RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 IQSEC2Q5JU85 1478 aa15.06■□□□□ 0
PTPN20-216ENST00000506080 SYCP2Q9BX26 1530 aa15.06■□□□□ 0
PTPN20-216ENST00000506080 ZBTB12Q9Y330 459 aaPredicted RBP15.06■□□□□ 0
PTPN20-216ENST00000506080 NPATQ14207 1427 aa15.05■□□□□ -0
PTPN20-216ENST00000506080 ZNF335Q9H4Z2 1342 aaPredicted RBP15.05■□□□□ -0
PTPN20-216ENST00000506080 SUPT6HQ7KZ85 1726 aaKnown RBP15.05■□□□□ -0
PTPN20-216ENST00000506080 MROH2AA6NES4 1674 aa15.04■□□□□ -0
PTPN20-216ENST00000506080 POTEHQ6S545 545 aa15.03■□□□□ -0
PTPN20-216ENST00000506080 UBAP1LF5GYI3 381 aa15.02■□□□□ -0
PTPN20-216ENST00000506080 GPATCH8Q9UKJ3 1502 aaKnown RBP15.02■□□□□ -0
PTPN20-216ENST00000506080 GGT6Q6P531 493 aa15.01□□□□□ -0.01
PTPN20-216ENST00000506080 CLTCQ00610 1675 aaKnown RBP15.01□□□□□ -0.01
PTPN20-216ENST00000506080 ATP7AQ04656 1500 aa15.01□□□□□ -0.01
PTPN20-216ENST00000506080 FYCO1Q9BQS8 1478 aa15□□□□□ -0.01
PTPN20-216ENST00000506080 CFDP1Q9UEE9 299 aaPredicted RBP15□□□□□ -0.01
PTPN20-216ENST00000506080 A2MP01023 1474 aa14.99□□□□□ -0.01
PTPN20-216ENST00000506080 MYO3AQ8NEV4 1616 aa14.99□□□□□ -0.01
PTPN20-216ENST00000506080 PKD2Q13563 968 aa14.99□□□□□ -0.01
PTPN20-216ENST00000506080 PTPRKQ15262 1439 aa14.99□□□□□ -0.01
PTPN20-216ENST00000506080 PLA2R1Q13018 1463 aa14.97□□□□□ -0.01
PTPN20-216ENST00000506080 PLXNC1O60486 1568 aa14.97□□□□□ -0.01
PTPN20-216ENST00000506080 INO80Q9ULG1 1556 aaPredicted RBP14.97□□□□□ -0.01
PTPN20-216ENST00000506080 CEP170BQ9Y4F5 1589 aaPredicted RBP14.97□□□□□ -0.01
PTPN20-216ENST00000506080 CCNB3Q8WWL7 1395 aa14.97□□□□□ -0.01
PTPN20-216ENST00000506080 ZNF142P52746 1687 aaPredicted RBP14.96□□□□□ -0.01
PTPN20-216ENST00000506080 KIAA1107Q9UPP5 1409 aa14.96□□□□□ -0.01
PTPN20-216ENST00000506080 TCOF1Q13428 1488 aaKnown RBP14.96□□□□□ -0.01
PTPN20-216ENST00000506080 PLEKHH2Q8IVE3 1493 aa14.96□□□□□ -0.01
PTPN20-216ENST00000506080 ZNF644Q9H582 1327 aaPredicted RBP14.93□□□□□ -0.02
PTPN20-216ENST00000506080 MTUS2Q5JR59 1369 aa14.93□□□□□ -0.02
PTPN20-216ENST00000506080 A2ML1A8K2U0 1454 aa14.9□□□□□ -0.02
PTPN20-216ENST00000506080 PIP4K2BP78356 416 aa14.9□□□□□ -0.02
PTPN20-216ENST00000506080 ADGBQ8N7X0 1667 aa14.9□□□□□ -0.02
PTPN20-216ENST00000506080 DNMT1P26358 1616 aaKnown RBP14.89□□□□□ -0.03
PTPN20-216ENST00000506080 FBXO31Q5XUX0 539 aaPredicted RBP14.88□□□□□ -0.03
PTPN20-216ENST00000506080 MBD5Q9P267 1494 aa14.87□□□□□ -0.03
PTPN20-216ENST00000506080 HSPA1LP34931 641 aa14.87□□□□□ -0.03
PTPN20-216ENST00000506080 TIAM1Q13009 1591 aa14.87□□□□□ -0.03
PTPN20-216ENST00000506080 DHX29Q7Z478 1369 aaKnown RBP14.87□□□□□ -0.03
PTPN20-216ENST00000506080 KIF3BO15066 747 aa14.86□□□□□ -0.03
PTPN20-216ENST00000506080 TNRQ92752 1358 aa14.86□□□□□ -0.03
PTPN20-216ENST00000506080 TOM1O60784 492 aa14.85□□□□□ -0.03
PTPN20-216ENST00000506080 RTEL1-TNFRSF6BF6WH68 1400 aa14.84□□□□□ -0.03
PTPN20-216ENST00000506080 NEURL4Q96JN8 1562 aa14.84□□□□□ -0.03
PTPN20-216ENST00000506080 AKT1S1Q96B36 256 aa14.83□□□□□ -0.03
PTPN20-216ENST00000506080 POLR1AO95602 1720 aaPredicted RBP14.83□□□□□ -0.04
PTPN20-216ENST00000506080 MED1Q15648 1581 aaPredicted RBP14.83□□□□□ -0.04
PTPN20-216ENST00000506080 CPS1P31327 1500 aa14.83□□□□□ -0.04
PTPN20-216ENST00000506080 EHBP1L1Q8N3D4 1523 aa14.83□□□□□ -0.04
PTPN20-216ENST00000506080 SHANK2Q9UPX8 1470 aa14.83□□□□□ -0.04
PTPN20-216ENST00000506080 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.83□□□□□ -0.04
PTPN20-216ENST00000506080 PZPP20742 1482 aa14.82□□□□□ -0.04
PTPN20-216ENST00000506080 WASHC2CQ9Y4E1 1318 aa14.82□□□□□ -0.04
PTPN20-216ENST00000506080 KDM5DQ9BY66 1539 aa14.81□□□□□ -0.04
PTPN20-216ENST00000506080 ANKLE2Q86XL3 938 aa14.81□□□□□ -0.04
PTPN20-216ENST00000506080 CEP162Q5TB80 1403 aa14.8□□□□□ -0.04
PTPN20-216ENST00000506080 CHRDL2Q6WN34 429 aa14.8□□□□□ -0.04
PTPN20-216ENST00000506080 THEMISQ8N1K5 641 aaPredicted RBP14.79□□□□□ -0.04
PTPN20-216ENST00000506080 CCDC141Q6ZP82 1450 aa14.79□□□□□ -0.04
PTPN20-216ENST00000506080 MIA2Q96PC5 1412 aa14.79□□□□□ -0.04
PTPN20-216ENST00000506080 MKRN4PQ13434 485 aaPredicted RBP14.78□□□□□ -0.04
PTPN20-216ENST00000506080 VWDEQ8N2E2 1590 aa14.78□□□□□ -0.04
PTPN20-216ENST00000506080 CAMSAP2Q08AD1 1489 aa14.77□□□□□ -0.04
PTPN20-216ENST00000506080 NPHP4O75161 1426 aaPredicted RBP14.77□□□□□ -0.04
PTPN20-216ENST00000506080 UGGT1Q9NYU2 1555 aa14.77□□□□□ -0.05
PTPN20-216ENST00000506080 NLRP1Q9C000 1473 aa14.76□□□□□ -0.05
PTPN20-216ENST00000506080 FAM135AQ9P2D6 1515 aa14.75□□□□□ -0.05
PTPN20-216ENST00000506080 NCOA2Q15596 1464 aa14.75□□□□□ -0.05
PTPN20-216ENST00000506080 RSPH4AQ5TD94 716 aa14.75□□□□□ -0.05
PTPN20-216ENST00000506080 REM2Q8IYK8 340 aaPredicted RBP14.75□□□□□ -0.05
PTPN20-216ENST00000506080 ALKQ9UM73 1620 aa14.74□□□□□ -0.05
PTPN20-216ENST00000506080 MED14O60244 1454 aa14.73□□□□□ -0.05
PTPN20-216ENST00000506080 DEPDC5O75140 1603 aa14.73□□□□□ -0.05
PTPN20-216ENST00000506080 TSPY4P0CV99 314 aa14.73□□□□□ -0.05
PTPN20-216ENST00000506080 TSPY10P0CW01 314 aa14.73□□□□□ -0.05
PTPN20-216ENST00000506080 IQGAP1P46940 1657 aa14.71□□□□□ -0.05
PTPN20-216ENST00000506080 STRCP1A6NGW2 1772 aa14.69□□□□□ -0.06
PTPN20-216ENST00000506080 LRRC7Q96NW7 1537 aa14.69□□□□□ -0.06
PTPN20-216ENST00000506080 ARHGEF5Q12774 1597 aa14.69□□□□□ -0.06
PTPN20-216ENST00000506080 ABCC3O15438 1527 aa14.68□□□□□ -0.06
PTPN20-216ENST00000506080 RNF17Q9BXT8 1623 aaKnown RBP14.67□□□□□ -0.06
PTPN20-216ENST00000506080 ERVK-7P63135 1459 aa14.66□□□□□ -0.06
PTPN20-216ENST00000506080 SYNMO15061 1565 aa14.65□□□□□ -0.06
PTPN20-216ENST00000506080 ZC3H13Q5T200 1668 aaKnown RBP14.64□□□□□ -0.07
PTPN20-216ENST00000506080 SPDYE2BA6NHP3 402 aa14.63□□□□□ -0.07
PTPN20-216ENST00000506080 SPDYE6P0CI01 402 aa14.63□□□□□ -0.07
PTPN20-216ENST00000506080 SPDYE2Q495Y8 402 aa14.63□□□□□ -0.07
PTPN20-216ENST00000506080 CFAP65Q6ZU64 1925 aaKnown RBP14.63□□□□□ -0.07
PTPN20-216ENST00000506080 MAST1Q9Y2H9 1570 aa14.62□□□□□ -0.07
PTPN20-216ENST00000506080 MROH1Q8NDA8 1641 aa14.62□□□□□ -0.07
PTPN20-216ENST00000506080 CEP152O94986 1710 aa14.62□□□□□ -0.07
PTPN20-216ENST00000506080 LTKP29376 864 aa14.62□□□□□ -0.07
PTPN20-216ENST00000506080 SCAF11Q99590 1463 aaKnown RBP14.62□□□□□ -0.07
PTPN20-216ENST00000506080 UBR1Q8IWV7 1749 aa14.62□□□□□ -0.07
PTPN20-216ENST00000506080 TXNDC2Q86VQ3 553 aa14.61□□□□□ -0.07
PTPN20-216ENST00000506080 EIF2AK4Q9P2K8 1649 aaKnown RBP14.61□□□□□ -0.07
PTPN20-216ENST00000506080 LRRC9Q6ZRR7 1453 aa14.6□□□□□ -0.07
PTPN20-216ENST00000506080 RGS17Q9UGC6 210 aaPredicted RBP14.6□□□□□ -0.07
PTPN20-216ENST00000506080 PITPNM1O00562 1244 aa14.59□□□□□ -0.07
PTPN20-216ENST00000506080 ARHGAP23Q9P227 1491 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms