RNA–Protein interactions for RNA: ENST00000496882.5

SRRM1-220, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-220ENST00000496882 MBD5Q9P267 1494 aa12.27□□□□□ -0.44
SRRM1-220ENST00000496882 ADGBQ8N7X0 1667 aa12.27□□□□□ -0.45
SRRM1-220ENST00000496882 SLC24A1O60721 1099 aa12.27□□□□□ -0.45
SRRM1-220ENST00000496882 ILDR1Q86SU0 546 aaPredicted RBP12.27□□□□□ -0.45
SRRM1-220ENST00000496882 PLXNC1O60486 1568 aa12.26□□□□□ -0.45
SRRM1-220ENST00000496882 C3P01024 1663 aa12.26□□□□□ -0.45
SRRM1-220ENST00000496882 KANK4Q5T7N3 995 aaPredicted RBP12.24□□□□□ -0.45
SRRM1-220ENST00000496882 DHX29Q7Z478 1369 aaKnown RBP12.24□□□□□ -0.45
SRRM1-220ENST00000496882 SETD1BQ9UPS6 1966 aaKnown RBP12.24□□□□□ -0.45
SRRM1-220ENST00000496882 MROH2AA6NES4 1674 aa12.23□□□□□ -0.45
SRRM1-220ENST00000496882 ARHGEF5Q12774 1597 aa12.23□□□□□ -0.45
SRRM1-220ENST00000496882 MYOM3Q5VTT5 1437 aa12.23□□□□□ -0.45
SRRM1-220ENST00000496882 MIA2Q96PC5 1412 aa12.23□□□□□ -0.45
SRRM1-220ENST00000496882 ZMYM3Q14202 1370 aa12.23□□□□□ -0.45
SRRM1-220ENST00000496882 NPATQ14207 1427 aa12.22□□□□□ -0.45
SRRM1-220ENST00000496882 KIF3BO15066 747 aa12.22□□□□□ -0.45
SRRM1-220ENST00000496882 CLTCQ00610 1675 aaKnown RBP12.2□□□□□ -0.46
SRRM1-220ENST00000496882 DCAF8L1A6NGE4 600 aa12.2□□□□□ -0.46
SRRM1-220ENST00000496882 FBXO41Q8TF61 875 aa12.2□□□□□ -0.46
SRRM1-220ENST00000496882 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.18□□□□□ -0.466e-8■■□□□ 12.8
SRRM1-220ENST00000496882 FAM135AQ9P2D6 1515 aa12.17□□□□□ -0.46
SRRM1-220ENST00000496882 WASHC2CQ9Y4E1 1318 aa12.17□□□□□ -0.46
SRRM1-220ENST00000496882 MAST1Q9Y2H9 1570 aa12.16□□□□□ -0.46
SRRM1-220ENST00000496882 KDM5DQ9BY66 1539 aa12.16□□□□□ -0.46
SRRM1-220ENST00000496882 PTPRKQ15262 1439 aa12.15□□□□□ -0.46
SRRM1-220ENST00000496882 PTPN23Q9H3S7 1636 aa12.14□□□□□ -0.47
SRRM1-220ENST00000496882 PTPRTO14522 1441 aa12.13□□□□□ -0.47
SRRM1-220ENST00000496882 CERKQ8TCT0 537 aa12.13□□□□□ -0.47
SRRM1-220ENST00000496882 NCOA1Q15788 1441 aa12.12□□□□□ -0.47
SRRM1-220ENST00000496882 FGD6Q6ZV73 1430 aa12.12□□□□□ -0.47
SRRM1-220ENST00000496882 CAMSAP1Q5T5Y3 1602 aa12.12□□□□□ -0.47
SRRM1-220ENST00000496882 MYO3AQ8NEV4 1616 aa12.12□□□□□ -0.47
SRRM1-220ENST00000496882 TNRQ92752 1358 aa12.12□□□□□ -0.47
SRRM1-220ENST00000496882 SHANK2Q9UPX8 1470 aa12.12□□□□□ -0.47
SRRM1-220ENST00000496882 CEP170BQ9Y4F5 1589 aaPredicted RBP12.12□□□□□ -0.47
SRRM1-220ENST00000496882 STRCQ7RTU9 1775 aa12.12□□□□□ -0.47
SRRM1-220ENST00000496882 DUOX2Q9NRD8 1548 aa12.11□□□□□ -0.47
SRRM1-220ENST00000496882 PZPP20742 1482 aa12.11□□□□□ -0.47
SRRM1-220ENST00000496882 KIF15Q9NS87 1388 aa12.11□□□□□ -0.47
SRRM1-220ENST00000496882 PKD2Q13563 968 aa12.11□□□□□ -0.47
SRRM1-220ENST00000496882 SAMD1Q6SPF0 538 aaPredicted RBP12.11□□□□□ -0.47
SRRM1-220ENST00000496882 EIF2AK4Q9P2K8 1649 aaKnown RBP12.11□□□□□ -0.47
SRRM1-220ENST00000496882 ZNF142P52746 1687 aaPredicted RBP12.1□□□□□ -0.47
SRRM1-220ENST00000496882 A2ML1A8K2U0 1454 aa12.1□□□□□ -0.47
SRRM1-220ENST00000496882 RRP7BPQ9NSQ0 103 aa12.1□□□□□ -0.47
SRRM1-220ENST00000496882 ATF5Q9Y2D1 282 aaPredicted RBP12.1□□□□□ -0.47
SRRM1-220ENST00000496882 ABCC5O15440 1437 aa12.1□□□□□ -0.47
SRRM1-220ENST00000496882 DAPK1P53355 1430 aa12.1□□□□□ -0.47
SRRM1-220ENST00000496882 PLA2R1Q13018 1463 aa12.09□□□□□ -0.47
SRRM1-220ENST00000496882 TCOF1Q13428 1488 aaKnown RBP12.09□□□□□ -0.47
SRRM1-220ENST00000496882 RNF17Q9BXT8 1623 aaKnown RBP12.09□□□□□ -0.47
SRRM1-220ENST00000496882 FAM50AQ14320 339 aaKnown RBP12.09□□□□□ -0.47
SRRM1-220ENST00000496882 FBXO31Q5XUX0 539 aaPredicted RBP12.09□□□□□ -0.47
SRRM1-220ENST00000496882 ZC3H13Q5T200 1668 aaKnown RBP12.09□□□□□ -0.47
SRRM1-220ENST00000496882 KANK1Q14678 1352 aa12.08□□□□□ -0.48
SRRM1-220ENST00000496882 ANKRD30AQ9BXX3 1397 aa12.08□□□□□ -0.48
SRRM1-220ENST00000496882 CROCC2H7BZ55 1655 aa12.08□□□□□ -0.48
SRRM1-220ENST00000496882 ERBINQ96RT1 1412 aa12.08□□□□□ -0.48
SRRM1-220ENST00000496882 NCKAP5LQ9HCH0 1330 aa12.08□□□□□ -0.48
SRRM1-220ENST00000496882 DNMT1P26358 1616 aaKnown RBP12.08□□□□□ -0.48
SRRM1-220ENST00000496882 CHIC2Q9UKJ5 165 aa12.07□□□□□ -0.48
SRRM1-220ENST00000496882 ABCC3O15438 1527 aa12.06□□□□□ -0.48
SRRM1-220ENST00000496882 THEMISQ8N1K5 641 aaPredicted RBP12.06□□□□□ -0.48
SRRM1-220ENST00000496882 NLRP1Q9C000 1473 aa12.06□□□□□ -0.48
SRRM1-220ENST00000496882 ANKLE2Q86XL3 938 aa12.04□□□□□ -0.48
SRRM1-220ENST00000496882 UGGT1Q9NYU2 1555 aa12.03□□□□□ -0.48
SRRM1-220ENST00000496882 PRDM15P57071 1507 aaPredicted RBP12.02□□□□□ -0.48
SRRM1-220ENST00000496882 CEP152O94986 1710 aa12.02□□□□□ -0.49
SRRM1-220ENST00000496882 ERVK-7P63135 1459 aa12.02□□□□□ -0.49
SRRM1-220ENST00000496882 SPATA31D1Q6ZQQ2 1576 aa12.01□□□□□ -0.49
SRRM1-220ENST00000496882 MROH1Q8NDA8 1641 aa12.01□□□□□ -0.49
SRRM1-220ENST00000496882 U3KPZ7 1027 aaPredicted RBP12.01□□□□□ -0.49
SRRM1-220ENST00000496882 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.01□□□□□ -0.49
SRRM1-220ENST00000496882 ADGRL2O95490 1459 aa12□□□□□ -0.49
SRRM1-220ENST00000496882 IQSEC2Q5JU85 1478 aa12□□□□□ -0.49
SRRM1-220ENST00000496882 STAG3Q9UJ98 1225 aa11.99□□□□□ -0.49
SRRM1-220ENST00000496882 ZNF335Q9H4Z2 1342 aaPredicted RBP11.99□□□□□ -0.49
SRRM1-220ENST00000496882 ARHGAP31Q2M1Z3 1444 aa11.99□□□□□ -0.49
SRRM1-220ENST00000496882 LTBP4Q8N2S1 1624 aa11.99□□□□□ -0.49
SRRM1-220ENST00000496882 POLR1AO95602 1720 aaPredicted RBP11.99□□□□□ -0.49
SRRM1-220ENST00000496882 DEPDC5O75140 1603 aa11.97□□□□□ -0.49
SRRM1-220ENST00000496882 ANKRD50Q9ULJ7 1429 aa11.97□□□□□ -0.49
SRRM1-220ENST00000496882 NPHP4O75161 1426 aaPredicted RBP11.96□□□□□ -0.49
SRRM1-220ENST00000496882 ITGAEP38570 1179 aa11.95□□□□□ -0.5
SRRM1-220ENST00000496882 PPARGC1BQ86YN6 1023 aaKnown RBP11.95□□□□□ -0.5
SRRM1-220ENST00000496882 EID1Q9Y6B2 187 aa11.95□□□□□ -0.5
SRRM1-220ENST00000496882 LMTK2Q8IWU2 1503 aa11.95□□□□□ -0.5
SRRM1-220ENST00000496882 CFAP65Q6ZU64 1925 aaKnown RBP11.94□□□□□ -0.5
SRRM1-220ENST00000496882 NEURL4Q96JN8 1562 aa11.94□□□□□ -0.5
SRRM1-220ENST00000496882 UBAP1LF5GYI3 381 aa11.94□□□□□ -0.5
SRRM1-220ENST00000496882 CPS1P31327 1500 aa11.93□□□□□ -0.5
SRRM1-220ENST00000496882 MED14O60244 1454 aa11.93□□□□□ -0.5
SRRM1-220ENST00000496882 ROCK1Q13464 1354 aa11.92□□□□□ -0.5
SRRM1-220ENST00000496882 TXNDC2Q86VQ3 553 aa11.92□□□□□ -0.5
SRRM1-220ENST00000496882 VWDEQ8N2E2 1590 aa11.92□□□□□ -0.5
SRRM1-220ENST00000496882 UBR1Q8IWV7 1749 aa11.91□□□□□ -0.5
SRRM1-220ENST00000496882 EFCAB6Q5THR3 1501 aa11.91□□□□□ -0.5
SRRM1-220ENST00000496882 IQGAP1P46940 1657 aa11.91□□□□□ -0.5
SRRM1-220ENST00000496882 SCAF11Q99590 1463 aaKnown RBP11.91□□□□□ -0.5
SRRM1-220ENST00000496882 SLC52A1Q9NWF4 448 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms