RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 SPAG9O60271 1321 aaKnown RBP31.33■■■□□ 2.61
PCDH1-204ENST00000503492 CCDC144AA2RUR9 1427 aa31.32■■■□□ 2.6
PCDH1-204ENST00000503492 RTEL1-TNFRSF6BF6WH68 1400 aa31.32■■■□□ 2.6
PCDH1-204ENST00000503492 FANCAO15360 1455 aa31.31■■■□□ 2.6
PCDH1-204ENST00000503492 DCAF11Q8TEB1 546 aa31.31■■■□□ 2.6
PCDH1-204ENST00000503492 KDM2AQ9Y2K7 1162 aa31.31■■■□□ 2.6
PCDH1-204ENST00000503492 ZFYVE16Q7Z3T8 1539 aa31.3■■■□□ 2.6
PCDH1-204ENST00000503492 BCORL1Q5H9F3 1711 aa31.28■■■□□ 2.6
PCDH1-204ENST00000503492 CARD11Q9BXL7 1154 aa31.23■■■□□ 2.59
PCDH1-204ENST00000503492 ATP10AO60312 1499 aa31.22■■■□□ 2.59
PCDH1-204ENST00000503492 INO80Q9ULG1 1556 aaPredicted RBP31.2■■■□□ 2.58
PCDH1-204ENST00000503492 ADGRL1O94910 1474 aa31.19■■■□□ 2.58
PCDH1-204ENST00000503492 ATP7AQ04656 1500 aa31.19■■■□□ 2.58
PCDH1-204ENST00000503492 SCAPERQ9BY12 1400 aa31.18■■■□□ 2.58
PCDH1-204ENST00000503492 RGL3Q3MIN7 710 aa31.17■■■□□ 2.58
PCDH1-204ENST00000503492 PRKRIP1Q9H875 184 aaPredicted RBP31.17■■■□□ 2.58
PCDH1-204ENST00000503492 PRAG1Q86YV5 1406 aa31.17■■■□□ 2.58
PCDH1-204ENST00000503492 A2MP01023 1474 aa31.16■■■□□ 2.58
PCDH1-204ENST00000503492 NPM1P06748 294 aaKnown RBP eCLIP31.15■■■□□ 2.58
PCDH1-204ENST00000503492 TRPM1Q7Z4N2 1603 aa31.14■■■□□ 2.57
PCDH1-204ENST00000503492 ARID4BQ4LE39 1312 aaPredicted RBP31.13■■■□□ 2.57
PCDH1-204ENST00000503492 DEPDC5O75140 1603 aa31.13■■■□□ 2.57
PCDH1-204ENST00000503492 ROCK2O75116 1388 aaKnown RBP31.12■■■□□ 2.57
PCDH1-204ENST00000503492 E9PCH4 1651 aa31.11■■■□□ 2.57
PCDH1-204ENST00000503492 CCDC184Q52MB2 194 aa31.09■■■□□ 2.57
PCDH1-204ENST00000503492 ST20-MTHFSA0A0A6YYL1 179 aa31.08■■■□□ 2.57
PCDH1-204ENST00000503492 SUPT16HQ9Y5B9 1047 aaKnown RBP31.08■■■□□ 2.57
PCDH1-204ENST00000503492 POLR3GLQ9BT43 218 aa31.07■■■□□ 2.56
PCDH1-204ENST00000503492 DHX29Q7Z478 1369 aaKnown RBP31.06■■■□□ 2.56
PCDH1-204ENST00000503492 MYT1LQ9UL68 1186 aa31.05■■■□□ 2.56
PCDH1-204ENST00000503492 VWDEQ8N2E2 1590 aa31.03■■■□□ 2.56
PCDH1-204ENST00000503492 NBPF1Q3BBV0 1214 aa31.02■■■□□ 2.56
PCDH1-204ENST00000503492 GPRASP1Q5JY77 1395 aa31.01■■■□□ 2.56
PCDH1-204ENST00000503492 TET3O43151 1660 aa31.01■■■□□ 2.55
PCDH1-204ENST00000503492 EIF2AK4Q9P2K8 1649 aaKnown RBP31.01■■■□□ 2.55
PCDH1-204ENST00000503492 KIDINS220Q9ULH0 1771 aa31■■■□□ 2.55
PCDH1-204ENST00000503492 KIF3BO15066 747 aa31■■■□□ 2.55
PCDH1-204ENST00000503492 TRPM2O94759 1503 aa31■■■□□ 2.55
PCDH1-204ENST00000503492 CD109Q6YHK3 1445 aa30.99■■■□□ 2.55
PCDH1-204ENST00000503492 PTPRTO14522 1441 aa30.99■■■□□ 2.55
PCDH1-204ENST00000503492 SPHKAPQ2M3C7 1700 aa30.98■■■□□ 2.55
PCDH1-204ENST00000503492 KANK1Q14678 1352 aa30.98■■■□□ 2.55
PCDH1-204ENST00000503492 HNRNPUQ00839 825 aaKnown RBP eCLIP30.98■■■□□ 2.55
PCDH1-204ENST00000503492 ZNF518AQ6AHZ1 1483 aa30.97■■■□□ 2.55
PCDH1-204ENST00000503492 LAMC1P11047 1609 aa30.97■■■□□ 2.55
PCDH1-204ENST00000503492 MROH1Q8NDA8 1641 aa30.96■■■□□ 2.55
PCDH1-204ENST00000503492 PRDM15P57071 1507 aaPredicted RBP30.96■■■□□ 2.55
PCDH1-204ENST00000503492 MRS2Q9HD23 443 aa30.95■■■□□ 2.54
PCDH1-204ENST00000503492 CFAP74Q9C0B2 1584 aa30.94■■■□□ 2.54
PCDH1-204ENST00000503492 CLTCL1P53675 1640 aa30.92■■■□□ 2.54
PCDH1-204ENST00000503492 CEP152O94986 1710 aa30.92■■■□□ 2.54
PCDH1-204ENST00000503492 POGZQ7Z3K3 1410 aa30.89■■■□□ 2.54
PCDH1-204ENST00000503492 FAM9BQ8IZU0 186 aa30.86■■■□□ 2.53
PCDH1-204ENST00000503492 RNF17Q9BXT8 1623 aaKnown RBP30.85■■■□□ 2.53
PCDH1-204ENST00000503492 MADDQ8WXG6 1647 aa30.84■■■□□ 2.53
PCDH1-204ENST00000503492 CNGB1Q14028 1251 aaPredicted RBP30.84■■■□□ 2.53
PCDH1-204ENST00000503492 MLH3Q9UHC1 1453 aa30.82■■■□□ 2.52
PCDH1-204ENST00000503492 TESK2Q96S53 571 aa30.8■■■□□ 2.52
PCDH1-204ENST00000503492 EFCAB6Q5THR3 1501 aa30.8■■■□□ 2.52
PCDH1-204ENST00000503492 HECW2Q9P2P5 1572 aa30.79■■■□□ 2.52
PCDH1-204ENST00000503492 COL17A1Q9UMD9 1497 aaPredicted RBP30.79■■■□□ 2.52
PCDH1-204ENST00000503492 FKBP8Q14318 412 aa30.78■■■□□ 2.52
PCDH1-204ENST00000503492 FRMPD1Q5SYB0 1578 aa30.78■■■□□ 2.52
PCDH1-204ENST00000503492 LMTK2Q8IWU2 1503 aa30.77■■■□□ 2.52
PCDH1-204ENST00000503492 PPRC1Q5VV67 1664 aaKnown RBP30.77■■■□□ 2.52
PCDH1-204ENST00000503492 STAC3Q96MF2 364 aa30.76■■■□□ 2.51
PCDH1-204ENST00000503492 NEO1Q92859 1461 aa30.76■■■□□ 2.51
PCDH1-204ENST00000503492 DISP3Q9P2K9 1392 aa30.75■■■□□ 2.51
PCDH1-204ENST00000503492 NEURL4Q96JN8 1562 aa30.75■■■□□ 2.51
PCDH1-204ENST00000503492 UGGT1Q9NYU2 1555 aa30.74■■■□□ 2.51
PCDH1-204ENST00000503492 PELP1Q8IZL8 1130 aaKnown RBP30.72■■■□□ 2.51
PCDH1-204ENST00000503492 ABCA6Q8N139 1617 aa30.72■■■□□ 2.51
PCDH1-204ENST00000503492 IQGAP1P46940 1657 aa30.7■■■□□ 2.51
PCDH1-204ENST00000503492 NEFLP07196 543 aa30.69■■■□□ 2.5
PCDH1-204ENST00000503492 RAPGEF3O95398 923 aa30.69■■■□□ 2.5
PCDH1-204ENST00000503492 ZBED9Q6R2W3 1325 aa30.67■■■□□ 2.5
PCDH1-204ENST00000503492 KIF1BO60333 1816 aa30.66■■■□□ 2.5
PCDH1-204ENST00000503492 CYB5RLQ6IPT4 315 aa30.66■■■□□ 2.5
PCDH1-204ENST00000503492 KTN1Q86UP2 1357 aaKnown RBP30.66■■■□□ 2.5
PCDH1-204ENST00000503492 TMF1P82094 1093 aa30.66■■■□□ 2.5
PCDH1-204ENST00000503492 MAP3K4Q9Y6R4 1608 aa30.65■■■□□ 2.5
PCDH1-204ENST00000503492 RALBP1Q15311 655 aa30.64■■■□□ 2.5
PCDH1-204ENST00000503492 GGT6Q6P531 493 aa30.64■■■□□ 2.5
PCDH1-204ENST00000503492 BCANQ96GW7 911 aa30.64■■■□□ 2.5
PCDH1-204ENST00000503492 PER1O15534 1290 aaPredicted RBP30.63■■■□□ 2.49
PCDH1-204ENST00000503492 SCAF11Q99590 1463 aaKnown RBP30.62■■■□□ 2.49
PCDH1-204ENST00000503492 KIAA1210Q9ULL0 1709 aa30.61■■■□□ 2.49
PCDH1-204ENST00000503492 MYBBP1AQ9BQG0 1328 aaKnown RBP30.61■■■□□ 2.49
PCDH1-204ENST00000503492 NPATQ14207 1427 aa30.61■■■□□ 2.49
PCDH1-204ENST00000503492 MROH2AA6NES4 1674 aa30.61■■■□□ 2.49
PCDH1-204ENST00000503492 MYOM2P54296 1465 aa30.61■■■□□ 2.49
PCDH1-204ENST00000503492 TMC1Q8TDI8 760 aa30.6■■■□□ 2.49
PCDH1-204ENST00000503492 PNISRQ8TF01 805 aaKnown RBP30.6■■■□□ 2.49
PCDH1-204ENST00000503492 RICTORQ6R327 1708 aa30.59■■■□□ 2.49
PCDH1-204ENST00000503492 IFT172Q9UG01 1749 aa30.59■■■□□ 2.49
PCDH1-204ENST00000503492 DIP2CQ9Y2E4 1556 aa30.59■■■□□ 2.49
PCDH1-204ENST00000503492 RIMBP3CA6NJZ7 1639 aa30.58■■■□□ 2.49
PCDH1-204ENST00000503492 RIMBP3BA6NNM3 1639 aa30.58■■■□□ 2.49
PCDH1-204ENST00000503492 RIMBP3Q9UFD9 1639 aa30.58■■■□□ 2.49
PCDH1-204ENST00000503492 BRD4O60885 1362 aaPredicted RBP30.57■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms