RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 ANO8Q9HCE9 1232 aaPredicted RBP9.04□□□□□ -0.96
SSBP1-213ENST00000496622 FMN1Q68DA7 1419 aa9.04□□□□□ -0.96
SSBP1-213ENST00000496622 VGFO15240 615 aaPredicted RBP9.04□□□□□ -0.96
SSBP1-213ENST00000496622 ZEB1P37275 1124 aaPredicted RBP9.04□□□□□ -0.96
SSBP1-213ENST00000496622 COLQQ9Y215 455 aaPredicted RBP9.04□□□□□ -0.96
SSBP1-213ENST00000496622 TIAM1Q13009 1591 aa9.04□□□□□ -0.96
SSBP1-213ENST00000496622 CASKIN1Q8WXD9 1431 aa9.04□□□□□ -0.96
SSBP1-213ENST00000496622 MTUS2Q5JR59 1369 aa9.03□□□□□ -0.96
SSBP1-213ENST00000496622 SHROOM2Q13796 1616 aa9.03□□□□□ -0.96
SSBP1-213ENST00000496622 EFCAB3Q8N7B9 438 aa9.03□□□□□ -0.96
SSBP1-213ENST00000496622 CTTNBP2Q8WZ74 1663 aa9.02□□□□□ -0.96
SSBP1-213ENST00000496622 POTEFA5A3E0 1075 aa9.02□□□□□ -0.96
SSBP1-213ENST00000496622 IQGAP2Q13576 1575 aa9.02□□□□□ -0.97
SSBP1-213ENST00000496622 CLCN6P51797 869 aa9.02□□□□□ -0.97
SSBP1-213ENST00000496622 POTEB2H3BUK9 544 aa9.01□□□□□ -0.97
SSBP1-213ENST00000496622 EFCAB5A4FU69 1503 aa9.01□□□□□ -0.97
SSBP1-213ENST00000496622 KIAA0586Q9BVV6 1533 aa9.01□□□□□ -0.97
SSBP1-213ENST00000496622 METRNQ9UJH8 293 aa9.01□□□□□ -0.97
SSBP1-213ENST00000496622 RRBP1Q9P2E9 1410 aaKnown RBP9□□□□□ -0.97
SSBP1-213ENST00000496622 FYCO1Q9BQS8 1478 aa9□□□□□ -0.97
SSBP1-213ENST00000496622 DISP1Q96F81 1524 aa8.99□□□□□ -0.97
SSBP1-213ENST00000496622 CDK13Q14004 1512 aaKnown RBP8.99□□□□□ -0.97
SSBP1-213ENST00000496622 SAMD9Q5K651 1589 aa8.99□□□□□ -0.97
SSBP1-213ENST00000496622 NUP160Q12769 1436 aa8.99□□□□□ -0.97
SSBP1-213ENST00000496622 NKX1-1Q15270 411 aaPredicted RBP8.99□□□□□ -0.97
SSBP1-213ENST00000496622 CHIC2Q9UKJ5 165 aa8.99□□□□□ -0.97
SSBP1-213ENST00000496622 CEP170Q5SW79 1584 aa8.98□□□□□ -0.97
SSBP1-213ENST00000496622 DIP2BQ9P265 1576 aa8.98□□□□□ -0.97
SSBP1-213ENST00000496622 PLB1Q6P1J6 1458 aa8.98□□□□□ -0.97
SSBP1-213ENST00000496622 DPY19L2Q6NUT2 758 aa8.98□□□□□ -0.97
SSBP1-213ENST00000496622 ANP32EQ9BTT0 268 aa8.98□□□□□ -0.97
SSBP1-213ENST00000496622 MAGI3Q5TCQ9 1506 aa8.97□□□□□ -0.97
SSBP1-213ENST00000496622 GOLGA2Q08379 1002 aa8.97□□□□□ -0.97
SSBP1-213ENST00000496622 ZNF644Q9H582 1327 aaPredicted RBP8.96□□□□□ -0.98
SSBP1-213ENST00000496622 PKNOX2Q96KN3 472 aa8.96□□□□□ -0.98
SSBP1-213ENST00000496622 PHF8Q9UPP1 1060 aa8.96□□□□□ -0.98
SSBP1-213ENST00000496622 RAB3GAP2Q9H2M9 1393 aa8.94□□□□□ -0.98
SSBP1-213ENST00000496622 LTBP4Q8N2S1 1624 aa8.94□□□□□ -0.98
SSBP1-213ENST00000496622 MAPKBP1O60336 1514 aa8.94□□□□□ -0.98
SSBP1-213ENST00000496622 EPRSP07814 1512 aaKnown RBP8.94□□□□□ -0.98
SSBP1-213ENST00000496622 UGGT2Q9NYU1 1516 aa8.94□□□□□ -0.98
SSBP1-213ENST00000496622 POTEJP0CG39 1038 aa8.94□□□□□ -0.98
SSBP1-213ENST00000496622 NCOA2Q15596 1464 aa8.94□□□□□ -0.98
SSBP1-213ENST00000496622 MAP3K1Q13233 1512 aa8.94□□□□□ -0.98
SSBP1-213ENST00000496622 MKRN3Q13064 507 aaKnown RBP8.94□□□□□ -0.98
SSBP1-213ENST00000496622 MFRPQ9BY79 579 aa8.94□□□□□ -0.98
SSBP1-213ENST00000496622 RRP7BPQ9NSQ0 103 aa8.94□□□□□ -0.98
SSBP1-213ENST00000496622 DHX57Q6P158 1386 aaKnown RBP8.94□□□□□ -0.98
SSBP1-213ENST00000496622 HS6ST3Q8IZP7 471 aa8.93□□□□□ -0.98
SSBP1-213ENST00000496622 ZNF777Q9ULD5 760 aaPredicted RBP8.93□□□□□ -0.98
SSBP1-213ENST00000496622 PTPRKQ15262 1439 aa8.93□□□□□ -0.98
SSBP1-213ENST00000496622 PRG4Q92954 1404 aaPredicted RBP8.93□□□□□ -0.98
SSBP1-213ENST00000496622 LRRIQ1Q96JM4 1722 aa8.93□□□□□ -0.98
SSBP1-213ENST00000496622 SLC34A2O95436 690 aa8.93□□□□□ -0.98
SSBP1-213ENST00000496622 IRX5P78411 483 aaPredicted RBP8.93□□□□□ -0.98
SSBP1-213ENST00000496622 PDCD7Q8N8D1 485 aaKnown RBP8.93□□□□□ -0.98
SSBP1-213ENST00000496622 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.93□□□□□ -0.98
SSBP1-213ENST00000496622 SEC24BO95487 1268 aa8.92□□□□□ -0.98
SSBP1-213ENST00000496622 FGD6Q6ZV73 1430 aa8.92□□□□□ -0.98
SSBP1-213ENST00000496622 NUP153P49790 1475 aaKnown RBP8.92□□□□□ -0.98
SSBP1-213ENST00000496622 FAM69CQ0P6D2 419 aa8.92□□□□□ -0.98
SSBP1-213ENST00000496622 MS4A4AQ96JQ5 239 aa8.92□□□□□ -0.98
SSBP1-213ENST00000496622 KIAA0556O60303 1618 aa8.91□□□□□ -0.98
SSBP1-213ENST00000496622 TULP1O00294 542 aaPredicted RBP8.91□□□□□ -0.98
SSBP1-213ENST00000496622 NEUROD1Q13562 356 aa8.91□□□□□ -0.98
SSBP1-213ENST00000496622 SIN3AQ96ST3 1273 aa8.91□□□□□ -0.98
SSBP1-213ENST00000496622 SLC39A7Q92504 469 aa8.9□□□□□ -0.98
SSBP1-213ENST00000496622 CARMIL2Q6F5E8 1435 aa8.9□□□□□ -0.98
SSBP1-213ENST00000496622 CFAP43Q8NDM7 1665 aa8.9□□□□□ -0.99
SSBP1-213ENST00000496622 C7P10643 843 aa8.89□□□□□ -0.99
SSBP1-213ENST00000496622 PTPRGP23470 1445 aa8.89□□□□□ -0.99
SSBP1-213ENST00000496622 MYOM3Q5VTT5 1437 aa8.88□□□□□ -0.99
SSBP1-213ENST00000496622 PPP1R37O75864 691 aa8.88□□□□□ -0.99
SSBP1-213ENST00000496622 PDIA4P13667 645 aaKnown RBP8.88□□□□□ -0.99
SSBP1-213ENST00000496622 KCNH8Q96L42 1107 aa8.88□□□□□ -0.99
SSBP1-213ENST00000496622 SETD5Q9C0A6 1442 aa8.87□□□□□ -0.99
SSBP1-213ENST00000496622 CDK11AQ9UQ88 783 aaPredicted RBP8.87□□□□□ -0.99
SSBP1-213ENST00000496622 PLEKHD1A6NEE1 506 aa8.87□□□□□ -0.99
SSBP1-213ENST00000496622 FBXO22Q8NEZ5 403 aa8.86□□□□□ -0.99
SSBP1-213ENST00000496622 PLCG2P16885 1265 aa8.86□□□□□ -0.99
SSBP1-213ENST00000496622 OCEL1Q9H607 264 aa8.86□□□□□ -0.99
SSBP1-213ENST00000496622 CFDP1Q9UEE9 299 aaPredicted RBP8.86□□□□□ -0.99
SSBP1-213ENST00000496622 CCDC18Q5T9S5 1454 aa8.85□□□□□ -0.99
SSBP1-213ENST00000496622 TAOK2Q9UL54 1235 aa8.85□□□□□ -0.99
SSBP1-213ENST00000496622 HECW1Q76N89 1606 aa8.85□□□□□ -0.99
SSBP1-213ENST00000496622 ATP10BO94823 1461 aa8.84□□□□□ -0.99
SSBP1-213ENST00000496622 EHBP1L1Q8N3D4 1523 aa8.84□□□□□ -0.99
SSBP1-213ENST00000496622 IER5LQ5T953 404 aa8.84□□□□□ -0.99
SSBP1-213ENST00000496622 TRIM52Q96A61 297 aa8.84□□□□□ -1
SSBP1-213ENST00000496622 RAPGEF6Q8TEU7 1601 aa8.83□□□□□ -1
SSBP1-213ENST00000496622 PTPRMP28827 1452 aa8.82□□□□□ -1
SSBP1-213ENST00000496622 PDE4CQ08493 712 aa8.82□□□□□ -1
SSBP1-213ENST00000496622 LHX8Q68G74 356 aa8.82□□□□□ -1
SSBP1-213ENST00000496622 ACIN1Q9UKV3 1341 aaKnown RBP8.81□□□□□ -1
SSBP1-213ENST00000496622 GTPBP6O43824 516 aaPredicted RBP8.81□□□□□ -1
SSBP1-213ENST00000496622 HNRNPMP52272 730 aaKnown RBP eCLIP8.81□□□□□ -1
SSBP1-213ENST00000496622 DIEXFQ68CQ4 756 aaKnown RBP8.81□□□□□ -1
SSBP1-213ENST00000496622 GTF3C3Q9Y5Q9 886 aa8.81□□□□□ -1
SSBP1-213ENST00000496622 SUPT6HQ7KZ85 1726 aaKnown RBP8.81□□□□□ -1
SSBP1-213ENST00000496622 TROQ12816 1431 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms