RNA–Protein interactions for RNA: ENST00000500869.6

LYSMD3-203, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 3,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-203ENST00000500869 CHMP7Q8WUX9 453 aaPredicted RBP9.95□□□□□ -0.82
LYSMD3-203ENST00000500869 ERBINQ96RT1 1412 aa9.95□□□□□ -0.82
LYSMD3-203ENST00000500869 KIF15Q9NS87 1388 aa9.95□□□□□ -0.82
LYSMD3-203ENST00000500869 PRAG1Q86YV5 1406 aa9.95□□□□□ -0.82
LYSMD3-203ENST00000500869 SYCP2Q9BX26 1530 aa9.95□□□□□ -0.82
LYSMD3-203ENST00000500869 FOXD1Q16676 465 aa9.95□□□□□ -0.82
LYSMD3-203ENST00000500869 ANP32EQ9BTT0 268 aa9.95□□□□□ -0.82
LYSMD3-203ENST00000500869 HNRNPUQ00839 825 aaKnown RBP eCLIP9.94□□□□□ -0.82
LYSMD3-203ENST00000500869 IQGAP1P46940 1657 aa9.94□□□□□ -0.82
LYSMD3-203ENST00000500869 FANCIQ9NVI1 1328 aa9.94□□□□□ -0.82
LYSMD3-203ENST00000500869 ABCC1P33527 1531 aa9.94□□□□□ -0.82
LYSMD3-203ENST00000500869 CEP152O94986 1710 aa9.93□□□□□ -0.82
LYSMD3-203ENST00000500869 KIAA1210Q9ULL0 1709 aa9.93□□□□□ -0.82
LYSMD3-203ENST00000500869 PLA2R1Q13018 1463 aa9.93□□□□□ -0.82
LYSMD3-203ENST00000500869 CCDC184Q52MB2 194 aa9.93□□□□□ -0.82
LYSMD3-203ENST00000500869 SPHKAPQ2M3C7 1700 aa9.93□□□□□ -0.82
LYSMD3-203ENST00000500869 ZCCHC11Q5TAX3 1644 aaKnown RBP9.93□□□□□ -0.82
LYSMD3-203ENST00000500869 COL17A1Q9UMD9 1497 aaPredicted RBP9.93□□□□□ -0.82
LYSMD3-203ENST00000500869 PLEKHD1A6NEE1 506 aa9.92□□□□□ -0.82
LYSMD3-203ENST00000500869 PKD2Q13563 968 aa9.92□□□□□ -0.82
LYSMD3-203ENST00000500869 RBM19Q9Y4C8 960 aaKnown RBP9.92□□□□□ -0.82
LYSMD3-203ENST00000500869 VWDEQ8N2E2 1590 aa9.91□□□□□ -0.82
LYSMD3-203ENST00000500869 PPP4R2Q9NY27 417 aa9.91□□□□□ -0.82
LYSMD3-203ENST00000500869 BRD4O60885 1362 aaPredicted RBP9.91□□□□□ -0.82
LYSMD3-203ENST00000500869 NUP155O75694 1391 aa9.91□□□□□ -0.82
LYSMD3-203ENST00000500869 A2MP01023 1474 aa9.91□□□□□ -0.82
LYSMD3-203ENST00000500869 MADDQ8WXG6 1647 aa9.91□□□□□ -0.82
LYSMD3-203ENST00000500869 TRPM2O94759 1503 aa9.89□□□□□ -0.83
LYSMD3-203ENST00000500869 WDR7Q9Y4E6 1490 aa9.89□□□□□ -0.83
LYSMD3-203ENST00000500869 ABCA9Q8IUA7 1624 aa9.89□□□□□ -0.83
LYSMD3-203ENST00000500869 ARHGAP5Q13017 1502 aa9.89□□□□□ -0.83
LYSMD3-203ENST00000500869 PARD3Q8TEW0 1356 aa9.89□□□□□ -0.83
LYSMD3-203ENST00000500869 INO80Q9ULG1 1556 aaPredicted RBP9.88□□□□□ -0.83
LYSMD3-203ENST00000500869 MRS2Q9HD23 443 aa9.88□□□□□ -0.83
LYSMD3-203ENST00000500869 TET3O43151 1660 aa9.88□□□□□ -0.83
LYSMD3-203ENST00000500869 BCANQ96GW7 911 aa9.88□□□□□ -0.83
LYSMD3-203ENST00000500869 RTEL1-TNFRSF6BF6WH68 1400 aa9.88□□□□□ -0.83
LYSMD3-203ENST00000500869 ZFYVE16Q7Z3T8 1539 aa9.87□□□□□ -0.83
LYSMD3-203ENST00000500869 IFT172Q9UG01 1749 aa9.87□□□□□ -0.83
LYSMD3-203ENST00000500869 WASHC2CQ9Y4E1 1318 aa9.87□□□□□ -0.83
LYSMD3-203ENST00000500869 PLCH2O75038 1416 aa9.87□□□□□ -0.83
LYSMD3-203ENST00000500869 ARID3CA6NKF2 412 aa9.86□□□□□ -0.83
LYSMD3-203ENST00000500869 BLMP54132 1417 aaPredicted RBP9.86□□□□□ -0.83
LYSMD3-203ENST00000500869 SYNMO15061 1565 aa9.86□□□□□ -0.83
LYSMD3-203ENST00000500869 RALBP1Q15311 655 aa9.85□□□□□ -0.83
LYSMD3-203ENST00000500869 PNISRQ8TF01 805 aaKnown RBP9.85□□□□□ -0.83
LYSMD3-203ENST00000500869 CCDC144AA2RUR9 1427 aa9.85□□□□□ -0.83
LYSMD3-203ENST00000500869 MYOM1P52179 1685 aa9.85□□□□□ -0.83
LYSMD3-203ENST00000500869 ERCC6L2Q5T890 1561 aa9.85□□□□□ -0.83
LYSMD3-203ENST00000500869 NUDCQ9Y266 331 aa9.85□□□□□ -0.83
LYSMD3-203ENST00000500869 TSPY4P0CV99 314 aa9.85□□□□□ -0.83
LYSMD3-203ENST00000500869 TSPY10P0CW01 314 aa9.85□□□□□ -0.83
LYSMD3-203ENST00000500869 PTPRTO14522 1441 aa9.85□□□□□ -0.83
LYSMD3-203ENST00000500869 MYO3AQ8NEV4 1616 aa9.85□□□□□ -0.83
LYSMD3-203ENST00000500869 MYBBP1AQ9BQG0 1328 aaKnown RBP9.84□□□□□ -0.83
LYSMD3-203ENST00000500869 SCAPERQ9BY12 1400 aa9.84□□□□□ -0.83
LYSMD3-203ENST00000500869 MROH1Q8NDA8 1641 aa9.83□□□□□ -0.84
LYSMD3-203ENST00000500869 CLTCL1P53675 1640 aa9.82□□□□□ -0.84
LYSMD3-203ENST00000500869 STAC3Q96MF2 364 aa9.81□□□□□ -0.84
LYSMD3-203ENST00000500869 CARD11Q9BXL7 1154 aa9.81□□□□□ -0.84
LYSMD3-203ENST00000500869 ZNF777Q9ULD5 760 aaPredicted RBP9.81□□□□□ -0.84
LYSMD3-203ENST00000500869 LMTK2Q8IWU2 1503 aa9.8□□□□□ -0.84
LYSMD3-203ENST00000500869 MYOM2P54296 1465 aa9.8□□□□□ -0.84
LYSMD3-203ENST00000500869 HNRNPMP52272 730 aaKnown RBP eCLIP9.8□□□□□ -0.84
LYSMD3-203ENST00000500869 FAM9BQ8IZU0 186 aa9.79□□□□□ -0.84
LYSMD3-203ENST00000500869 PER1O15534 1290 aaPredicted RBP9.79□□□□□ -0.84
LYSMD3-203ENST00000500869 MSH5O43196 834 aa9.79□□□□□ -0.84
LYSMD3-203ENST00000500869 ZC3H13Q5T200 1668 aaKnown RBP9.78□□□□□ -0.84
LYSMD3-203ENST00000500869 PDE3BQ13370 1112 aa9.78□□□□□ -0.84
LYSMD3-203ENST00000500869 TESK2Q96S53 571 aa9.78□□□□□ -0.84
LYSMD3-203ENST00000500869 NPC1L1Q9UHC9 1359 aa9.78□□□□□ -0.84
LYSMD3-203ENST00000500869 NRXN1Q9ULB1 1477 aa9.78□□□□□ -0.84
LYSMD3-203ENST00000500869 MAP3K4Q9Y6R4 1608 aa9.77□□□□□ -0.85
LYSMD3-203ENST00000500869 ATP7AQ04656 1500 aa9.77□□□□□ -0.85
LYSMD3-203ENST00000500869 KDM5AP29375 1690 aaKnown RBP9.77□□□□□ -0.85
LYSMD3-203ENST00000500869 ST20-MTHFSA0A0A6YYL1 179 aa9.77□□□□□ -0.85
LYSMD3-203ENST00000500869 SETBP1Q9Y6X0 1596 aa9.76□□□□□ -0.85
LYSMD3-203ENST00000500869 NLRP13Q86W25 1043 aa9.76□□□□□ -0.85
LYSMD3-203ENST00000500869 DISP3Q9P2K9 1392 aa9.75□□□□□ -0.85
LYSMD3-203ENST00000500869 CFAP74Q9C0B2 1584 aa9.75□□□□□ -0.85
LYSMD3-203ENST00000500869 USP32Q8NFA0 1604 aa9.75□□□□□ -0.85
LYSMD3-203ENST00000500869 EFCAB6Q5THR3 1501 aa9.75□□□□□ -0.85
LYSMD3-203ENST00000500869 ABCA6Q8N139 1617 aa9.75□□□□□ -0.85
LYSMD3-203ENST00000500869 TRAPPC8Q9Y2L5 1435 aa9.75□□□□□ -0.85
LYSMD3-203ENST00000500869 SCAF11Q99590 1463 aaKnown RBP9.75□□□□□ -0.85
LYSMD3-203ENST00000500869 KIF1BO60333 1816 aa9.75□□□□□ -0.85
LYSMD3-203ENST00000500869 DCAF11Q8TEB1 546 aa9.75□□□□□ -0.85
LYSMD3-203ENST00000500869 FBLN2P98095 1184 aa9.74□□□□□ -0.85
LYSMD3-203ENST00000500869 PIK3C2GO75747 1445 aa9.74□□□□□ -0.85
LYSMD3-203ENST00000500869 MROH2AA6NES4 1674 aa9.73□□□□□ -0.85
LYSMD3-203ENST00000500869 MYT1LQ9UL68 1186 aa9.73□□□□□ -0.85
LYSMD3-203ENST00000500869 KIDINS220Q9ULH0 1771 aa9.73□□□□□ -0.85
LYSMD3-203ENST00000500869 ADGRB3O60242 1522 aa9.72□□□□□ -0.85
LYSMD3-203ENST00000500869 ASXL1Q8IXJ9 1541 aa9.72□□□□□ -0.85
LYSMD3-203ENST00000500869 PPRC1Q5VV67 1664 aaKnown RBP9.72□□□□□ -0.85
LYSMD3-203ENST00000500869 IRX6P78412 446 aaPredicted RBP9.72□□□□□ -0.85
LYSMD3-203ENST00000500869 TMC1Q8TDI8 760 aa9.71□□□□□ -0.85
LYSMD3-203ENST00000500869 PPLO60437 1756 aa9.71□□□□□ -0.85
LYSMD3-203ENST00000500869 FANCAO15360 1455 aa9.71□□□□□ -0.86
LYSMD3-203ENST00000500869 SBNO2Q9Y2G9 1366 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 200 ms