17480 764 aaKnown RBP15.09■□□□□ 0.01
UBE2D3-223ENST00000508249 TOM1O60784 492 aa15.08■□□□□ 0
UBE2D3-223ENST00000508249 GGT6Q6P531 493 aa15.08■□□□□ 0
UBE2D3-223ENST00000508249 ZNF777Q9ULD5 760 aaPredicted RBP15.08■□□□□ 0
UBE2D3-223ENST00000508249 TNRQ92752 1358 aa15.08■□□□□ 0
UBE2D3-223ENST00000508249 RGS17Q9UGC6 210 aaPredicted RBP15.07■□□□□ 0
UBE2D3-223ENST00000508249 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.07■□□□□ 01e-10■■■□□ 14.9
UBE2D3-223ENST00000508249 NPHP4O75161 1426 aaPredicted RBP15.07■□□□□ 0
UBE2D3-223ENST00000508249 UGGT1Q9NYU2 1555 aa15.07■□□□□ 0
UBE2D3-223ENST00000508249 FBXO31Q5XUX0 539 aaPredicted RBP15.06■□□□□ 0
UBE2D3-223ENST00000508249 RTEL1-TNFRSF6BF6WH68 1400 aa15.05■□□□□ -0
UBE2D3-223ENST00000508249 NLRP1Q9C000 1473 aa15.05■□□□□ -0
UBE2D3-223ENST00000508249 SETD1AO15047 1707 aaKnown RBP15.03■□□□□ -0
UBE2D3-223ENST00000508249 UBR1Q8IWV7 1749 aa15.03■□□□□ -0
UBE2D3-223ENST00000508249 DHX29Q7Z478 1369 aaKnown RBP15.02■□□□□ -0
UBE2D3-223ENST00000508249 ZNF644Q9H582 1327 aaPredicted RBP15.02■□□□□ -0
UBE2D3-223ENST00000508249 PHF23Q9BUL5 403 aaPredicted RBP15.02■□□□□ -0
UBE2D3-223ENST00000508249 MROH1Q8NDA8 1641 aa15.02□□□□□ -0.01
UBE2D3-223ENST00000508249 MIA2Q96PC5 1412 aa15□□□□□ -0.01
UBE2D3-223ENST00000508249 CCNB3Q8WWL7 1395 aa14.99□□□□□ -0.01
UBE2D3-223ENST00000508249 CFDP1Q9UEE9 299 aaPredicted RBP14.99□□□□□ -0.01
UBE2D3-223ENST00000508249 ABCC3O15438 1527 aa14.98□□□□□ -0.01
UBE2D3-223ENST00000508249 EHBP1L1Q8N3D4 1523 aa14.98□□□□□ -0.01
UBE2D3-223ENST00000508249 CCDC141Q6ZP82 1450 aa14.97□□□□□ -0.01
UBE2D3-223ENST00000508249 CEP152O94986 1710 aa14.97□□□□□ -0.01
UBE2D3-223ENST00000508249 ANKLE2Q86XL3 938 aa14.96□□□□□ -0.01
UBE2D3-223ENST00000508249 ERVK-7P63135 1459 aa14.95□□□□□ -0.02
UBE2D3-223ENST00000508249 NCOA2Q15596 1464 aa14.95□□□□□ -0.02
UBE2D3-223ENST00000508249 CAMSAP2Q08AD1 1489 aa14.95□□□□□ -0.02
UBE2D3-223ENST00000508249 ARHGAP23Q9P227 1491 aa14.94□□□□□ -0.02
UBE2D3-223ENST00000508249 ARHGEF5Q12774 1597 aa14.94□□□□□ -0.02
UBE2D3-223ENST00000508249 CEP162Q5TB80 1403 aa14.93□□□□□ -0.02
UBE2D3-223ENST00000508249 SLIT1O75093 1534 aa14.93□□□□□ -0.02
UBE2D3-223ENST00000508249 EIF2AK4Q9P2K8 1649 aaKnown RBP14.93□□□□□ -0.02
UBE2D3-223ENST00000508249 SENP3Q9H4L4 574 aaPredicted RBP14.93□□□□□ -0.02
UBE2D3-223ENST00000508249 ROBO1Q9Y6N7 1651 aa14.93□□□□□ -0.02
UBE2D3-223ENST00000508249 MAP3K1Q13233 1512 aa14.92□□□□□ -0.02
UBE2D3-223ENST00000508249 KIF3BO15066 747 aa14.92□□□□□ -0.02
UBE2D3-223ENST00000508249 POTEAQ6S8J7 498 aa14.92□□□□□ -0.02
UBE2D3-223ENST00000508249 THEMISQ8N1K5 641 aaPredicted RBP14.92□□□□□ -0.02
UBE2D3-223ENST00000508249 SCAF11Q99590 1463 aaKnown RBP14.91□□□□□ -0.02
UBE2D3-223ENST00000508249 MTUS2Q5JR59 1369 aa14.91□□□□□ -0.02
UBE2D3-223ENST00000508249 MAST1Q9Y2H9 1570 aa14.9□□□□□ -0.02
UBE2D3-223ENST00000508249 CFAP65Q6ZU64 1925 aaKnown RBP14.9□□□□□ -0.02
UBE2D3-223ENST00000508249 FAM135BQ49AJ0 1406 aa14.88□□□□□ -0.03
UBE2D3-223ENST00000508249 WASHC2CQ9Y4E1 1318 aa14.88□□□□□ -0.03
UBE2D3-223ENST00000508249 PIK3C2BO00750 1634 aa14.87□□□□□ -0.03
UBE2D3-223ENST00000508249 NWD1Q149M9 1564 aa14.85□□□□□ -0.03
UBE2D3-223ENST00000508249 SRCAPQ6ZRS2 3230 aa14.85□□□□□ -0.03
UBE2D3-223ENST00000508249 KDM5AP29375 1690 aaKnown RBP14.84□□□□□ -0.03
UBE2D3-223ENST00000508249 PRDM15P57071 1507 aaPredicted RBP14.84□□□□□ -0.03
UBE2D3-223ENST00000508249 LTKP29376 864 aa14.84□□□□□ -0.03
UBE2D3-223ENST00000508249 TET3O43151 1660 aa14.83□□□□□ -0.04
UBE2D3-223ENST00000508249 COL16A1Q07092 1604 aaPredicted RBP14.82□□□□□ -0.04
UBE2D3-223ENST00000508249 PHLPP1O60346 1717 aa14.82□□□□□ -0.04
UBE2D3-223ENST00000508249 LRP6O75581 1613 aa14.79□□□□□ -0.04
UBE2D3-223ENST00000508249 CROCC2H7BZ55 1655 aa14.78□□□□□ -0.04
UBE2D3-223ENST00000508249 ARHGAP31Q2M1Z3 1444 aa14.78□□□□□ -0.04
UBE2D3-223ENST00000508249 TMEM94Q12767 1356 aa14.78□□□□□ -0.04
UBE2D3-223ENST00000508249 LRRC9Q6ZRR7 1453 aa14.77□□□□□ -0.04
UBE2D3-223ENST00000508249 NKTRP30414 1462 aaKnown RBP14.76□□□□□ -0.05
UBE2D3-223ENST00000508249 TMEM2Q9UHN6 1383 aa14.74□□□□□ -0.05
UBE2D3-223ENST00000508249 EFCAB6Q5THR3 1501 aa14.74□□□□□ -0.05
UBE2D3-223ENST00000508249 DUOX2Q9NRD8 1548 aa14.74□□□□□ -0.05
UBE2D3-223ENST00000508249 SHPRHQ149N8 1683 aa14.74□□□□□ -0.05
UBE2D3-223ENST00000508249 CHD2O14647 1828 aaKnown RBP14.73□□□□□ -0.05
UBE2D3-223ENST00000508249 RSPH4AQ5TD94 716 aa14.73□□□□□ -0.05
UBE2D3-223ENST00000508249 MYO5BQ9ULV0 1848 aa14.72□□□□□ -0.05
UBE2D3-223ENST00000508249 TXNDC2Q86VQ3 553 aa14.72□□□□□ -0.05
UBE2D3-223ENST00000508249 ADGRB3O60242 1522 aa14.71□□□□□ -0.05
UBE2D3-223ENST00000508249 DIP2AQ14689 1571 aa14.7□□□□□ -0.06
UBE2D3-223ENST00000508249 RBM33Q96EV2 1170 aaKnown RBP14.7□□□□□ -0.06
UBE2D3-223ENST00000508249 LMTK2Q8IWU2 1503 aa14.7□□□□□ -0.06
UBE2D3-223ENST00000508249 AHDC1Q5TGY3 1603 aaPredicted RBP14.7□□□□□ -0.06
UBE2D3-223ENST00000508249 UPF1Q92900 1129 aaKnown RBP eCLIP14.69□□□□□ -0.06
UBE2D3-223ENST00000508249 JCADQ9P266 1359 aa14.69□□□□□ -0.06
UBE2D3-223ENST00000508249 KCNA6P17658 529 aa14.67□□□□□ -0.06
UBE2D3-223ENST00000508249 ERBINQ96RT1 1412 aa14.66□□□□□ -0.06
UBE2D3-223ENST00000508249 NOS1P29475 1434 aa14.66□□□□□ -0.06
UBE2D3-223ENST00000508249 TSPY4P0CV99 314 aa14.65□□□□□ -0.06
UBE2D3-223ENST00000508249 TSPY10P0CW01 314 aa14.65□□□□□ -0.06
UBE2D3-223ENST00000508249 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.65□□□□□ -0.06
UBE2D3-223ENST00000508249 ZFYVE9O95405 1425 aa14.65□□□□□ -0.06
UBE2D3-223ENST00000508249 FGD6Q6ZV73 1430 aa14.65□□□□□ -0.06
UBE2D3-223ENST00000508249 GCC2Q8IWJ2 1684 aa14.65□□□□□ -0.06
UBE2D3-223ENST00000508249 KIF15Q9NS87 1388 aa14.63□□□□□ -0.07
UBE2D3-223ENST00000508249 SLC26A8Q96RN1 970 aa14.63□□□□□ -0.07
UBE2D3-223ENST00000508249 CDK12Q9NYV4 1490 aaPredicted RBP14.63□□□□□ -0.07
UBE2D3-223ENST00000508249 MYOM3Q5VTT5 1437 aa14.62□□□□□ -0.07
UBE2D3-223ENST00000508249 EID1Q9Y6B2 187 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 1107.5 ms