RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 RICTORQ6R327 1708 aa11.8□□□□□ -0.52
TOPBP1-202ENST00000503338 KANK1Q14678 1352 aa11.79□□□□□ -0.52
TOPBP1-202ENST00000503338 TSPOAP1O95153 1857 aa11.78□□□□□ -0.52
TOPBP1-202ENST00000503338 FAM135AQ9P2D6 1515 aa11.77□□□□□ -0.52
TOPBP1-202ENST00000503338 PKD2Q13563 968 aa11.77□□□□□ -0.53
TOPBP1-202ENST00000503338 ANKRD30BQ9BXX2 1392 aa11.77□□□□□ -0.53
TOPBP1-202ENST00000503338 IQGAP3Q86VI3 1631 aa11.76□□□□□ -0.53
TOPBP1-202ENST00000503338 KIF3BO15066 747 aa11.76□□□□□ -0.53
TOPBP1-202ENST00000503338 FRMPD1Q5SYB0 1578 aa11.75□□□□□ -0.53
TOPBP1-202ENST00000503338 TRHP20396 242 aaPredicted RBP11.75□□□□□ -0.53
TOPBP1-202ENST00000503338 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.75□□□□□ -0.53
TOPBP1-202ENST00000503338 TONSLQ96HA7 1378 aa11.75□□□□□ -0.53
TOPBP1-202ENST00000503338 DEPDC5O75140 1603 aa11.75□□□□□ -0.53
TOPBP1-202ENST00000503338 BCORL1Q5H9F3 1711 aa11.74□□□□□ -0.53
TOPBP1-202ENST00000503338 NEUROD1Q13562 356 aa11.74□□□□□ -0.53
TOPBP1-202ENST00000503338 ATP10AO60312 1499 aa11.74□□□□□ -0.53
TOPBP1-202ENST00000503338 PRDM15P57071 1507 aaPredicted RBP11.74□□□□□ -0.53
TOPBP1-202ENST00000503338 DIP2CQ9Y2E4 1556 aa11.74□□□□□ -0.53
TOPBP1-202ENST00000503338 ABCA6Q8N139 1617 aa11.73□□□□□ -0.53
TOPBP1-202ENST00000503338 SIN3AQ96ST3 1273 aa11.73□□□□□ -0.53
TOPBP1-202ENST00000503338 REREQ9P2R6 1566 aa11.73□□□□□ -0.53
TOPBP1-202ENST00000503338 RNF17Q9BXT8 1623 aaKnown RBP11.72□□□□□ -0.53
TOPBP1-202ENST00000503338 VWDEQ8N2E2 1590 aa11.72□□□□□ -0.53
TOPBP1-202ENST00000503338 PPP6R1Q9UPN7 881 aa11.72□□□□□ -0.53
TOPBP1-202ENST00000503338 RPRD2Q5VT52 1461 aaKnown RBP11.71□□□□□ -0.53
TOPBP1-202ENST00000503338 YEATS2Q9ULM3 1422 aa11.71□□□□□ -0.53
TOPBP1-202ENST00000503338 AGLP35573 1532 aa11.7□□□□□ -0.54
TOPBP1-202ENST00000503338 LMTK2Q8IWU2 1503 aa11.7□□□□□ -0.54
TOPBP1-202ENST00000503338 FOXD1Q16676 465 aa11.7□□□□□ -0.54
TOPBP1-202ENST00000503338 COL17A1Q9UMD9 1497 aaPredicted RBP11.69□□□□□ -0.54
TOPBP1-202ENST00000503338 TET3O43151 1660 aa11.68□□□□□ -0.54
TOPBP1-202ENST00000503338 ARHGEF40Q8TER5 1519 aa11.68□□□□□ -0.54
TOPBP1-202ENST00000503338 CCDC144AA2RUR9 1427 aa11.68□□□□□ -0.54
TOPBP1-202ENST00000503338 MROH1Q8NDA8 1641 aa11.68□□□□□ -0.54
TOPBP1-202ENST00000503338 PPP1R15AO75807 674 aaPredicted RBP11.67□□□□□ -0.54
TOPBP1-202ENST00000503338 GGT6Q6P531 493 aa11.67□□□□□ -0.54
TOPBP1-202ENST00000503338 WASHC2CQ9Y4E1 1318 aa11.66□□□□□ -0.54
TOPBP1-202ENST00000503338 PTPRTO14522 1441 aa11.65□□□□□ -0.54
TOPBP1-202ENST00000503338 EFCAB6Q5THR3 1501 aa11.65□□□□□ -0.55
TOPBP1-202ENST00000503338 ZC3H13Q5T200 1668 aaKnown RBP11.65□□□□□ -0.55
TOPBP1-202ENST00000503338 ARHGAP31Q2M1Z3 1444 aa11.63□□□□□ -0.55
TOPBP1-202ENST00000503338 STAC3Q96MF2 364 aa11.63□□□□□ -0.55
TOPBP1-202ENST00000503338 ABCC3O15438 1527 aa11.63□□□□□ -0.55
TOPBP1-202ENST00000503338 TRPM2O94759 1503 aa11.62□□□□□ -0.55
TOPBP1-202ENST00000503338 L3MBTL2Q969R5 705 aa11.62□□□□□ -0.55
TOPBP1-202ENST00000503338 PLA2R1Q13018 1463 aa11.62□□□□□ -0.55
TOPBP1-202ENST00000503338 E9PCH4 1651 aa11.62□□□□□ -0.55
TOPBP1-202ENST00000503338 CNTLNQ9NXG0 1405 aa11.6□□□□□ -0.55
TOPBP1-202ENST00000503338 NEURL4Q96JN8 1562 aa11.59□□□□□ -0.55
TOPBP1-202ENST00000503338 ZNF316A6NFI3 1004 aaPredicted RBP11.59□□□□□ -0.55
TOPBP1-202ENST00000503338 ESF1Q9H501 851 aaKnown RBP11.59□□□□□ -0.55
TOPBP1-202ENST00000503338 SPHKAPQ2M3C7 1700 aa11.59□□□□□ -0.55
TOPBP1-202ENST00000503338 NPATQ14207 1427 aa11.59□□□□□ -0.55
TOPBP1-202ENST00000503338 CEP152O94986 1710 aa11.58□□□□□ -0.56
TOPBP1-202ENST00000503338 CAMSAP1Q5T5Y3 1602 aa11.57□□□□□ -0.56
TOPBP1-202ENST00000503338 ARID4BQ4LE39 1312 aaPredicted RBP11.57□□□□□ -0.56
TOPBP1-202ENST00000503338 NOS1P29475 1434 aa11.56□□□□□ -0.56
TOPBP1-202ENST00000503338 UHRF1BP1Q6BDS2 1440 aa11.56□□□□□ -0.56
TOPBP1-202ENST00000503338 SLC52A1Q9NWF4 448 aa11.56□□□□□ -0.56
TOPBP1-202ENST00000503338 SPATA31E1Q6ZUB1 1445 aa11.54□□□□□ -0.56
TOPBP1-202ENST00000503338 DCAF11Q8TEB1 546 aa11.54□□□□□ -0.56
TOPBP1-202ENST00000503338 CLTCL1P53675 1640 aa11.53□□□□□ -0.56
TOPBP1-202ENST00000503338 MLECQ14165 292 aa11.52□□□□□ -0.57
TOPBP1-202ENST00000503338 RGL3Q3MIN7 710 aa11.52□□□□□ -0.57
TOPBP1-202ENST00000503338 RPGRIP1LQ68CZ1 1315 aa11.52□□□□□ -0.57
TOPBP1-202ENST00000503338 ZMYM3Q14202 1370 aa11.51□□□□□ -0.57
TOPBP1-202ENST00000503338 ERVK-7P63135 1459 aa11.51□□□□□ -0.57
TOPBP1-202ENST00000503338 SIGLEC1Q9BZZ2 1709 aa11.49□□□□□ -0.57
TOPBP1-202ENST00000503338 KIF1BO60333 1816 aa11.49□□□□□ -0.57
TOPBP1-202ENST00000503338 EIF4G2P78344 907 aaKnown RBP eCLIP11.49□□□□□ -0.57
TOPBP1-202ENST00000503338 NBPF8Q3BBV2 869 aa11.49□□□□□ -0.57
TOPBP1-202ENST00000503338 KDM2AQ9Y2K7 1162 aa11.49□□□□□ -0.57
TOPBP1-202ENST00000503338 PRAG1Q86YV5 1406 aa11.49□□□□□ -0.57
TOPBP1-202ENST00000503338 RALGAPBQ86X10 1494 aa11.49□□□□□ -0.57
TOPBP1-202ENST00000503338 ADGRB3O60242 1522 aa11.49□□□□□ -0.57
TOPBP1-202ENST00000503338 CLTCQ00610 1675 aaKnown RBP11.49□□□□□ -0.57
TOPBP1-202ENST00000503338 SPATA31D1Q6ZQQ2 1576 aa11.48□□□□□ -0.57
TOPBP1-202ENST00000503338 PIK3C2BO00750 1634 aa11.48□□□□□ -0.57
TOPBP1-202ENST00000503338 MROH2AA6NES4 1674 aa11.48□□□□□ -0.57
TOPBP1-202ENST00000503338 PREX1Q8TCU6 1659 aa11.48□□□□□ -0.57
TOPBP1-202ENST00000503338 SYNMO15061 1565 aa11.47□□□□□ -0.57
TOPBP1-202ENST00000503338 MYOM2P54296 1465 aa11.47□□□□□ -0.57
TOPBP1-202ENST00000503338 ZNF326Q5BKZ1 582 aaKnown RBP11.47□□□□□ -0.57
TOPBP1-202ENST00000503338 CHGAP10645 457 aaKnown RBP11.46□□□□□ -0.57
TOPBP1-202ENST00000503338 IDI1Q13907 227 aa11.46□□□□□ -0.57
TOPBP1-202ENST00000503338 UGGT1Q9NYU2 1555 aa11.45□□□□□ -0.58
TOPBP1-202ENST00000503338 ROCK2O75116 1388 aaKnown RBP11.45□□□□□ -0.58
TOPBP1-202ENST00000503338 GPRASP1Q5JY77 1395 aa11.44□□□□□ -0.58
TOPBP1-202ENST00000503338 VGFO15240 615 aaPredicted RBP11.44□□□□□ -0.58
TOPBP1-202ENST00000503338 FBXO31Q5XUX0 539 aaPredicted RBP11.44□□□□□ -0.58
TOPBP1-202ENST00000503338 CARD11Q9BXL7 1154 aa11.44□□□□□ -0.58
TOPBP1-202ENST00000503338 STAG3Q9UJ98 1225 aa11.44□□□□□ -0.58
TOPBP1-202ENST00000503338 CFAP65Q6ZU64 1925 aaKnown RBP11.44□□□□□ -0.58
TOPBP1-202ENST00000503338 TNRQ92752 1358 aa11.43□□□□□ -0.58
TOPBP1-202ENST00000503338 ZFYVE9O95405 1425 aa11.43□□□□□ -0.58
TOPBP1-202ENST00000503338 HSPA5P11021 654 aaKnown RBP11.42□□□□□ -0.58
TOPBP1-202ENST00000503338 HDGFP51858 240 aaKnown RBP11.42□□□□□ -0.58
TOPBP1-202ENST00000503338 NRXN1Q9ULB1 1477 aa11.42□□□□□ -0.58
TOPBP1-202ENST00000503338 LAMC1P11047 1609 aa11.42□□□□□ -0.58
TOPBP1-202ENST00000503338 USP47Q96K76 1375 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms