RNA–Protein interactions for RNA: ENST00000508190.1

HOXC9-203, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 3 BASIC

Gene HOXC9, Length 1,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-203ENST00000508190 KIF3BO15066 747 aa31.09■■■□□ 2.57
HOXC9-203ENST00000508190 PRDM15P57071 1507 aaPredicted RBP31.03■■■□□ 2.56
HOXC9-203ENST00000508190 ARID4BQ4LE39 1312 aaPredicted RBP31.02■■■□□ 2.56
HOXC9-203ENST00000508190 CEP152O94986 1710 aa31■■■□□ 2.55
HOXC9-203ENST00000508190 GGT6Q6P531 493 aa30.98■■■□□ 2.55
HOXC9-203ENST00000508190 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.98■■■□□ 2.55
HOXC9-203ENST00000508190 IQGAP3Q86VI3 1631 aa30.98■■■□□ 2.55
HOXC9-203ENST00000508190 MLECQ14165 292 aa30.97■■■□□ 2.55
HOXC9-203ENST00000508190 HRCP23327 699 aa30.96■■■□□ 2.55
HOXC9-203ENST00000508190 TRIM52Q96A61 297 aa30.96■■■□□ 2.55
HOXC9-203ENST00000508190 KDM5DQ9BY66 1539 aa30.96■■■□□ 2.55
HOXC9-203ENST00000508190 VWDEQ8N2E2 1590 aa30.96■■■□□ 2.55
HOXC9-203ENST00000508190 NUP155O75694 1391 aa30.93■■■□□ 2.54
HOXC9-203ENST00000508190 FAM135AQ9P2D6 1515 aa30.92■■■□□ 2.54
HOXC9-203ENST00000508190 FER1L4A9Z1Z3 1794 aa30.92■■■□□ 2.54
HOXC9-203ENST00000508190 CLTCQ00610 1675 aaKnown RBP30.91■■■□□ 2.54
HOXC9-203ENST00000508190 ZC3H13Q5T200 1668 aaKnown RBP30.91■■■□□ 2.54
HOXC9-203ENST00000508190 PZPP20742 1482 aa30.9■■■□□ 2.54
HOXC9-203ENST00000508190 ABCC3O15438 1527 aa30.88■■■□□ 2.53
HOXC9-203ENST00000508190 KANK1Q14678 1352 aa30.88■■■□□ 2.53
HOXC9-203ENST00000508190 TET3O43151 1660 aa30.87■■■□□ 2.53
HOXC9-203ENST00000508190 CAMSAP1Q5T5Y3 1602 aa30.86■■■□□ 2.53
HOXC9-203ENST00000508190 ADAMTSL3P82987 1691 aa30.85■■■□□ 2.53
HOXC9-203ENST00000508190 MADDQ8WXG6 1647 aa30.84■■■□□ 2.53
HOXC9-203ENST00000508190 ACIN1Q9UKV3 1341 aaKnown RBP30.84■■■□□ 2.53
HOXC9-203ENST00000508190 LMTK2Q8IWU2 1503 aa30.83■■■□□ 2.53
HOXC9-203ENST00000508190 CFAP65Q6ZU64 1925 aaKnown RBP30.82■■■□□ 2.52
HOXC9-203ENST00000508190 E9PCH4 1651 aa30.81■■■□□ 2.52
HOXC9-203ENST00000508190 WASHC2CQ9Y4E1 1318 aa30.81■■■□□ 2.52
HOXC9-203ENST00000508190 RIMS1Q86UR5 1692 aaKnown RBP30.8■■■□□ 2.52
HOXC9-203ENST00000508190 EFCAB6Q5THR3 1501 aa30.79■■■□□ 2.52
HOXC9-203ENST00000508190 MPHOSPH9Q99550 1183 aa30.78■■■□□ 2.52
HOXC9-203ENST00000508190 SLC4A1APQ9BWU0 796 aaKnown RBP30.78■■■□□ 2.52
HOXC9-203ENST00000508190 MROH2AA6NES4 1674 aa30.78■■■□□ 2.52
HOXC9-203ENST00000508190 PPP6R1Q9UPN7 881 aa30.78■■■□□ 2.52
HOXC9-203ENST00000508190 DHX57Q6P158 1386 aaKnown RBP30.76■■■□□ 2.52
HOXC9-203ENST00000508190 ESF1Q9H501 851 aaKnown RBP30.72■■■□□ 2.51
HOXC9-203ENST00000508190 C3P01024 1663 aa30.71■■■□□ 2.51
HOXC9-203ENST00000508190 CNTLNQ9NXG0 1405 aa30.71■■■□□ 2.51
HOXC9-203ENST00000508190 PKD2Q13563 968 aa30.7■■■□□ 2.51
HOXC9-203ENST00000508190 FOXD1Q16676 465 aa30.69■■■□□ 2.5
HOXC9-203ENST00000508190 NPATQ14207 1427 aa30.69■■■□□ 2.5
HOXC9-203ENST00000508190 SPHKAPQ2M3C7 1700 aa30.67■■■□□ 2.5
HOXC9-203ENST00000508190 PREX1Q8TCU6 1659 aa30.66■■■□□ 2.5
HOXC9-203ENST00000508190 ARHGAP31Q2M1Z3 1444 aa30.65■■■□□ 2.5
HOXC9-203ENST00000508190 ZMYM3Q14202 1370 aa30.65■■■□□ 2.5
HOXC9-203ENST00000508190 RPRD2Q5VT52 1461 aaKnown RBP30.63■■■□□ 2.49
HOXC9-203ENST00000508190 CEBPAP49715 358 aaPredicted RBP30.57■■■□□ 2.48
HOXC9-203ENST00000508190 KDM4FA0A1W2PPD8 638 aa30.56■■■□□ 2.48
HOXC9-203ENST00000508190 PLPPR3Q6T4P5 718 aa30.56■■■□□ 2.48
HOXC9-203ENST00000508190 CCER1Q8TC90 406 aaPredicted RBP30.56■■■□□ 2.48
HOXC9-203ENST00000508190 ERVK-7P63135 1459 aa30.56■■■□□ 2.48
HOXC9-203ENST00000508190 SYNMO15061 1565 aa30.55■■■□□ 2.48
HOXC9-203ENST00000508190 FBXO31Q5XUX0 539 aaPredicted RBP30.55■■■□□ 2.48
HOXC9-203ENST00000508190 PLA2R1Q13018 1463 aa30.55■■■□□ 2.48
HOXC9-203ENST00000508190 SPATA31D1Q6ZQQ2 1576 aa30.54■■■□□ 2.48
HOXC9-203ENST00000508190 PTPRMP28827 1452 aa30.54■■■□□ 2.48
HOXC9-203ENST00000508190 TRPM2O94759 1503 aa30.53■■■□□ 2.48
HOXC9-203ENST00000508190 PTPRTO14522 1441 aa30.53■■■□□ 2.48
HOXC9-203ENST00000508190 ANKRD30BQ9BXX2 1392 aa30.52■■■□□ 2.48
HOXC9-203ENST00000508190 NOS1P29475 1434 aa30.52■■■□□ 2.48
HOXC9-203ENST00000508190 UGGT1Q9NYU2 1555 aa30.5■■■□□ 2.47
HOXC9-203ENST00000508190 CLTCL1P53675 1640 aa30.5■■■□□ 2.47
HOXC9-203ENST00000508190 PIK3C2BO00750 1634 aa30.47■■■□□ 2.47
HOXC9-203ENST00000508190 KIF1BO60333 1816 aa30.43■■■□□ 2.46
HOXC9-203ENST00000508190 TNRQ92752 1358 aa30.41■■■□□ 2.46
HOXC9-203ENST00000508190 CCDC144AA2RUR9 1427 aa30.41■■■□□ 2.46
HOXC9-203ENST00000508190 MYO5BQ9ULV0 1848 aa30.41■■■□□ 2.46
HOXC9-203ENST00000508190 MYO3AQ8NEV4 1616 aa30.41■■■□□ 2.46
HOXC9-203ENST00000508190 SIN3AQ96ST3 1273 aa30.4■■■□□ 2.46
HOXC9-203ENST00000508190 SETD1BQ9UPS6 1966 aaKnown RBP30.4■■■□□ 2.46
HOXC9-203ENST00000508190 CLSPNQ9HAW4 1339 aa30.37■■■□□ 2.45
HOXC9-203ENST00000508190 NEUROD1Q13562 356 aa30.32■■■□□ 2.44
HOXC9-203ENST00000508190 IDI1Q13907 227 aa30.32■■■□□ 2.44
HOXC9-203ENST00000508190 TMEM131LA2VDJ0 1609 aa30.3■■■□□ 2.44
HOXC9-203ENST00000508190 ZNF142P52746 1687 aaPredicted RBP30.3■■■□□ 2.44
HOXC9-203ENST00000508190 SLC52A1Q9NWF4 448 aa30.3■■■□□ 2.44
HOXC9-203ENST00000508190 UBR1Q8IWV7 1749 aa30.3■■■□□ 2.44
HOXC9-203ENST00000508190 NLRP1Q9C000 1473 aa30.3■■■□□ 2.44
HOXC9-203ENST00000508190 ADGRB3O60242 1522 aa30.28■■■□□ 2.44
HOXC9-203ENST00000508190 KDM5AP29375 1690 aaKnown RBP30.26■■■□□ 2.43
HOXC9-203ENST00000508190 CEP170BQ9Y4F5 1589 aaPredicted RBP30.26■■■□□ 2.43
HOXC9-203ENST00000508190 SPATA31E1Q6ZUB1 1445 aa30.24■■■□□ 2.43
HOXC9-203ENST00000508190 CHGAP10645 457 aaKnown RBP30.24■■■□□ 2.43
HOXC9-203ENST00000508190 A2ML1A8K2U0 1454 aa30.22■■■□□ 2.43
HOXC9-203ENST00000508190 NEURL4Q96JN8 1562 aa30.21■■■□□ 2.43
HOXC9-203ENST00000508190 IFT172Q9UG01 1749 aa30.19■■■□□ 2.42
HOXC9-203ENST00000508190 UHRF1BP1Q6BDS2 1440 aa30.19■■■□□ 2.42
HOXC9-203ENST00000508190 PPLO60437 1756 aa30.18■■■□□ 2.42
HOXC9-203ENST00000508190 RGL3Q3MIN7 710 aa30.17■■■□□ 2.42
HOXC9-203ENST00000508190 STAG3Q9UJ98 1225 aa30.17■■■□□ 2.42
HOXC9-203ENST00000508190 TONSLQ96HA7 1378 aa30.13■■■□□ 2.41
HOXC9-203ENST00000508190 ZNF326Q5BKZ1 582 aaKnown RBP30.12■■■□□ 2.41
HOXC9-203ENST00000508190 NEXMIFQ5QGS0 1516 aa30.11■■■□□ 2.41
HOXC9-203ENST00000508190 L3MBTL2Q969R5 705 aa30.09■■■□□ 2.41
HOXC9-203ENST00000508190 LMTK3Q96Q04 1460 aa30.07■■■□□ 2.4
HOXC9-203ENST00000508190 SLIT1O75093 1534 aa30.04■■■□□ 2.4
HOXC9-203ENST00000508190 RIMS2Q9UQ26 1411 aa30.04■■■□□ 2.4
HOXC9-203ENST00000508190 ZFYVE9O95405 1425 aa30.03■■■□□ 2.4
HOXC9-203ENST00000508190 TMEM2Q9UHN6 1383 aa30.03■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms