RNA–Protein interactions for RNA: ENST00000497415.1

RPN1-208, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 547 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-208ENST00000497415 DUOX2Q9NRD8 1548 aa28.93■■■□□ 2.22
RPN1-208ENST00000497415 RNF17Q9BXT8 1623 aaKnown RBP28.91■■■□□ 2.22
RPN1-208ENST00000497415 KDM5DQ9BY66 1539 aa28.89■■■□□ 2.21
RPN1-208ENST00000497415 KIF15Q9NS87 1388 aa28.88■■■□□ 2.21
RPN1-208ENST00000497415 PTPRKQ15262 1439 aa28.88■■■□□ 2.21
RPN1-208ENST00000497415 FAM50AQ14320 339 aaKnown RBP28.85■■■□□ 2.21
RPN1-208ENST00000497415 RRP7BPQ9NSQ0 103 aa28.85■■■□□ 2.21
RPN1-208ENST00000497415 WASHC2CQ9Y4E1 1318 aa28.85■■■□□ 2.21
RPN1-208ENST00000497415 ANKRD30AQ9BXX3 1397 aa28.83■■■□□ 2.21
RPN1-208ENST00000497415 ERBINQ96RT1 1412 aa28.83■■■□□ 2.21
RPN1-208ENST00000497415 MROH1Q8NDA8 1641 aa28.83■■■□□ 2.21
RPN1-208ENST00000497415 CHIC2Q9UKJ5 165 aa28.82■■■□□ 2.2
RPN1-208ENST00000497415 NCOA1Q15788 1441 aa28.82■■■□□ 2.2
RPN1-208ENST00000497415 ADGRL2O95490 1459 aa28.82■■■□□ 2.2
RPN1-208ENST00000497415 PPARGC1BQ86YN6 1023 aaKnown RBP28.8■■■□□ 2.2
RPN1-208ENST00000497415 ZC3H13Q5T200 1668 aaKnown RBP28.79■■■□□ 2.2
RPN1-208ENST00000497415 PZPP20742 1482 aa28.78■■■□□ 2.2
RPN1-208ENST00000497415 ABCC3O15438 1527 aa28.77■■■□□ 2.2
RPN1-208ENST00000497415 MYO3AQ8NEV4 1616 aa28.76■■■□□ 2.2
RPN1-208ENST00000497415 STRCQ7RTU9 1775 aa28.75■■■□□ 2.19
RPN1-208ENST00000497415 ZNF142P52746 1687 aaPredicted RBP28.74■■■□□ 2.19
RPN1-208ENST00000497415 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.74■■■□□ 2.19
RPN1-208ENST00000497415 PRDM15P57071 1507 aaPredicted RBP28.74■■■□□ 2.19
RPN1-208ENST00000497415 DEPDC5O75140 1603 aa28.73■■■□□ 2.19
RPN1-208ENST00000497415 FBXO31Q5XUX0 539 aaPredicted RBP28.73■■■□□ 2.19
RPN1-208ENST00000497415 CEP152O94986 1710 aa28.71■■■□□ 2.19
RPN1-208ENST00000497415 CEP170BQ9Y4F5 1589 aaPredicted RBP28.7■■■□□ 2.18
RPN1-208ENST00000497415 TNRQ92752 1358 aa28.68■■■□□ 2.18
RPN1-208ENST00000497415 CAMSAP1Q5T5Y3 1602 aa28.67■■■□□ 2.18
RPN1-208ENST00000497415 A2ML1A8K2U0 1454 aa28.66■■■□□ 2.18
RPN1-208ENST00000497415 DMRT2Q9Y5R5 561 aa28.65■■■□□ 2.18
RPN1-208ENST00000497415 ROCK1Q13464 1354 aa28.63■■■□□ 2.17
RPN1-208ENST00000497415 SPATA31D1Q6ZQQ2 1576 aa28.63■■■□□ 2.17
RPN1-208ENST00000497415 ANKRD50Q9ULJ7 1429 aa28.63■■■□□ 2.17
RPN1-208ENST00000497415 VWDEQ8N2E2 1590 aa28.62■■■□□ 2.17
RPN1-208ENST00000497415 ARHGAP31Q2M1Z3 1444 aa28.62■■■□□ 2.17
RPN1-208ENST00000497415 RRBP1Q9P2E9 1410 aaKnown RBP28.62■■■□□ 2.17
RPN1-208ENST00000497415 KANK1Q14678 1352 aa28.62■■■□□ 2.17
RPN1-208ENST00000497415 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.61■■■□□ 2.17
RPN1-208ENST00000497415 PLA2R1Q13018 1463 aa28.6■■■□□ 2.17
RPN1-208ENST00000497415 PTPRTO14522 1441 aa28.6■■■□□ 2.17
RPN1-208ENST00000497415 ERVK-7P63135 1459 aa28.59■■■□□ 2.17
RPN1-208ENST00000497415 LMTK2Q8IWU2 1503 aa28.59■■■□□ 2.17
RPN1-208ENST00000497415 NLRP1Q9C000 1473 aa28.59■■■□□ 2.17
RPN1-208ENST00000497415 CFAP65Q6ZU64 1925 aaKnown RBP28.58■■■□□ 2.17
RPN1-208ENST00000497415 ITGAEP38570 1179 aa28.54■■■□□ 2.16
RPN1-208ENST00000497415 PKD2Q13563 968 aa28.52■■■□□ 2.16
RPN1-208ENST00000497415 NCKAP5LQ9HCH0 1330 aa28.51■■■□□ 2.15
RPN1-208ENST00000497415 UGGT1Q9NYU2 1555 aa28.5■■■□□ 2.15
RPN1-208ENST00000497415 UNC13BO14795 1591 aa28.49■■■□□ 2.15
RPN1-208ENST00000497415 THEMISQ8N1K5 641 aaPredicted RBP28.48■■■□□ 2.15
RPN1-208ENST00000497415 EFCAB6Q5THR3 1501 aa28.47■■■□□ 2.15
RPN1-208ENST00000497415 ILDR1Q86SU0 546 aaPredicted RBP28.45■■■□□ 2.14
RPN1-208ENST00000497415 POLR1AO95602 1720 aaPredicted RBP28.43■■■□□ 2.14
RPN1-208ENST00000497415 TET3O43151 1660 aa28.42■■■□□ 2.14
RPN1-208ENST00000497415 UBR1Q8IWV7 1749 aa28.4■■■□□ 2.14
RPN1-208ENST00000497415 CERKQ8TCT0 537 aa28.4■■■□□ 2.14
RPN1-208ENST00000497415 NOS1P29475 1434 aa28.4■■■□□ 2.14
RPN1-208ENST00000497415 RPRD2Q5VT52 1461 aaKnown RBP28.4■■■□□ 2.14
RPN1-208ENST00000497415 NEURL4Q96JN8 1562 aa28.39■■■□□ 2.14
RPN1-208ENST00000497415 GCC2Q8IWJ2 1684 aa28.38■■■□□ 2.13
RPN1-208ENST00000497415 ANKLE2Q86XL3 938 aa28.38■■■□□ 2.13
RPN1-208ENST00000497415 SYNMO15061 1565 aa28.37■■■□□ 2.13
RPN1-208ENST00000497415 IQGAP3Q86VI3 1631 aa28.37■■■□□ 2.13
RPN1-208ENST00000497415 FBXO41Q8TF61 875 aa28.37■■■□□ 2.13
RPN1-208ENST00000497415 LTBP4Q8N2S1 1624 aa28.36■■■□□ 2.13
RPN1-208ENST00000497415 PIK3C2BO00750 1634 aa28.34■■■□□ 2.13
RPN1-208ENST00000497415 MED14O60244 1454 aa28.34■■■□□ 2.13
RPN1-208ENST00000497415 NAIPQ13075 1403 aa28.33■■■□□ 2.13
RPN1-208ENST00000497415 KDM5AP29375 1690 aaKnown RBP28.32■■■□□ 2.12
RPN1-208ENST00000497415 IDI1Q13907 227 aa28.32■■■□□ 2.12
RPN1-208ENST00000497415 NUP155O75694 1391 aa28.32■■■□□ 2.12
RPN1-208ENST00000497415 E9PCH4 1651 aa28.3■■■□□ 2.12
RPN1-208ENST00000497415 ARHGAP23Q9P227 1491 aa28.3■■■□□ 2.12
RPN1-208ENST00000497415 SLIT1O75093 1534 aa28.29■■■□□ 2.12
RPN1-208ENST00000497415 SLC52A1Q9NWF4 448 aa28.29■■■□□ 2.12
RPN1-208ENST00000497415 HFM1A2PYH4 1435 aa28.27■■■□□ 2.12
RPN1-208ENST00000497415 NPHP4O75161 1426 aaPredicted RBP28.27■■■□□ 2.12
RPN1-208ENST00000497415 ZNF335Q9H4Z2 1342 aaPredicted RBP28.27■■■□□ 2.12
RPN1-208ENST00000497415 IQGAP1P46940 1657 aa28.24■■■□□ 2.11
RPN1-208ENST00000497415 SCAF11Q99590 1463 aaKnown RBP28.23■■■□□ 2.11
RPN1-208ENST00000497415 STAG3Q9UJ98 1225 aa28.23■■■□□ 2.11
RPN1-208ENST00000497415 TMEM2Q9UHN6 1383 aa28.23■■■□□ 2.11
RPN1-208ENST00000497415 ADGRB3O60242 1522 aa28.22■■■□□ 2.11
RPN1-208ENST00000497415 LTKP29376 864 aa28.21■■■□□ 2.11
RPN1-208ENST00000497415 IQSEC2Q5JU85 1478 aa28.21■■■□□ 2.11
RPN1-208ENST00000497415 TXNDC2Q86VQ3 553 aa28.2■■■□□ 2.1
RPN1-208ENST00000497415 EID1Q9Y6B2 187 aa28.17■■■□□ 2.1
RPN1-208ENST00000497415 TMEM131LA2VDJ0 1609 aa28.14■■■□□ 2.1
RPN1-208ENST00000497415 MYO5BQ9ULV0 1848 aa28.14■■■□□ 2.1
RPN1-208ENST00000497415 CPS1P31327 1500 aa28.12■■■□□ 2.09
RPN1-208ENST00000497415 SPHKAPQ2M3C7 1700 aa28.11■■■□□ 2.09
RPN1-208ENST00000497415 TRIM52Q96A61 297 aa28.07■■■□□ 2.08
RPN1-208ENST00000497415 ZFYVE9O95405 1425 aa28.07■■■□□ 2.08
RPN1-208ENST00000497415 STRCP1A6NGW2 1772 aa28.05■■■□□ 2.08
RPN1-208ENST00000497415 RIMS2Q9UQ26 1411 aa28.03■■■□□ 2.08
RPN1-208ENST00000497415 CHGAP10645 457 aaKnown RBP28.02■■■□□ 2.08
RPN1-208ENST00000497415 HDGFP51858 240 aaKnown RBP28.01■■■□□ 2.07
RPN1-208ENST00000497415 TRPM2O94759 1503 aa28■■■□□ 2.07
RPN1-208ENST00000497415 SLC4A1APQ9BWU0 796 aaKnown RBP27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms