RNA–Protein interactions for RNA: ENST00000505496.6

CTSB-205, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-205ENST00000505496 ROCK1Q13464 1354 aa13.37□□□□□ -0.27
CTSB-205ENST00000505496 CEBPAP49715 358 aaPredicted RBP13.37□□□□□ -0.27
CTSB-205ENST00000505496 CHIC2Q9UKJ5 165 aa13.37□□□□□ -0.27
CTSB-205ENST00000505496 EIF2AK4Q9P2K8 1649 aaKnown RBP13.37□□□□□ -0.27
CTSB-205ENST00000505496 RNF17Q9BXT8 1623 aaKnown RBP13.36□□□□□ -0.27
CTSB-205ENST00000505496 MROH2AA6NES4 1674 aa13.35□□□□□ -0.27
CTSB-205ENST00000505496 LMTK3Q96Q04 1460 aa13.35□□□□□ -0.27
CTSB-205ENST00000505496 KDM5DQ9BY66 1539 aa13.34□□□□□ -0.27
CTSB-205ENST00000505496 NPATQ14207 1427 aa13.34□□□□□ -0.27
CTSB-205ENST00000505496 MROH1Q8NDA8 1641 aa13.33□□□□□ -0.28
CTSB-205ENST00000505496 WASHC2CQ9Y4E1 1318 aa13.33□□□□□ -0.28
CTSB-205ENST00000505496 C3P01024 1663 aa13.32□□□□□ -0.28
CTSB-205ENST00000505496 PRDM15P57071 1507 aaPredicted RBP13.32□□□□□ -0.28
CTSB-205ENST00000505496 ANKRD50Q9ULJ7 1429 aa13.31□□□□□ -0.28
CTSB-205ENST00000505496 ABCC3O15438 1527 aa13.31□□□□□ -0.28
CTSB-205ENST00000505496 CLTCQ00610 1675 aaKnown RBP13.31□□□□□ -0.28
CTSB-205ENST00000505496 PLPPR3Q6T4P5 718 aa13.3□□□□□ -0.28
CTSB-205ENST00000505496 PZPP20742 1482 aa13.29□□□□□ -0.28
CTSB-205ENST00000505496 DEPDC5O75140 1603 aa13.29□□□□□ -0.28
CTSB-205ENST00000505496 VWDEQ8N2E2 1590 aa13.28□□□□□ -0.28
CTSB-205ENST00000505496 SETD1BQ9UPS6 1966 aaKnown RBP13.28□□□□□ -0.28
CTSB-205ENST00000505496 ARHGAP31Q2M1Z3 1444 aa13.28□□□□□ -0.28
CTSB-205ENST00000505496 UHRF1BP1Q6BDS2 1440 aa13.28□□□□□ -0.28
CTSB-205ENST00000505496 LMTK2Q8IWU2 1503 aa13.27□□□□□ -0.29
CTSB-205ENST00000505496 ZC3H13Q5T200 1668 aaKnown RBP13.27□□□□□ -0.29
CTSB-205ENST00000505496 ITGAEP38570 1179 aa13.26□□□□□ -0.29
CTSB-205ENST00000505496 PREX1Q8TCU6 1659 aa13.26□□□□□ -0.29
CTSB-205ENST00000505496 FBXO31Q5XUX0 539 aaPredicted RBP13.25□□□□□ -0.29
CTSB-205ENST00000505496 KANK1Q14678 1352 aa13.24□□□□□ -0.29
CTSB-205ENST00000505496 TNRQ92752 1358 aa13.23□□□□□ -0.29
CTSB-205ENST00000505496 HSPA2P54652 639 aa13.23□□□□□ -0.29
CTSB-205ENST00000505496 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.23□□□□□ -0.29
CTSB-205ENST00000505496 HFM1A2PYH4 1435 aa13.22□□□□□ -0.29
CTSB-205ENST00000505496 NAIPQ13075 1403 aa13.22□□□□□ -0.29
CTSB-205ENST00000505496 SPATA31D1Q6ZQQ2 1576 aa13.22□□□□□ -0.29
CTSB-205ENST00000505496 ERVK-7P63135 1459 aa13.21□□□□□ -0.3
CTSB-205ENST00000505496 CAMSAP1Q5T5Y3 1602 aa13.21□□□□□ -0.3
CTSB-205ENST00000505496 UNC13BO14795 1591 aa13.2□□□□□ -0.3
CTSB-205ENST00000505496 A2ML1A8K2U0 1454 aa13.2□□□□□ -0.3
CTSB-205ENST00000505496 NLRP1Q9C000 1473 aa13.2□□□□□ -0.3
CTSB-205ENST00000505496 MYO3AQ8NEV4 1616 aa13.2□□□□□ -0.3
CTSB-205ENST00000505496 CEP170BQ9Y4F5 1589 aaPredicted RBP13.19□□□□□ -0.3
CTSB-205ENST00000505496 CEP152O94986 1710 aa13.19□□□□□ -0.3
CTSB-205ENST00000505496 EFCAB6Q5THR3 1501 aa13.18□□□□□ -0.3
CTSB-205ENST00000505496 ZNF142P52746 1687 aaPredicted RBP13.18□□□□□ -0.3
CTSB-205ENST00000505496 RPRD2Q5VT52 1461 aaKnown RBP13.17□□□□□ -0.3
CTSB-205ENST00000505496 NOS1P29475 1434 aa13.17□□□□□ -0.3
CTSB-205ENST00000505496 PLA2R1Q13018 1463 aa13.16□□□□□ -0.3
CTSB-205ENST00000505496 NUP155O75694 1391 aa13.16□□□□□ -0.3
CTSB-205ENST00000505496 IQGAP3Q86VI3 1631 aa13.15□□□□□ -0.3
CTSB-205ENST00000505496 GCC2Q8IWJ2 1684 aa13.15□□□□□ -0.31
CTSB-205ENST00000505496 TET3O43151 1660 aa13.14□□□□□ -0.31
CTSB-205ENST00000505496 PKD2Q13563 968 aa13.13□□□□□ -0.31
CTSB-205ENST00000505496 DMRT2Q9Y5R5 561 aa13.13□□□□□ -0.31
CTSB-205ENST00000505496 PTPRTO14522 1441 aa13.13□□□□□ -0.31
CTSB-205ENST00000505496 STRCQ7RTU9 1775 aa13.12□□□□□ -0.31
CTSB-205ENST00000505496 UGGT1Q9NYU2 1555 aa13.12□□□□□ -0.31
CTSB-205ENST00000505496 THEMISQ8N1K5 641 aaPredicted RBP13.12□□□□□ -0.31
CTSB-205ENST00000505496 SLC52A1Q9NWF4 448 aa13.12□□□□□ -0.31
CTSB-205ENST00000505496 IDI1Q13907 227 aa13.11□□□□□ -0.31
CTSB-205ENST00000505496 SYNMO15061 1565 aa13.11□□□□□ -0.31
CTSB-205ENST00000505496 NCKAP5LQ9HCH0 1330 aa13.09□□□□□ -0.31
CTSB-205ENST00000505496 ARHGAP23Q9P227 1491 aa13.08□□□□□ -0.32
CTSB-205ENST00000505496 E9PCH4 1651 aa13.08□□□□□ -0.32
CTSB-205ENST00000505496 ACIN1Q9UKV3 1341 aaKnown RBP13.08□□□□□ -0.32
CTSB-205ENST00000505496 SETD5Q9C0A6 1442 aa13.07□□□□□ -0.32
CTSB-205ENST00000505496 SLIT1O75093 1534 aa13.07□□□□□ -0.32
CTSB-205ENST00000505496 KDM5AP29375 1690 aaKnown RBP13.06□□□□□ -0.32
CTSB-205ENST00000505496 MED14O60244 1454 aa13.06□□□□□ -0.32
CTSB-205ENST00000505496 ANKLE2Q86XL3 938 aa13.06□□□□□ -0.32
CTSB-205ENST00000505496 UBR1Q8IWV7 1749 aa13.05□□□□□ -0.32
CTSB-205ENST00000505496 PIK3C2BO00750 1634 aa13.05□□□□□ -0.32
CTSB-205ENST00000505496 TMEM2Q9UHN6 1383 aa13.05□□□□□ -0.32
CTSB-205ENST00000505496 CFAP65Q6ZU64 1925 aaKnown RBP13.04□□□□□ -0.32
CTSB-205ENST00000505496 NEURL4Q96JN8 1562 aa13.04□□□□□ -0.32
CTSB-205ENST00000505496 HRCP23327 699 aa13.04□□□□□ -0.32
CTSB-205ENST00000505496 TRIM52Q96A61 297 aa13.04□□□□□ -0.32
CTSB-205ENST00000505496 ADGRB3O60242 1522 aa13.03□□□□□ -0.32
CTSB-205ENST00000505496 LTKP29376 864 aa13.03□□□□□ -0.32
CTSB-205ENST00000505496 SLC4A1APQ9BWU0 796 aaKnown RBP13.02□□□□□ -0.33
CTSB-205ENST00000505496 RAB3GAP2Q9H2M9 1393 aa13.02□□□□□ -0.33
CTSB-205ENST00000505496 STAG3Q9UJ98 1225 aa13.01□□□□□ -0.33
CTSB-205ENST00000505496 NPHP4O75161 1426 aaPredicted RBP13.01□□□□□ -0.33
CTSB-205ENST00000505496 SCAF11Q99590 1463 aaKnown RBP13.01□□□□□ -0.33
CTSB-205ENST00000505496 TRPM2O94759 1503 aa13□□□□□ -0.33
CTSB-205ENST00000505496 ZFYVE9O95405 1425 aa13□□□□□ -0.33
CTSB-205ENST00000505496 TXNDC2Q86VQ3 553 aa13□□□□□ -0.33
CTSB-205ENST00000505496 MPHOSPH9Q99550 1183 aa13□□□□□ -0.33
CTSB-205ENST00000505496 TMEM131LA2VDJ0 1609 aa12.99□□□□□ -0.33
CTSB-205ENST00000505496 EID1Q9Y6B2 187 aa12.99□□□□□ -0.33
CTSB-205ENST00000505496 POLR1AO95602 1720 aaPredicted RBP12.99□□□□□ -0.33
CTSB-205ENST00000505496 LTBP4Q8N2S1 1624 aa12.98□□□□□ -0.33
CTSB-205ENST00000505496 SPHKAPQ2M3C7 1700 aa12.97□□□□□ -0.33
CTSB-205ENST00000505496 ZNF335Q9H4Z2 1342 aaPredicted RBP12.96□□□□□ -0.33
CTSB-205ENST00000505496 RIMS2Q9UQ26 1411 aa12.96□□□□□ -0.34
CTSB-205ENST00000505496 HDGFP51858 240 aaKnown RBP12.95□□□□□ -0.34
CTSB-205ENST00000505496 CERKQ8TCT0 537 aa12.95□□□□□ -0.34
CTSB-205ENST00000505496 IQGAP1P46940 1657 aa12.95□□□□□ -0.34
CTSB-205ENST00000505496 CLTCL1P53675 1640 aa12.95□□□□□ -0.34
CTSB-205ENST00000505496 FOXD1Q16676 465 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms